Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 3.6e-42 174.5 87 100.0
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.3e-31 139.4 81 81.5
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 1.9e-30 135.6 84 77.4
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 1.6e-29 132.5 79 79.7
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.0e-29 130.6 81 80.2
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 1.0e-28 129.8 86 74.4
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.3e-28 129.4 80 72.5
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 1.7e-28 129.0 85 71.8
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 3.9e-28 127.9 74 78.4
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 3.9e-28 127.9 86 69.8
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 6.6e-28 127.1 83 71.1
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 8.6e-28 126.7 80 75.0
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 8.6e-28 126.7 87 67.8
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 1.1e-27 126.3 80 71.2
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 1.9e-27 125.6 81 69.1
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 1.9e-27 125.6 85 70.6
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 2.5e-27 125.2 80 73.8
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 2.5e-27 125.2 86 68.6
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 3.3e-27 124.8 81 75.3
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 5.6e-27 124.0 86 69.8
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 7.3e-27 123.6 86 69.8
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 9.5e-27 123.2 84 69.0
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 1.2e-26 122.9 81 69.1
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 1.6e-26 122.5 86 67.4
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.6e-26 122.5 82 68.3
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.6e-26 122.5 82 68.3
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 2.1e-26 122.1 86 66.3
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 2.1e-26 122.1 82 70.7
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 2.8e-26 121.7 85 65.9
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 2.8e-26 121.7 79 69.6
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 2.8e-26 121.7 77 72.7
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 4.7e-26 120.9 79 70.9
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 4.7e-26 120.9 80 66.2
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 8.1e-26 120.2 81 67.9
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 1.1e-25 119.8 81 67.9
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 1.1e-25 119.8 81 70.4
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 1.1e-25 119.8 81 70.4
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 1.1e-25 119.8 80 71.2
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 1.4e-25 119.4 84 64.3
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 1.4e-25 119.4 79 69.6
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 1.8e-25 119.0 83 65.1
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 1.8e-25 119.0 81 69.1
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 4.0e-25 117.9 80 68.8
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 4.0e-25 117.9 81 66.7
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 6.8e-25 117.1 77 71.4
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 1.2e-24 116.3 80 66.2
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 1.2e-24 116.3 80 66.2
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 1.2e-24 116.3 81 71.6
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 2.0e-24 115.5 80 66.2
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 3.4e-24 114.8 76 61.8
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 5.8e-24 114.0 79 68.4
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 7.5e-24 113.6 80 65.0
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 7.5e-24 113.6 80 65.0
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 7.5e-24 113.6 80 65.0
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 7.5e-24 113.6 79 67.1
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 7.5e-24 113.6 79 67.1
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 2.2e-23 112.1 74 68.9
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 1.1e-22 109.8 76 57.9
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 5.4e-22 107.5 84 61.9
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 5.4e-22 107.5 81 61.7
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 9.2e-22 106.7 81 61.7
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 3.0e-20 101.7 80 63.8
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 8.6e-20 100.1 81 61.7
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 4.3e-19 97.8 78 61.5
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 7.3e-19 97.1 80 60.0
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 7.3e-19 97.1 55 76.4
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 2.8e-18 95.1 74 60.8
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 3.6e-18 94.7 81 56.8
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 3.6e-18 94.7 80 60.0
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 1.1e-17 93.2 80 58.8
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 1.4e-17 92.8 81 55.6
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 7.1e-14 80.5 49 63.3
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 7.8e-13 77.0 55 61.8
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 4.8e-10 67.8 74 47.3
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 7.6e-08 60.5 79 36.7
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 2.2e-07 58.9 82 39.0
FAN12G0891 Fragaria x ananassa HOM05D007940 ORTHO05D010046 8.4e-07 57.0 51 52.9
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 8.4e-07 57.0 51 52.9
FAN03G3294 Fragaria x ananassa HOM05D004346 ORTHO05D005153 2.4e-06 55.5 35 68.6
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 2.4e-06 55.5 36 63.9
FAN20G1268 Fragaria x ananassa HOM05D007940 ORTHO05D010046 3.2e-06 55.1 35 68.6


User provided reference genes

Program Settings