Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 9.2e-49 196.4 90 100.0
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 8.9e-44 179.9 90 90.0
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 2.1e-37 158.7 90 78.9
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 2.8e-37 158.3 90 78.9
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 4.9e-34 147.5 90 75.6
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 6.4e-34 147.1 90 75.6
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 1.1e-33 146.4 90 74.4
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 1.4e-33 146.0 90 75.6
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.9e-33 145.6 90 73.3
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 1.2e-32 142.9 90 71.1
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 1.6e-32 142.5 90 71.1
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 3.5e-32 141.4 90 68.9
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 4.6e-32 141.0 88 71.6
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 4.6e-32 141.0 90 73.3
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 1.0e-31 139.8 90 68.9
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.0e-31 139.8 90 70.0
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.3e-31 139.4 92 70.7
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 1.3e-31 139.4 90 73.3
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 1.7e-31 139.0 90 72.2
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.7e-31 139.0 88 71.6
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.3e-31 138.7 90 72.2
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 3.0e-31 138.3 90 71.1
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 3.0e-31 138.3 88 71.6
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 6.6e-31 137.1 88 70.5
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 8.6e-31 136.7 89 67.4
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.1e-30 136.3 90 71.1
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.1e-30 136.3 90 71.1
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.5e-30 136.0 89 67.4
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 1.9e-30 135.6 90 70.0
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 3.3e-30 134.8 88 70.5
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 3.3e-30 134.8 89 67.4
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 4.3e-30 134.4 92 68.5
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 4.3e-30 134.4 90 66.7
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 5.6e-30 134.0 88 67.0
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.2e-29 132.9 90 67.8
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.2e-29 132.9 90 67.8
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.6e-29 132.5 90 67.8
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 1.6e-29 132.5 90 68.9
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 2.1e-29 132.1 90 67.8
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 2.1e-29 132.1 90 68.9
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 3.6e-29 131.3 90 68.9
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 3.6e-29 131.3 87 69.0
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 4.7e-29 131.0 90 64.4
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 4.7e-29 131.0 88 67.0
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 8.1e-29 130.2 88 69.3
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 8.1e-29 130.2 90 64.4
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.1e-28 129.8 89 69.7
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 1.4e-28 129.4 90 67.8
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 2.3e-28 128.6 87 65.5
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 2.3e-28 128.6 89 68.5
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.3e-28 128.6 90 65.6
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 3.1e-28 128.3 87 67.8
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 3.1e-28 128.3 87 67.8
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 4.0e-28 127.9 88 65.9
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 5.2e-28 127.5 90 64.4
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.2e-28 127.5 90 66.7
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.2e-28 127.5 90 66.7
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 6.8e-28 127.1 90 64.4
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 8.9e-28 126.7 87 65.5
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.5e-27 125.9 90 64.4
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.5e-27 125.9 87 65.5
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 2.0e-27 125.6 88 63.6
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 2.6e-27 125.2 88 67.0
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 3.4e-27 124.8 90 63.3
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 4.4e-27 124.4 90 63.3
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 4.4e-27 124.4 90 63.3
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 4.4e-27 124.4 90 63.3
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 4.4e-27 124.4 90 63.3
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 4.4e-27 124.4 90 63.3
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 5.8e-27 124.0 90 65.6
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 7.5e-27 123.6 88 65.9
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 7.5e-27 123.6 90 63.3
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 7.5e-27 123.6 91 68.1
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 9.9e-27 123.2 87 62.1
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.3e-26 122.9 87 65.5
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 1.7e-26 122.5 87 64.4
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 2.9e-26 121.7 90 63.3
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 2.9e-26 121.7 90 63.3
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 2.9e-26 121.7 90 63.3
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 2.9e-26 121.7 90 63.3
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.9e-26 121.7 90 63.3
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 4.9e-26 120.9 90 62.2
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 4.9e-26 120.9 90 64.4
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 4.9e-26 120.9 87 63.2
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 6.4e-26 120.6 90 63.3
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 8.3e-26 120.2 88 64.8
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 8.3e-26 120.2 90 61.1
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 1.1e-25 119.8 90 62.2
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 1.1e-25 119.8 90 62.2
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.1e-25 119.8 90 62.2
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 1.4e-25 119.4 87 58.6
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 2.4e-25 118.6 87 63.2
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 2.4e-25 118.6 92 62.0
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 3.2e-25 118.2 90 61.1
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.2e-25 118.2 88 63.6
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.2e-25 118.2 88 63.6
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.2e-25 118.2 88 63.6
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 3.2e-25 118.2 90 63.3
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 4.1e-25 117.9 90 60.0
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 4.1e-25 117.9 90 62.2
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 5.4e-25 117.5 91 61.5
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 7.1e-25 117.1 90 62.2
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 9.2e-25 116.7 89 59.6
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 1.2e-24 116.3 89 60.7
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 1.6e-24 115.9 82 64.6
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.6e-24 115.9 87 63.2
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.7e-24 115.2 87 63.2
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 4.6e-24 114.4 91 59.3
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 4.6e-24 114.4 91 59.3
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.6e-24 114.4 88 62.5
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 4.6e-24 114.4 88 60.2
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 7.8e-24 113.6 87 60.9
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 1.0e-23 113.2 88 59.1
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 2.3e-23 112.1 88 61.4
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 2.3e-23 112.1 88 61.4
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 5.1e-23 110.9 88 59.1
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.3e-22 107.1 90 58.9
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 2.6e-19 98.6 65 67.7
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 5.8e-19 97.4 76 60.5
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.8e-19 97.4 65 67.7
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 3.8e-18 94.7 85 51.8
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 3.8e-18 94.7 90 53.3
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 7.8e-16 87.0 83 51.8
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 2.5e-14 82.0 88 45.5
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 5.6e-14 80.9 59 61.0
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 5.6e-14 80.9 62 59.7
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 2.8e-13 78.6 77 51.9
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 3.1e-12 75.1 57 57.9
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 2.9e-10 68.6 68 52.9
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 1.4e-09 66.2 67 52.2
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.1e-08 62.4 45 60.0
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 1.3e-07 59.7 49 53.1
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 2.3e-07 58.9 82 36.6
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 2.3e-07 58.9 43 55.8
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 3.0e-07 58.5 71 40.8
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 3.0e-07 58.5 71 40.8
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 5.1e-07 57.8 79 39.2
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 5.1e-07 57.8 79 39.2
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 5.6e-06 54.3 43 51.2
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 5.6e-06 54.3 43 51.2


User provided reference genes

Program Settings