Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p011849 Quercus lobata HOM05D008511 ORTHO05D010691 5.9e-141 504.2 257 100.0
CiPaw.10G106900 Carya illinoinensis HOM05D008511 ORTHO05D010691 8.0e-90 334.3 257 68.1
Haze_05233 Corylus avellana HOM05D008511 ORTHO05D010691 8.9e-89 330.9 261 69.0
Prupe.4G119000 Prunus persica HOM05D008511 ORTHO05D010691 7.3e-75 284.6 246 64.2
FvH4_3g13150 Fragaria vesca HOM05D008511 ORTHO05D010691 4.0e-73 278.9 251 63.3
RcHm_v2.0_Chr5g0021391 Rosa chinensis HOM05D008511 ORTHO05D010691 6.8e-73 278.1 249 61.8
MD05G1244600 Malus domestica HOM05D008511 ORTHO05D010691 1.1e-67 260.8 224 64.3
FAN21G0240 Fragaria x ananassa HOM05D008511 ORTHO05D010691 2.0e-64 250.0 218 63.8
FAN16G0518 Fragaria x ananassa HOM05D008511 ORTHO05D010691 2.3e-60 236.5 222 63.1
CANSAT35G2052 Cannabis sativa HOM05D008511 ORTHO05D010691 6.6e-60 235.0 234 58.5
Manes.03G071600 Manihot esculenta HOM05D008511 ORTHO05D010691 7.3e-59 231.5 225 55.6
Potri.001G075700 Populus trichocarpa HOM05D008511 ORTHO05D010691 2.8e-58 229.6 260 53.5
Cpa.g.sc30.92 Carica papaya HOM05D008511 ORTHO05D010691 3.6e-58 229.2 202 59.4
TAR624G0648 Trochodendron aralioides HOM05D008511 ORTHO05D010691 1.8e-57 226.9 252 54.4
Thecc.02G002800 Theobroma cacao HOM05D008511 ORTHO05D010691 4.0e-57 225.7 255 54.9
Dinv31195 Davidia involucrata HOM05D008511 ORTHO05D010691 6.9e-57 224.9 243 55.1
CsaV3_1G010050 Cucumis sativus L. HOM05D008511 ORTHO05D010691 3.8e-55 219.2 231 53.2
TWI38G1802 Tripterygium wilfordii HOM05D008511 ORTHO05D010691 5.4e-54 215.3 234 53.0
Atru.chr10.265 Acer truncatum HOM05D008511 ORTHO05D010691 3.9e-52 209.1 225 51.6
Nitab4.5_0000844g0310 Nicotiana tabacum HOM05D008511 ORTHO05D010691 9.6e-51 204.5 240 49.2
Nitab4.5_0000632g0180 Nicotiana tabacum HOM05D008511 ORTHO05D010691 5.3e-49 198.7 241 48.5
Gohir.A12G050000 Gossypium hirsutum HOM05D008511 ORTHO05D010691 6.9e-49 198.4 252 50.8
CAN.G809.39 Capsicum annuum HOM05D008511 ORTHO05D010691 1.2e-48 197.6 247 49.0
Duzib132G0693 Durio zibethinus HOM05D008511 ORTHO05D010691 1.2e-48 197.6 263 49.8
Sed0008274 Sechium edule HOM05D008511 ORTHO05D010691 2.0e-48 196.8 206 51.9
Nn7g38379 Nelumbo nucifera HOM05D008511 ORTHO05D010691 5.8e-48 195.3 182 58.2
ClCG03G004120 Citrullus lanatus HOM05D008511 ORTHO05D010691 1.3e-47 194.1 245 50.2
Aqoxy2G01550 Aquilegia oxysepala HOM05D008511 ORTHO05D010691 4.9e-47 192.2 249 47.8
Gohir.D12G048400 Gossypium hirsutum HOM05D008511 ORTHO05D010691 1.3e-44 184.1 251 48.2
Gorai.008G051400 Gossypium raimondii HOM05D008511 ORTHO05D010691 1.9e-43 180.3 252 47.6
DCAR_007773 Daucus carota HOM05D008511 ORTHO05D010691 2.6e-40 169.9 225 45.3
Oeu010662.1 Olea europaea HOM05D008511 ORTHO05D010691 1.7e-39 167.2 218 46.8
Sc24g0002900 Simmondsia chinensis HOM05D008511 ORTHO05D010691 2.2e-39 166.8 230 44.8
Cfa001274 Carpinus fangiana HOM05D008511 ORTHO05D010691 4.9e-39 165.6 118 72.0
SGA_v2.0_scaffold168G38543 Striga asiatica HOM05D008511 ORTHO05D010691 2.5e-38 163.3 232 42.7
MBI02_g25824_MAGBIO Magnolia biondii HOM05D008511 ORTHO05D010691 3.5e-37 159.5 242 44.2
arahy.Tifrunner.gnm1.ann1.5RH3SU Arachis hypogaea HOM05D008511 ORTHO05D010691 3.3e-35 152.9 254 39.0
arahy.Tifrunner.gnm1.ann1.LWVG2R Arachis hypogaea HOM05D008511 ORTHO05D010691 4.3e-35 152.5 257 39.7
Migut.D01193 Erythranthe guttata HOM05D008511 ORTHO05D010691 4.3e-35 152.5 222 41.0
Ca_01975_v3 Cicer arietinum L. HOM05D008511 ORTHO05D010691 7.4e-35 151.8 259 39.0
HPP92_009504 Vanilla planifolia HOM05D008511 ORTHO05D010691 9.3e-30 134.8 234 35.9
Sabra01G0053200 Salix brachista HOM05D008511 ORTHO05D010691 1.8e-28 130.6 123 55.3
Sopen02g026560 Solanum pennellii HOM05D008511 ORTHO05D010691 2.3e-28 130.2 122 51.6
COL.COLO4_16225 Corchorus olitorius HOM05D008511 ORTHO05D010691 3.1e-25 119.8 124 47.6
Solyc02g081930.3 Solanum lycopersicum HOM05D008511 ORTHO05D010691 1.1e-19 101.3 159 43.4
ATR0763G254 Amborella trichopoda HOM05D008511 ORTHO05D010691 2.6e-19 100.1 160 36.9
PGSC0003DMG402007333 Solanum tuberosum HOM05D008511 ORTHO05D010691 6.1e-13 79.0 75 58.7
SalBow3G2667 Salvia bowleyana HOM05D008511 ORTHO05D010691 1.8e-09 67.4 108 41.7


User provided reference genes

Program Settings