Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 2.5e-94 349.0 205 100.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 3.1e-60 235.7 216 69.9
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.2e-57 225.3 139 84.2
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 5.5e-57 224.9 205 70.2
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 6.7e-55 218.0 205 69.8
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 6.7e-55 218.0 205 69.8
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.1e-54 217.2 146 80.8
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 1.5e-54 216.9 162 75.3
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.5e-54 216.9 140 82.1
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 5.7e-54 214.9 205 65.4
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 1.3e-53 213.8 209 65.1
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 1.6e-53 213.4 144 77.8
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.6e-53 213.4 216 63.4
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 3.7e-53 212.2 211 66.4
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 4.8e-53 211.8 159 73.0
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.4e-52 209.5 200 65.5
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.1e-52 208.8 209 60.8
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 4.1e-52 208.8 158 74.1
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 5.3e-52 208.4 208 67.8
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 9.1e-52 207.6 168 68.5
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 2.6e-51 206.1 213 62.0
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 3.4e-51 205.7 141 78.0
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.4e-51 205.7 149 76.5
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 3.4e-51 205.7 149 76.5
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 4.5e-51 205.3 167 68.3
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 1.0e-50 204.1 150 75.3
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.3e-50 203.8 152 72.4
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-50 203.8 152 72.4
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 1.3e-50 203.8 203 65.0
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.7e-50 203.4 135 77.0
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.7e-50 203.4 132 80.3
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.2e-50 203.0 135 77.0
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.2e-50 203.0 152 72.4
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.2e-50 203.0 215 63.7
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 2.2e-50 203.0 152 71.7
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.9e-50 202.6 148 73.0
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.8e-50 202.2 209 66.5
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 6.5e-50 201.4 138 78.3
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.4e-49 200.3 136 78.7
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.4e-49 200.3 152 71.1
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 1.4e-49 200.3 134 79.1
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.9e-49 199.9 214 59.3
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 2.5e-49 199.5 135 76.3
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 2.5e-49 199.5 140 76.4
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 3.2e-49 199.1 210 57.1
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 7.2e-49 198.0 147 72.1
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 9.4e-49 197.6 157 66.2
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 1.2e-48 197.2 215 57.2
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.2e-48 197.2 167 65.3
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.6e-48 196.8 157 70.7
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 2.7e-48 196.1 134 77.6
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.6e-48 195.3 206 59.7
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 6.1e-48 194.9 160 70.6
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.0e-47 194.1 136 72.8
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.3e-47 193.0 192 58.9
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 3.0e-47 192.6 179 62.6
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 3.9e-47 192.2 165 65.5
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 5.1e-47 191.8 153 69.9
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 6.7e-47 191.4 138 73.9
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 2.0e-46 189.9 207 57.5
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 2.6e-46 189.5 206 58.7
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 2.6e-46 189.5 134 76.1
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 3.3e-46 189.1 153 68.0
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 7.4e-46 188.0 152 69.1
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.8e-44 183.3 206 61.2
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 6.9e-44 181.4 168 61.9
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 7.7e-43 177.9 177 57.1
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 7.7e-43 177.9 154 65.6
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 7.7e-43 177.9 132 71.2
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 7.7e-43 177.9 153 62.7
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 1.0e-42 177.6 210 55.2
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.7e-42 176.8 158 63.3
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.7e-42 176.8 127 71.7
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 2.2e-42 176.4 132 70.5
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 2.9e-42 176.0 132 69.7
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 3.8e-42 175.6 138 68.8
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 5.0e-42 175.3 149 65.1
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.1e-41 174.1 141 66.7
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.1e-41 174.1 140 66.4
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.9e-41 173.3 136 70.6
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 2.5e-41 172.9 150 62.7
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.2e-41 172.2 136 66.9
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 7.2e-41 171.4 208 55.8
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 7.2e-41 171.4 172 58.1
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.6e-40 170.2 136 66.9
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 4.7e-40 168.7 131 71.0
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 7.9e-40 167.9 188 55.3
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 7.9e-40 167.9 132 68.2
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-39 167.2 132 68.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.0e-39 166.0 209 58.4
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 5.2e-39 165.2 141 61.7
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 5.2e-39 165.2 149 59.7
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-38 164.1 149 59.1
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.1e-38 164.1 149 59.1
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 2.6e-38 162.9 174 54.6
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 4.4e-38 162.2 149 58.4
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 2.8e-37 159.5 230 50.9
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 2.8e-37 159.5 230 50.9
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 2.8e-37 159.5 230 50.9
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 8.2e-37 157.9 149 61.7
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 1.1e-36 157.5 232 52.2
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-36 157.5 154 57.8
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.4e-36 157.1 154 57.8
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-36 156.8 245 49.4
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.8e-36 156.8 241 51.0
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.0e-35 153.3 136 64.0
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.0e-35 153.3 146 59.6
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 3.5e-35 152.5 132 62.9
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-34 149.8 145 60.0
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.8e-34 149.1 197 49.2
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 8.5e-34 147.9 181 51.4
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.5e-34 147.9 103 73.8
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.7e-32 142.9 167 53.3
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.4e-31 140.6 150 56.0
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.4e-31 140.6 214 48.1
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.4e-31 140.6 214 48.1
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 6.7e-31 138.3 157 53.5
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 6.7e-31 138.3 157 53.5
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 3.3e-30 136.0 218 47.7
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 5.7e-30 135.2 208 46.6
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 9.7e-30 134.4 200 46.5
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 1.7e-29 133.7 218 47.2
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 6.3e-29 131.7 203 46.8
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 6.3e-29 131.7 203 46.8
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 6.3e-29 131.7 203 46.8
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.2e-29 131.3 213 48.4
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-27 126.3 176 51.7
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.7e-27 126.3 161 50.9
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 3.5e-27 125.9 107 61.7
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 5.9e-27 125.2 136 58.8
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 5.9e-27 125.2 115 61.7
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 6.5e-26 121.7 158 50.6
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 3.2e-25 119.4 222 45.0
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.8e-23 113.6 136 51.5
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 5.2e-23 112.1 158 48.1
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 4.1e-20 102.4 102 58.8
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 9.5e-17 91.3 68 72.1
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 4.3e-09 65.9 55 60.0
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.2e-08 64.3 151 37.1
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 4.0e-07 59.3 74 51.4


User provided reference genes

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