Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 4.5e-149 531.2 258 100.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.3e-84 317.0 270 61.9
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 3.9e-84 315.5 244 64.8
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.7e-82 308.5 238 63.4
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.4e-81 307.0 254 63.8
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.4e-80 302.0 222 68.0
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 9.9e-80 300.8 202 71.3
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.3e-79 300.4 224 66.5
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 2.2e-79 299.7 260 59.6
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 2.9e-79 299.3 244 63.9
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 8.4e-79 297.7 226 65.0
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 7.1e-78 294.7 237 61.6
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.7e-77 292.7 226 64.6
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.5e-77 292.4 237 62.9
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 4.6e-77 292.0 213 68.1
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 4.6e-77 292.0 237 62.9
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 4.6e-77 292.0 195 69.7
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 6.0e-77 291.6 237 62.4
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.7e-76 290.0 232 64.7
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 2.3e-76 289.7 260 60.0
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 3.9e-76 288.9 259 58.7
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.1e-76 288.5 259 59.1
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 6.6e-76 288.1 260 62.3
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 6.6e-76 288.1 225 64.4
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 8.7e-76 287.7 228 63.6
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 8.7e-76 287.7 225 64.4
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.9e-75 286.6 271 60.5
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.3e-75 285.4 259 58.7
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 3.6e-74 282.3 251 59.4
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 6.2e-74 281.6 255 59.6
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 1.4e-73 280.4 196 69.9
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.4e-73 280.4 229 61.6
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 2.4e-73 279.6 225 61.3
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 3.1e-73 279.3 198 66.2
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 3.1e-73 279.3 222 63.5
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 5.3e-73 278.5 195 66.2
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.2e-72 277.3 228 58.8
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.2e-72 277.3 259 56.8
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 1.5e-72 276.9 232 60.8
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.0e-72 276.6 233 59.2
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.6e-72 276.2 226 62.8
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 5.8e-72 275.0 237 61.6
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.7e-71 273.5 227 57.7
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 4.9e-71 271.9 216 61.1
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.1e-70 270.8 238 58.4
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.9e-70 270.0 243 57.6
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 3.2e-70 269.2 215 60.5
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 9.3e-70 267.7 200 64.0
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 9.3e-70 267.7 200 64.0
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 4.6e-69 265.4 226 58.8
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 3.0e-68 262.7 255 57.3
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 6.6e-68 261.5 258 55.4
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 8.7e-68 261.2 201 64.2
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.9e-67 260.0 221 55.7
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 3.3e-67 259.2 184 64.7
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 4.3e-67 258.8 247 53.8
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 9.6e-67 257.7 174 77.0
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 2.1e-66 256.5 210 66.2
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 2.8e-66 256.1 203 61.6
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 3.6e-66 255.8 199 60.8
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 4.8e-66 255.4 231 53.7
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 6.2e-66 255.0 220 59.5
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 6.2e-66 255.0 206 61.7
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 8.1e-66 254.6 251 55.4
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.4e-65 253.1 259 54.1
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 3.1e-65 252.7 216 57.9
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 5.3e-65 251.9 198 59.6
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 9.0e-65 251.1 224 58.5
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.5e-64 250.4 251 51.8
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 3.4e-64 249.2 228 57.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.3e-63 247.3 191 60.2
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.3e-63 247.3 240 53.3
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 4.9e-63 245.4 240 53.3
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.1e-62 244.2 191 59.7
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.4e-62 243.8 248 52.8
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 1.2e-61 240.7 257 51.0
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.6e-58 230.3 196 58.7
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 5.3e-57 225.3 241 52.3
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 4.5e-56 222.2 256 49.2
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 4.6e-53 212.2 191 55.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.3e-52 209.9 194 54.6
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 2.5e-51 206.5 192 55.7
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.1e-50 203.4 370 35.7
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 4.8e-50 202.2 193 53.9
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 4.8e-50 202.2 201 48.8
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 3.1e-49 199.5 171 53.8
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.5e-40 170.6 125 68.8
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.0e-40 170.2 148 51.4
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.1e-33 147.9 163 50.9
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.4e-33 147.5 118 57.6
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.6e-32 143.3 119 57.1
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 2.2e-31 140.2 176 44.9
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 1.4e-30 137.5 119 58.0
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 8.5e-23 111.7 136 47.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.8e-20 104.0 132 47.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 5.3e-17 92.4 59 71.2
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.3e-15 87.8 78 53.8
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 2.2e-15 87.0 66 63.6
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 6.1e-13 79.0 96 47.9
FAN23G0455 Fragaria x ananassa HOM05D022609 ORTHO05D001690 4.2e-06 56.2 46 63.0


User provided reference genes

Program Settings