Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p009514 Quercus lobata HOM05D000068 ORTHO05D007185 1.4e-41 172.6 90 100.0
QL11p009577 Quercus lobata HOM05D000068 ORTHO05D007185 1.4e-33 146.0 84 91.7
Sed0013598 Sechium edule HOM05D000068 ORTHO05D007185 3.0e-31 138.3 84 85.7
Haze_19026 Corylus avellana HOM05D000068 ORTHO05D007185 1.1e-30 136.3 83 85.5
Haze_19042 Corylus avellana HOM05D000068 ORTHO05D007185 1.1e-30 136.3 83 85.5
CANSAT21G1866 Cannabis sativa HOM05D000068 ORTHO05D007185 1.5e-30 136.0 84 81.0
CiPaw.15G154100 Carya illinoinensis HOM05D000068 ORTHO05D007185 1.9e-30 135.6 83 85.5
Ciclev10009186m.g Citrus clementina HOM05D000068 ORTHO05D007185 2.5e-30 135.2 83 84.3
Cc04_g05450 Coffea canephora HOM05D000068 ORTHO05D007185 3.3e-30 134.8 84 81.0
Sed0009871 Sechium edule HOM05D000068 ORTHO05D007185 3.3e-30 134.8 84 82.1
Solyc06g068600.3 Solanum lycopersicum HOM05D000068 ORTHO05D007185 3.3e-30 134.8 84 81.0
Sopen06g025860 Solanum pennellii HOM05D000068 ORTHO05D007185 3.3e-30 134.8 84 81.0
CiPaw.16G102700 Carya illinoinensis HOM05D000068 ORTHO05D007185 5.6e-30 134.0 84 82.1
Duzib106G1412 Durio zibethinus HOM05D000068 ORTHO05D007185 7.3e-30 133.7 84 79.8
Atru.chr7.988 Acer truncatum HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 81.0
CAN.G1503.16 Capsicum annuum HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 78.6
Gorai.011G220300 Gossypium raimondii HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 77.4
Peaxi162Scf00207g00336 Petunia axillaris HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 79.8
PGR142G3415 Punica granatum HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 79.8
PGSC0003DMG400028925 Solanum tuberosum HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 79.8
THA.LOC104825572 Tarenaya hassleriana HOM05D000068 ORTHO05D007185 1.6e-29 132.5 84 82.1
DCAR_021383 Daucus carota HOM05D000068 ORTHO05D007185 2.1e-29 132.1 84 83.3
Gohir.A10G189200 Gossypium hirsutum HOM05D000068 ORTHO05D007185 2.1e-29 132.1 84 77.4
Manes.10G090300 Manihot esculenta HOM05D000068 ORTHO05D007185 2.8e-29 131.7 84 79.8
Thecc.10G142700 Theobroma cacao HOM05D000068 ORTHO05D007185 2.8e-29 131.7 84 78.6
RcHm_v2.0_Chr4g0398581 Rosa chinensis HOM05D000068 ORTHO05D007185 3.6e-29 131.3 84 82.1
SalBow1G4973 Salvia bowleyana HOM05D000068 ORTHO05D007185 3.6e-29 131.3 85 78.8
GSVIVG01029255001 Vitis vinifera HOM05D000068 ORTHO05D007185 3.6e-29 131.3 84 79.8
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.2e-29 130.6 84 81.0
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.2e-29 130.6 84 81.0
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.2e-29 130.6 84 81.0
VMungo0251G3483 Vigna mungo HOM05D000068 ORTHO05D007185 6.2e-29 130.6 84 81.0
Actinidia02558 Actinidia chinensis HOM05D000068 ORTHO05D007185 8.1e-29 130.2 84 79.8
CSS0049357 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D007185 8.1e-29 130.2 84 79.8
MELO3C017401.2 Cucumis melo HOM05D000068 ORTHO05D007185 8.1e-29 130.2 84 81.0
FvH4_4g06671 Fragaria vesca HOM05D000068 ORTHO05D007185 8.1e-29 130.2 84 79.8
vmacro13135 Vaccinium macrocarpon HOM05D000068 ORTHO05D007185 1.1e-28 129.8 84 78.6
CAN.G1008.21 Capsicum annuum HOM05D000068 ORTHO05D007185 1.4e-28 129.4 84 77.4
MD13G1237100 Malus domestica HOM05D000068 ORTHO05D007185 1.4e-28 129.4 84 81.0
Solyc03g117810.4 Solanum lycopersicum HOM05D000068 ORTHO05D007185 1.4e-28 129.4 84 77.4
Sopen03g036720 Solanum pennellii HOM05D000068 ORTHO05D007185 1.4e-28 129.4 84 77.4
CsaV3_1G032140 Cucumis sativus L. HOM05D000068 ORTHO05D007185 1.8e-28 129.0 84 79.8
Lalb_Chr05g0221611 Lupinus albus HOM05D000068 ORTHO05D007185 1.8e-28 129.0 84 79.8
Eucgr.J02855 Eucalyptus grandis HOM05D000068 ORTHO05D007185 2.3e-28 128.6 84 78.6
Peaxi162Scf00314g00093 Petunia axillaris HOM05D000068 ORTHO05D007185 2.3e-28 128.6 84 75.0
Potri.018G132000 Populus trichocarpa HOM05D000068 ORTHO05D007185 2.3e-28 128.6 84 77.4
TWI60G1694 Tripterygium wilfordii HOM05D000068 ORTHO05D007185 2.3e-28 128.6 83 78.3
Actinidia18270 Actinidia chinensis HOM05D000068 ORTHO05D007185 3.1e-28 128.3 84 79.8
Cpa.g.sc2.166 Carica papaya HOM05D000068 ORTHO05D007185 3.1e-28 128.3 84 79.8
Dinv21442 Davidia involucrata HOM05D000068 ORTHO05D007185 3.1e-28 128.3 83 79.5
Lj5A83T36 Lonicera japonica HOM05D000068 ORTHO05D007185 3.1e-28 128.3 84 78.6
Nitab4.5_0004553g0040 Nicotiana tabacum HOM05D000068 ORTHO05D007185 3.1e-28 128.3 84 75.0
Prupe.1G069500 Prunus persica HOM05D000068 ORTHO05D007185 3.1e-28 128.3 84 81.0
PGSC0003DMG400014219 Solanum tuberosum HOM05D000068 ORTHO05D007185 4.0e-28 127.9 84 76.2
Aqoxy7G02995 Aquilegia oxysepala HOM05D000068 ORTHO05D007185 5.2e-28 127.5 84 77.4
Nitab4.5_0004194g0040 Nicotiana tabacum HOM05D000068 ORTHO05D007185 5.2e-28 127.5 84 73.8
Phvul.002G330700 Phaseolus vulgaris HOM05D000068 ORTHO05D007185 5.2e-28 127.5 84 78.6
Sabra18G0111700 Salix brachista HOM05D000068 ORTHO05D007185 5.2e-28 127.5 84 75.0
SGA_v2.0_scaffold5G02829 Striga asiatica HOM05D000068 ORTHO05D007185 5.2e-28 127.5 84 78.6
Aa31sc40G40 Aethionema arabicum HOM05D000068 ORTHO05D007185 6.8e-28 127.1 84 77.4
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.8e-28 127.1 84 78.6
CSS0013512 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D007185 8.9e-28 126.7 84 78.6
Rhsim01G0002800 Rhododendron simsii HOM05D000068 ORTHO05D007185 8.9e-28 126.7 84 77.4
Lj4g0027391 Lotus japonicus HOM05D000068 ORTHO05D007185 1.5e-27 125.9 84 78.6
MD16G1242500 Malus domestica HOM05D000068 ORTHO05D007185 1.5e-27 125.9 84 78.6
Ah.04g164430 Amaranthus hybridus HOM05D002172 ORTHO05D007185 2.0e-27 125.6 84 75.0
Hma1.2p1_0235F.1_g098970 Hydrangea macrophylla HOM05D000068 ORTHO05D007185 2.0e-27 125.6 84 75.0
BcaC08g46223 Brassica carinata HOM05D000068 ORTHO05D007185 3.4e-27 124.8 84 76.2
A07p34490 Brassica napus HOM05D000068 ORTHO05D007185 3.4e-27 124.8 84 76.2
C06p42020 Brassica napus HOM05D000068 ORTHO05D007185 3.4e-27 124.8 84 76.2
BolC6t39225H Brassica oleracea HOM05D000068 ORTHO05D007185 3.4e-27 124.8 84 76.2
ECA246G0160 Erigeron canadensis HOM05D000068 ORTHO05D007185 3.4e-27 124.8 84 78.6
ATR0580G070 Amborella trichopoda HOM05D000068 ORTHO05D007185 4.4e-27 124.4 84 72.6
Lsat_1_v5_gn_5_9120 Lactuca sativa HOM05D000068 ORTHO05D007185 5.8e-27 124.0 84 75.0
Manes.07G049400 Manihot esculenta HOM05D000068 ORTHO05D007185 5.8e-27 124.0 84 73.8
BcaB03g15145 Brassica carinata HOM05D000068 ORTHO05D007185 7.5e-27 123.6 84 73.8
MSTRG.22834 Avicennia marina HOM05D000068 ORTHO05D007185 9.9e-27 123.2 83 77.1
MSTRG.9387 Avicennia marina HOM05D000068 ORTHO05D007185 9.9e-27 123.2 84 75.0
AUR62019519 Chenopodium quinoa HOM05D000068 ORTHO05D007185 1.3e-26 122.9 84 73.8
Glyma.08G055000 Glycine max HOM05D000068 ORTHO05D007185 1.3e-26 122.9 84 78.6
Hma1.2p1_1561F.1_g290730 Hydrangea macrophylla HOM05D000068 ORTHO05D007185 1.3e-26 122.9 84 75.0
Sp5g22980 Schrenkiella parvula HOM05D000068 ORTHO05D007185 1.3e-26 122.9 84 75.0
Hund07508 Selenicereus undatus HOM05D000068 ORTHO05D007185 1.3e-26 122.9 83 74.7
Dinv41209 Davidia involucrata HOM05D000068 ORTHO05D007185 1.7e-26 122.5 77 79.2
TPR.G1457 Trifolium pratense HOM05D000068 ORTHO05D007185 1.7e-26 122.5 84 75.0
Thhalv10019008m.g Eutrema salsugineum HOM05D000068 ORTHO05D007185 2.2e-26 122.1 84 75.0
Sc03g0010300 Simmondsia chinensis HOM05D000068 ORTHO05D007185 2.2e-26 122.1 84 72.6
Actinidia25493 Actinidia chinensis HOM05D000068 ORTHO05D007185 2.9e-26 121.7 84 77.4
EL10Ac4g08298 Beta vulgaris HOM05D000068 ORTHO05D007185 2.9e-26 121.7 84 72.6
Carub.0002s1443 Capsella rubella HOM05D000068 ORTHO05D007185 2.9e-26 121.7 84 72.6
AL2G26980 Arabidopsis lyrata HOM05D000068 ORTHO05D007185 3.7e-26 121.3 84 73.8
AT1G67940 Arabidopsis thaliana HOM05D000068 ORTHO05D007185 4.9e-26 120.9 84 73.8
Lsat_1_v5_gn_6_103140 Lactuca sativa HOM05D000068 ORTHO05D007185 4.9e-26 120.9 84 78.6
AUR62036120 Chenopodium quinoa HOM05D000068 ORTHO05D007185 6.4e-26 120.6 84 73.8
COL.COLO4_06640 Corchorus olitorius HOM05D000068 ORTHO05D007185 6.4e-26 120.6 81 74.1
CARHR060600 Cardamine hirsuta HOM05D000068 ORTHO05D007185 8.3e-26 120.2 84 72.6
Oeu027817.1 Olea europaea HOM05D000068 ORTHO05D007185 8.3e-26 120.2 84 73.8
Medtr8g107410 Medicago truncatula HOM05D000068 ORTHO05D007185 1.4e-25 119.4 84 72.6
TAR365G0285 Trochodendron aralioides HOM05D000068 ORTHO05D007185 1.4e-25 119.4 84 70.2
TAR566G0001 Trochodendron aralioides HOM05D000068 ORTHO05D007185 1.4e-25 119.4 84 70.2
HanXRQChr05g0157521 Helianthus annuus HOM05D000068 ORTHO05D007185 1.9e-25 119.0 84 77.4
HPP92_017137 Vanilla planifolia HOM05D000068 ORTHO05D007185 1.9e-25 119.0 83 72.3
Ah.06g185010 Amaranthus hybridus HOM05D000068 ORTHO05D007185 2.4e-25 118.6 79 73.4
CDE05G0394 Ceratophyllum demersum HOM05D000068 ORTHO05D007185 2.4e-25 118.6 84 70.2
Os06g0695800 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D007185 3.2e-25 118.2 83 71.1
arahy.Tifrunner.gnm1.ann1.WB8Z1Y Arachis hypogaea HOM05D000086 ORTHO05D007185 4.1e-25 117.9 84 72.6
Ca_17198_v3 Cicer arietinum L. HOM05D000068 ORTHO05D007185 5.4e-25 117.5 84 72.6
unitig_61.g26280 Utricularia gibba HOM05D000068 ORTHO05D007185 5.4e-25 117.5 84 65.5
CDE05G2904 Ceratophyllum demersum HOM05D000068 ORTHO05D007185 7.1e-25 117.1 84 66.7
arahy.Tifrunner.gnm1.ann1.466F5F Arachis hypogaea HOM05D000086 ORTHO05D007185 2.1e-24 115.5 84 70.2
Migut.I00639 Erythranthe guttata HOM05D000068 ORTHO05D007185 4.6e-24 114.4 84 71.4
unitig_22.g6279 Utricularia gibba HOM05D000068 ORTHO05D007185 7.8e-24 113.6 79 73.4
PSO170G4431 Papaver somniferum HOM05D000068 ORTHO05D007185 2.3e-23 112.1 83 66.3
PSO063G0486 Papaver somniferum HOM05D000068 ORTHO05D007185 3.0e-23 111.7 83 65.1
MBI14_g19450_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D007185 1.5e-22 109.4 84 65.5
MBI16_g44477_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D007185 3.3e-22 108.2 85 67.1
CSS0044182 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D007185 1.5e-19 99.4 65 78.5
SMO137G0258 Selaginella moellendorffii HOM05D000068 ORTHO05D007185 1.7e-18 95.9 83 56.6
Mapoly0010s0182 Marchantia polymorpha HOM05D000068 ORTHO05D007185 5.4e-17 90.9 84 45.2
Pp3c4_26240 Physcomitrium patens HOM05D000068 ORTHO05D007185 4.6e-16 87.8 81 55.6
AagrBONN_evm.TU.Sc2ySwM_368.1232 Anthoceros agrestis HOM05D000068 ORTHO05D007185 1.0e-15 86.7 83 51.8
DCAR_017704 Daucus carota HOM05D000068 ORTHO05D174889 7.3e-14 80.5 50 82.0
SMO143G0232 Selaginella moellendorffii HOM05D000068 ORTHO05D007185 2.2e-10 68.9 84 40.5
CBR_g74693 Chara braunii HOM05D000068 ORTHO05D007185 2.4e-09 65.5 70 44.3
Pp3s30_750 Physcomitrium patens HOM05D000068 ORTHO05D034621 2.1e-08 62.4 68 42.6
AagrBONN_evm.TU.Sc2ySwM_368.1296 Anthoceros agrestis HOM05D000068 ORTHO05D007185 1.5e-06 56.2 60 43.3
ClCG06G013930 Citrullus lanatus HOM05D000157 ORTHO05D007185 1.9e-06 55.8 38 78.9


User provided reference genes

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