Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 2.0e-202 709.1 430 100.0
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 9.1e-155 550.8 425 68.0
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 2.9e-140 502.7 411 60.6
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 1.1e-136 490.7 423 74.7
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 2.5e-136 489.6 411 59.6
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 4.3e-136 488.8 354 70.3
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.2e-135 487.3 411 59.4
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 2.6e-133 479.6 386 61.1
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 6.4e-132 474.9 387 67.4
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 2.4e-131 473.0 409 77.5
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 1.1e-128 464.2 427 76.3
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 5.6e-128 461.8 391 60.6
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 6.8e-126 454.9 425 62.4
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 3.4e-125 452.6 424 55.2
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 5.8e-125 451.8 394 58.4
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 5.8e-125 451.8 424 55.2
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.3e-124 450.7 387 58.1
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 3.7e-124 449.1 386 57.8
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 6.4e-124 448.4 386 72.0
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 1.1e-123 447.6 411 57.7
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 1.1e-123 447.6 387 63.0
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 1.6e-122 443.7 386 57.3
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 4.6e-122 442.2 424 70.0
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 1.7e-121 440.3 386 56.7
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 2.5e-120 436.4 386 56.7
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 1.6e-119 433.7 421 53.7
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 4.0e-118 429.1 387 56.3
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 8.9e-118 427.9 385 57.1
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 2.4e-115 419.9 415 53.3
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 1.2e-114 417.5 413 53.3
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 6.0e-114 415.2 415 53.3
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 6.6e-113 411.8 404 53.0
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 5.6e-112 408.7 393 54.2
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 2.8e-111 406.4 392 55.1
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 6.2e-111 405.2 234 82.1
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 1.8e-110 403.7 367 74.9
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 5.3e-110 402.1 383 53.5
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 9.0e-110 401.4 354 57.9
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 3.4e-109 399.4 354 57.3
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 6.4e-108 395.2 382 52.6
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 4.2e-107 392.5 327 60.6
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 4.2e-107 392.5 423 57.0
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 9.3e-107 391.3 397 51.1
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 1.2e-106 391.0 367 54.8
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 1.6e-106 390.6 354 56.8
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 2.7e-106 389.8 368 53.3
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 1.0e-105 387.9 397 50.4
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 1.0e-105 387.9 404 50.0
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 1.7e-105 387.1 393 53.7
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 3.9e-105 386.0 431 65.2
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 1.9e-104 383.6 362 53.6
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 5.6e-104 382.1 386 50.5
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 9.6e-104 381.3 395 49.6
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 1.6e-103 380.6 398 49.2
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 2.8e-103 379.8 355 54.9
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 3.6e-103 379.4 466 47.6
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 6.2e-103 378.6 343 57.4
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 8.1e-103 378.3 234 76.9
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.4e-102 377.5 398 49.7
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 3.1e-102 376.3 390 49.7
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 4.5e-101 372.5 412 48.3
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 4.5e-101 372.5 234 73.9
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 7.6e-101 371.7 386 50.0
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 7.6e-101 371.7 374 51.9
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 2.2e-100 370.2 386 49.7
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 3.8e-100 369.4 386 49.7
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 8.4e-100 368.2 380 50.0
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 8.4e-100 368.2 344 54.1
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 1.4e-99 367.5 351 65.8
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 2.4e-99 366.7 392 48.5
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 4.2e-99 365.9 234 73.5
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 7.1e-99 365.2 235 74.5
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 3.5e-98 362.8 235 73.6
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 7.9e-98 361.7 334 55.4
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 1.8e-97 360.5 235 73.2
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 1.8e-97 360.5 235 72.8
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 3.9e-97 359.4 378 49.5
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 1.5e-96 357.5 370 49.7
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 1.5e-96 357.5 378 51.1
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.5e-96 357.5 334 54.8
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 9.6e-96 354.8 354 70.6
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 2.8e-95 353.2 234 73.1
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 3.7e-95 352.8 329 54.4
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 1.5e-93 347.4 391 46.5
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 5.8e-93 345.5 351 66.1
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 6.5e-92 342.0 354 58.5
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 8.4e-92 341.7 232 69.8
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 5.7e-88 328.9 347 49.3
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 1.6e-87 327.4 214 71.0
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 2.8e-87 326.6 386 44.8
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 8.2e-87 325.1 327 53.2
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 1.4e-86 324.3 390 46.7
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 3.4e-85 319.7 234 68.8
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 1.8e-78 297.4 236 61.9
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 1.2e-77 294.7 235 60.0
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 6.5e-76 288.9 179 78.2
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 1.1e-75 288.1 235 60.4
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 2.0e-72 277.3 374 44.1
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 2.5e-72 276.9 199 66.8
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 9.1e-70 268.5 235 55.3
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 5.0e-68 262.7 234 56.4
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 4.2e-59 233.0 347 41.5
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 8.8e-49 198.7 237 68.4
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 2.2e-47 194.1 153 62.1
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 1.4e-41 174.9 166 54.2
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 8.8e-41 172.2 199 48.2
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 4.5e-37 159.8 167 50.3
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 6.1e-34 149.4 281 34.9
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.6e-29 134.8 205 38.0
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 9.5e-19 99.0 127 42.5
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 9.8e-16 89.0 230 31.3
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 2.2e-15 87.8 178 33.1
Sabra06G0059400 Salix brachista HOM05D007036 ORTHO05D008885 5.4e-14 83.2 78 47.4
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 7.8e-13 79.3 198 29.8
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 3.0e-12 77.4 194 30.9
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 4.3e-11 73.6 185 31.4
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 7.3e-11 72.8 207 30.9
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 9.5e-11 72.4 204 31.9
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 1.6e-10 71.6 179 30.7
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.4e-09 68.6 185 30.8
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 1.8e-09 68.2 186 30.1
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 3.1e-09 67.4 47 59.6
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 3.1e-09 67.4 187 29.4
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 1.2e-08 65.5 170 30.0
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 3.4e-08 63.9 184 29.9
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 4.4e-08 63.5 184 29.9
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 4.4e-08 63.5 156 30.8
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 1.4e-06 58.5 199 28.6
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 1.9e-06 58.2 189 29.1
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 4.1e-06 57.0 156 30.1


User provided reference genes

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