Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p005502 Quercus lobata HOM05D021424 ORTHO05D008569 5.7e-104 380.9 194 100.0
QL01p033779 Quercus lobata HOM05D000012 ORTHO05D008569 9.8e-48 194.1 190 57.9
QL01p033795 Quercus lobata HOM05D000012 ORTHO05D008569 6.4e-47 191.4 191 56.0
QL11p005396 Quercus lobata HOM05D000372 ORTHO05D008569 6.2e-42 174.9 192 53.1
QL01p033709 Quercus lobata HOM05D021424 ORTHO05D008569 2.1e-34 149.8 115 65.2
QL11p005540 Quercus lobata HOM05D021424 ORTHO05D008569 8.9e-33 144.4 116 64.7
Dinv44145 Davidia involucrata HOM05D000012 ORTHO05D008569 4.4e-24 115.5 191 38.2
Dinv01019 Davidia involucrata HOM05D000012 ORTHO05D008569 2.2e-23 113.2 166 39.8
QL11p005594 Quercus lobata HOM05D021424 ORTHO05D008569 8.4e-23 111.3 88 60.2
QL93p1998_0013 Quercus lobata HOM05D021424 ORTHO05D008569 8.4e-23 111.3 88 60.2
TAR383G0362 Trochodendron aralioides HOM05D000189 ORTHO05D008569 8.4e-23 111.3 188 37.8
TAR623G1521 Trochodendron aralioides HOM05D000012 ORTHO05D008569 1.4e-22 110.5 188 38.8
Thecc.05G019700 Theobroma cacao HOM05D000012 ORTHO05D008569 1.3e-20 104.0 188 36.7
QL12p032107 Quercus lobata HOM05D000012 ORTHO05D008569 1.7e-20 103.6 191 37.7
CSS0026673 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 3.0e-20 102.8 188 32.4
TAR376G0707 Trochodendron aralioides HOM05D000012 ORTHO05D008569 1.5e-19 100.5 155 38.1
QL12p032157 Quercus lobata HOM05D000012 ORTHO05D008569 4.3e-19 99.0 190 35.3
GSVIVG01033988001 Vitis vinifera HOM05D000012 ORTHO05D008569 2.4e-17 93.2 189 33.3
Duzib128G1657 Durio zibethinus HOM05D000012 ORTHO05D008569 3.1e-17 92.8 188 35.6
CSS0017801 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 4.4e-16 89.0 194 29.9
QL12p025566 Quercus lobata HOM05D022165 ORTHO05D008569 9.9e-16 87.8 199 36.7
Nitab4.5_0002651g0050 Nicotiana tabacum HOM05D000012 ORTHO05D008569 1.9e-14 83.6 159 35.8
QL04p005008 Quercus lobata HOM05D000012 ORTHO05D008569 3.5e-13 79.3 147 38.8
Oeu012328.1 Olea europaea HOM05D000012 ORTHO05D008569 1.9e-11 73.6 190 30.5
CAN.G186.75 Capsicum annuum HOM05D000012 ORTHO05D008569 4.8e-10 68.9 176 31.8
Potri.017G145500 Populus trichocarpa HOM05D000012 ORTHO05D008569 8.1e-10 68.2 200 28.5
MD13G1165300 Malus domestica HOM05D000012 ORTHO05D008569 1.4e-09 67.4 115 36.5
Thecc.08G158000 Theobroma cacao HOM05D000012 ORTHO05D016964 5.3e-09 65.5 110 35.5
Prupe.1G124600 Prunus persica HOM05D000012 ORTHO05D008569 1.2e-08 64.3 120 34.2
Manes.07G037900 Manihot esculenta HOM05D000012 ORTHO05D008569 2.6e-08 63.2 164 29.3
Oeu012327.1 Olea europaea HOM05D000012 ORTHO05D008569 3.4e-08 62.8 192 28.1
RcHm_v2.0_Chr3g0477161 Rosa chinensis HOM05D000012 ORTHO05D008569 4.5e-08 62.4 112 31.2
Oeu012329.1 Olea europaea HOM05D000012 ORTHO05D008569 7.6e-08 61.6 168 29.8
AUR62022796 Chenopodium quinoa HOM05D000012 ORTHO05D002345 2.2e-07 60.1 148 27.7
Oeu010145.1 Olea europaea HOM05D000012 ORTHO05D008569 2.2e-07 60.1 189 29.6
Ciclev10019504m.g Citrus clementina HOM05D000012 ORTHO05D008569 2.9e-07 59.7 167 30.5
AUR62012160 Chenopodium quinoa HOM05D000012 ORTHO05D002345 8.4e-07 58.2 161 26.1
AUR62012161 Chenopodium quinoa HOM05D000012 ORTHO05D002345 8.4e-07 58.2 161 26.1
Ca_19690_v3 Cicer arietinum L. HOM05D000012 ORTHO05D000540 8.4e-07 58.2 145 27.6
Ca_29763_v3 Cicer arietinum L. HOM05D000012 ORTHO05D000540 8.4e-07 58.2 145 27.6
Medtr4g033330 Medicago truncatula HOM05D000012 ORTHO05D000540 1.9e-06 57.0 172 26.7
Medtr4g033385 Medicago truncatula HOM05D000012 ORTHO05D000540 1.9e-06 57.0 148 27.7
Medtr4g033395 Medicago truncatula HOM05D000012 ORTHO05D000540 1.9e-06 57.0 148 27.7
HanXRQChr02g0036671 Helianthus annuus HOM05D000012 ORTHO05D000540 2.4e-06 56.6 100 30.0
QL11p005339 Quercus lobata HOM05D021424 ORTHO05D008569 4.2e-06 55.8 43 58.1
Ah.16g102740 Amaranthus hybridus HOM05D000012 ORTHO05D002345 5.4e-06 55.5 159 28.9
Ca_03795_v3 Cicer arietinum L. HOM05D000012 ORTHO05D000540 5.4e-06 55.5 145 26.9
TWI38G0142 Tripterygium wilfordii HOM05D000012 ORTHO05D000540 7.1e-06 55.1 149 28.2
CSS0025443 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D003972 9.3e-06 54.7 147 29.3
Medtr0294s0020 Medicago truncatula HOM05D000012 ORTHO05D000540 9.3e-06 54.7 139 27.3


User provided reference genes

Program Settings