Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p005479 Quercus lobata HOM05D018408 ORTHO05D015098 5.8e-71 270.8 137 100.0
QL01p033790 Quercus lobata HOM05D018408 ORTHO05D015098 1.8e-27 126.3 105 63.8
Dinv01019 Davidia involucrata HOM05D000012 ORTHO05D008569 4.0e-19 98.6 101 50.5
Thecc.05G019700 Theobroma cacao HOM05D000012 ORTHO05D008569 4.8e-17 91.7 99 42.4
Gohir.D05G247400 Gossypium hirsutum HOM05D000012 ORTHO05D008569 1.1e-16 90.5 93 46.2
QL01p033773 Quercus lobata HOM05D018408 ORTHO05D015098 2.4e-16 89.4 64 73.4
QL11p005387 Quercus lobata HOM05D018408 ORTHO05D015098 1.2e-15 87.0 103 51.5
QL04p005001 Quercus lobata HOM05D018408 ORTHO05D015098 1.3e-14 83.6 77 53.2
Manes.07G037900 Manihot esculenta HOM05D000012 ORTHO05D008569 8.5e-14 80.9 100 39.0
GSVIVG01033988001 Vitis vinifera HOM05D000012 ORTHO05D008569 4.2e-13 78.6 99 39.4
QL12p032107 Quercus lobata HOM05D000012 ORTHO05D008569 7.2e-13 77.8 134 38.8
Duzib128G1657 Durio zibethinus HOM05D000012 ORTHO05D008569 9.4e-13 77.4 102 37.3
TAR376G0707 Trochodendron aralioides HOM05D000012 ORTHO05D008569 1.2e-12 77.0 93 37.6
CSS0017801 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 1.6e-12 76.6 93 35.5
Dinv44145 Davidia involucrata HOM05D000012 ORTHO05D008569 2.7e-12 75.9 73 45.2
FvH4_4g18590 Fragaria vesca HOM05D000012 ORTHO05D008569 8.0e-12 74.3 93 36.6
Prupe.1G124600 Prunus persica HOM05D000012 ORTHO05D008569 3.0e-11 72.4 104 36.5
Gohir.A05G245900 Gossypium hirsutum HOM05D000012 ORTHO05D008569 5.2e-11 71.6 93 39.8
Prupe.1G125000 Prunus persica HOM05D000012 ORTHO05D008569 1.5e-10 70.1 85 40.0
Oeu012327.1 Olea europaea HOM05D000012 ORTHO05D008569 2.6e-10 69.3 88 39.8
Oeu012328.1 Olea europaea HOM05D000012 ORTHO05D008569 2.6e-10 69.3 100 38.0
Oeu012333.1 Olea europaea HOM05D000012 ORTHO05D008569 7.5e-10 67.8 87 39.1
Prupe.1G124900 Prunus persica HOM05D000012 ORTHO05D008569 9.8e-10 67.4 90 38.9
Prupe.1G124400 Prunus persica HOM05D000012 ORTHO05D008569 1.7e-09 66.6 90 40.0
Rhsim07G0238700 Rhododendron simsii HOM05D018408 ORTHO05D015098 1.7e-09 66.6 122 33.6
Actinidia39382 Actinidia chinensis HOM05D000012 ORTHO05D008569 2.2e-09 66.2 99 33.3
QL12p032157 Quercus lobata HOM05D000012 ORTHO05D008569 2.8e-09 65.9 106 39.6
SalBow6G3364 Salvia bowleyana HOM05D000012 ORTHO05D008569 8.3e-09 64.3 84 40.5
Potri.017G145500 Populus trichocarpa HOM05D000012 ORTHO05D008569 2.4e-08 62.8 98 36.7
TAR623G1521 Trochodendron aralioides HOM05D000012 ORTHO05D008569 2.4e-08 62.8 69 40.6
Rhsim07G0238800 Rhododendron simsii HOM05D000012 ORTHO05D008569 1.6e-07 60.1 78 33.3
Dinv40964 Davidia involucrata HOM05D000896 ORTHO05D000594 2.7e-07 59.3 72 40.3
Ciclev10006436m.g Citrus clementina HOM05D000012 ORTHO05D008569 7.7e-07 57.8 95 34.7
Gorai.009G258200 Gossypium raimondii HOM05D000012 ORTHO05D008569 1.0e-06 57.4 93 35.5
Rhsim07G0238400 Rhododendron simsii HOM05D000012 ORTHO05D008569 1.0e-06 57.4 77 37.7
Thecc.09G255500 Theobroma cacao HOM05D017018 ORTHO05D016964 1.3e-06 57.0 95 36.8
HanXRQChr15g0463621 Helianthus annuus HOM05D030595 ORTHO05D015098 2.9e-06 55.8 89 37.1
Aqoxy6G00056 Aquilegia oxysepala HOM05D000012 ORTHO05D000540 8.6e-06 54.3 99 37.4
QL12p032080 Quercus lobata HOM05D018408 ORTHO05D015098 8.6e-06 54.3 58 50.0


User provided reference genes

Program Settings