Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p005339 Quercus lobata HOM05D021424 ORTHO05D008569 9.5e-150 533.5 271 100.0
QL01p033779 Quercus lobata HOM05D000012 ORTHO05D008569 1.2e-83 313.9 538 43.3
QL01p033709 Quercus lobata HOM05D021424 ORTHO05D008569 1.7e-69 266.9 316 55.1
QL11p005516 Quercus lobata HOM05D000012 ORTHO05D008569 5.5e-57 225.3 270 53.7
QL11p005396 Quercus lobata HOM05D000372 ORTHO05D008569 1.6e-56 223.8 410 42.4
QL01p033704 Quercus lobata HOM05D000012 ORTHO05D008569 1.1e-41 174.5 179 60.3
QL01p033795 Quercus lobata HOM05D000012 ORTHO05D008569 6.4e-29 132.1 324 35.2
QL12p032203 Quercus lobata HOM05D000012 ORTHO05D008569 2.1e-16 90.5 81 56.8
QL12p032123 Quercus lobata HOM05D000012 ORTHO05D008569 6.2e-16 89.0 81 55.6
QL11p005594 Quercus lobata HOM05D021424 ORTHO05D008569 4.4e-14 82.8 43 90.7
QL93p1998_0013 Quercus lobata HOM05D021424 ORTHO05D008569 4.4e-14 82.8 43 90.7
QL12p032157 Quercus lobata HOM05D000012 ORTHO05D008569 3.8e-13 79.7 75 56.0
TAR623G1521 Trochodendron aralioides HOM05D000012 ORTHO05D008569 4.9e-13 79.3 76 51.3
QL11p005540 Quercus lobata HOM05D021424 ORTHO05D008569 6.4e-13 79.0 43 93.0
Dinv01019 Davidia involucrata HOM05D000012 ORTHO05D008569 1.1e-12 78.2 104 44.2
GSVIVG01033988001 Vitis vinifera HOM05D000012 ORTHO05D008569 3.2e-12 76.6 79 49.4
Dinv44145 Davidia involucrata HOM05D000012 ORTHO05D008569 5.4e-12 75.9 76 50.0
MBI14_g09429_MAGBIO Magnolia biondii HOM05D000012 ORTHO05D018416 5.4e-12 75.9 104 41.3
TAR376G0707 Trochodendron aralioides HOM05D000012 ORTHO05D008569 5.4e-12 75.9 114 42.1
QL12p032107 Quercus lobata HOM05D000012 ORTHO05D008569 1.6e-11 74.3 76 56.6
CSS0017801 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 3.5e-11 73.2 87 46.0
CAN.G186.75 Capsicum annuum HOM05D000012 ORTHO05D008569 4.6e-11 72.8 121 37.2
COL.COLO4_13795 Corchorus olitorius HOM05D000012 ORTHO05D008569 7.8e-11 72.0 76 50.0
Manes.07G037900 Manihot esculenta HOM05D000012 ORTHO05D008569 5.1e-10 69.3 87 47.1
Manes.07G036633 Manihot esculenta HOM05D000012 ORTHO05D008569 8.7e-10 68.6 105 36.2
Manes.07G035900 Manihot esculenta HOM05D000012 ORTHO05D008569 2.5e-09 67.0 76 50.0
Thecc.08G158000 Theobroma cacao HOM05D000012 ORTHO05D016964 3.3e-09 66.6 71 47.9
Aqoxy5G03397 Aquilegia oxysepala HOM05D000012 ORTHO05D002345 7.3e-09 65.5 86 40.7
Dinv08051 Davidia involucrata HOM05D000012 ORTHO05D008569 9.6e-09 65.1 128 35.9
Nitab4.5_0002651g0050 Nicotiana tabacum HOM05D000012 ORTHO05D008569 1.6e-08 64.3 117 35.0
Atru.chr12.1035 Acer truncatum HOM05D000240 ORTHO05D008569 2.1e-08 63.9 87 41.4
RcHm_v2.0_Chr4g0405251 Rosa chinensis HOM05D000012 ORTHO05D008569 2.1e-08 63.9 117 38.5
MD13G1165300 Malus domestica HOM05D000012 ORTHO05D008569 2.8e-08 63.5 65 50.8
Thecc.05G019700 Theobroma cacao HOM05D000012 ORTHO05D008569 2.8e-08 63.5 79 41.8
Potri.017G145500 Populus trichocarpa HOM05D000012 ORTHO05D008569 3.6e-08 63.2 74 43.2
Oeu010145.1 Olea europaea HOM05D000012 ORTHO05D008569 6.2e-08 62.4 69 46.4
Potri.017G145532 Populus trichocarpa HOM05D000012 ORTHO05D008569 6.2e-08 62.4 74 43.2
Nn8g40963 Nelumbo nucifera HOM05D000012 ORTHO05D003972 1.4e-07 61.2 75 48.0
Oeu012330.2 Olea europaea HOM05D000012 ORTHO05D008569 1.4e-07 61.2 69 44.9
Oeu012327.1 Olea europaea HOM05D000012 ORTHO05D008569 1.8e-07 60.8 69 40.6
TWI63G1407 Tripterygium wilfordii HOM05D000012 ORTHO05D002345 1.8e-07 60.8 80 40.0
COL.COLO4_27857 Corchorus olitorius HOM05D000012 ORTHO05D003972 2.4e-07 60.5 74 45.9
Gohir.D05G247400 Gossypium hirsutum HOM05D000012 ORTHO05D008569 2.4e-07 60.5 84 44.0
Gorai.009G258200 Gossypium raimondii HOM05D000012 ORTHO05D008569 2.4e-07 60.5 84 44.0
MBI05_g14235_MAGBIO Magnolia biondii HOM05D000012 ORTHO05D244188 2.4e-07 60.5 130 33.1
ECA247G1715 Erigeron canadensis HOM05D000275 ORTHO05D015098 3.1e-07 60.1 75 44.0
RcHm_v2.0_Chr3g0464761 Rosa chinensis HOM05D000012 ORTHO05D002345 3.1e-07 60.1 122 32.8
CAN.G186.38 Capsicum annuum HOM05D000012 ORTHO05D008569 4.0e-07 59.7 83 38.6
Atru.chr3.97 Acer truncatum HOM05D000012 ORTHO05D008569 5.3e-07 59.3 80 40.0
PSO782G3566 Papaver somniferum HOM05D000012 ORTHO05D003972 5.3e-07 59.3 114 35.1
QL07p035993 Quercus lobata HOM05D000012 ORTHO05D003972 5.3e-07 59.3 105 37.1
Atru.chr4.1834_Atru.chr4.1836 Acer truncatum HOM05D000012 ORTHO05D008569 6.9e-07 58.9 76 42.1
Migut.D02557 Erythranthe guttata HOM05D000012 ORTHO05D008569 6.9e-07 58.9 45 55.6
Oeu012333.1 Olea europaea HOM05D000012 ORTHO05D008569 6.9e-07 58.9 47 53.2
Prupe.1G125000 Prunus persica HOM05D000012 ORTHO05D008569 6.9e-07 58.9 60 50.0
QL04p005008 Quercus lobata HOM05D000012 ORTHO05D008569 6.9e-07 58.9 60 50.0
FvH4_4g29000 Fragaria vesca HOM05D000012 ORTHO05D008569 9.0e-07 58.5 62 48.4
PSO063G2257 Papaver somniferum HOM05D000012 ORTHO05D003972 9.0e-07 58.5 114 33.3
Prupe.1G124600 Prunus persica HOM05D000012 ORTHO05D008569 9.0e-07 58.5 81 44.4
SalBow6G0877 Salvia bowleyana HOM05D000012 ORTHO05D008569 9.0e-07 58.5 49 49.0
SalBow6G3364 Salvia bowleyana HOM05D000012 ORTHO05D008569 9.0e-07 58.5 49 51.0
CSS0026673 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D008569 1.2e-06 58.2 105 39.0
Oeu012328.1 Olea europaea HOM05D000012 ORTHO05D008569 1.2e-06 58.2 51 47.1
QL07p035973 Quercus lobata HOM05D000012 ORTHO05D003972 1.2e-06 58.2 105 37.1
TWI63G0310 Tripterygium wilfordii HOM05D000012 ORTHO05D002345 1.2e-06 58.2 80 38.8
Nn2g11411 Nelumbo nucifera HOM05D000012 ORTHO05D003972 1.5e-06 57.8 64 50.0
Potri.008G061100 Populus trichocarpa HOM05D000012 ORTHO05D002345 1.5e-06 57.8 66 50.0
Cpa.g.sc177.25 Carica papaya HOM05D000012 ORTHO05D000540 2.6e-06 57.0 103 31.1
vmacro07028 Vaccinium macrocarpon HOM05D000012 ORTHO05D002345 2.6e-06 57.0 87 39.1
Carub.0002s1891 Capsella rubella HOM05D000012 ORTHO05D000540 3.4e-06 56.6 102 33.3
FAN12G2586 Fragaria x ananassa HOM05D000012 ORTHO05D008569 3.4e-06 56.6 60 50.0
CiPaw.09G200800 Carya illinoinensis HOM05D000012 ORTHO05D002345 4.5e-06 56.2 73 45.2
Ciclev10019504m.g Citrus clementina HOM05D000012 ORTHO05D008569 4.5e-06 56.2 86 36.0
Dinv16266 Davidia involucrata HOM05D000012 ORTHO05D002345 4.5e-06 56.2 80 42.5
Dinv34466 Davidia involucrata HOM05D000012 ORTHO05D002345 4.5e-06 56.2 83 41.0
FvH4_6g12770 Fragaria vesca HOM05D000012 ORTHO05D002345 4.5e-06 56.2 77 41.6
FAN02G1657 Fragaria x ananassa HOM05D000012 ORTHO05D002345 4.5e-06 56.2 77 41.6
FAN09G4752 Fragaria x ananassa HOM05D000012 ORTHO05D002345 4.5e-06 56.2 77 41.6
FAN14G0883 Fragaria x ananassa HOM05D000012 ORTHO05D002345 4.5e-06 56.2 77 41.6
Lsat_1_v5_gn_2_117381 Lactuca sativa HOM05D000012 ORTHO05D002345 4.5e-06 56.2 70 45.7
Lsat_1_v5_gn_8_99941 Lactuca sativa HOM05D000012 ORTHO05D003972 4.5e-06 56.2 94 36.2
RcHm_v2.0_Chr4g0422731 Rosa chinensis HOM05D000012 ORTHO05D008569 4.5e-06 56.2 96 40.6
TAR636G0546 Trochodendron aralioides HOM05D000012 ORTHO05D003972 4.5e-06 56.2 76 44.7
TAR636G3289 Trochodendron aralioides HOM05D000012 ORTHO05D002345 4.5e-06 56.2 87 41.4
Aqoxy4G02632 Aquilegia oxysepala HOM05D000012 ORTHO05D003972 5.8e-06 55.8 56 44.6
CiPaw.09G200900 Carya illinoinensis HOM05D000012 ORTHO05D002345 5.8e-06 55.8 73 45.2
Cc06_g01560 Coffea canephora HOM05D000012 ORTHO05D003972 5.8e-06 55.8 106 35.8
Duzib268G0929 Durio zibethinus HOM05D000012 ORTHO05D003972 5.8e-06 55.8 52 51.9
Thecc.02G327400 Theobroma cacao HOM05D000012 ORTHO05D003972 5.8e-06 55.8 70 44.3
TAR623G0349 Trochodendron aralioides HOM05D000012 ORTHO05D003972 5.8e-06 55.8 83 41.0
CiPaw.09G201100 Carya illinoinensis HOM05D000012 ORTHO05D002345 7.6e-06 55.5 70 45.7
Gohir.D12G163300 Gossypium hirsutum HOM05D000012 ORTHO05D003972 7.6e-06 55.5 113 32.7
PGSC0003DMG400011083 Solanum tuberosum HOM05D000012 ORTHO05D002345 7.6e-06 55.5 70 44.3
TAR623G0683 Trochodendron aralioides HOM05D000012 ORTHO05D003972 7.6e-06 55.5 76 44.7
FAN05G4750 Fragaria x ananassa HOM05D000012 ORTHO05D002345 9.9e-06 55.1 74 43.2
Lsat_1_v5_gn_2_3761 Lactuca sativa HOM05D000012 ORTHO05D003972 9.9e-06 55.1 94 36.2
Lj3A961T47 Lonicera japonica HOM05D000012 ORTHO05D002345 9.9e-06 55.1 67 47.8
Sed0021559 Sechium edule HOM05D000012 ORTHO05D002345 9.9e-06 55.1 60 38.3
Sc01g0004790 Simmondsia chinensis HOM05D000012 ORTHO05D002345 9.9e-06 55.1 70 44.3
TWI15G0622 Tripterygium wilfordii HOM05D000012 ORTHO05D002345 9.9e-06 55.1 67 44.8


User provided reference genes

Program Settings