Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 2.5e-84 315.5 163 100.0
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 7.4e-65 250.8 140 92.9
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 3.0e-58 228.8 157 79.6
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 1.7e-53 213.0 135 82.2
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 1.5e-49 199.9 126 82.5
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 7.4e-49 197.6 150 70.0
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 2.8e-48 195.7 156 67.9
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 2.8e-48 195.7 156 67.3
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 1.3e-45 186.8 155 61.3
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 1.7e-45 186.4 130 73.8
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 1.7e-45 186.4 130 72.3
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 1.7e-45 186.4 136 68.4
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 1.1e-44 183.7 140 66.4
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.1e-44 183.7 130 70.8
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 3.2e-44 182.2 130 69.2
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 1.2e-43 180.3 155 63.2
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 1.6e-43 179.9 137 65.7
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 2.1e-43 179.5 155 61.9
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 2.1e-43 179.5 136 65.4
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 3.6e-43 178.7 135 69.6
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 3.6e-43 178.7 135 68.1
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 4.7e-43 178.3 130 69.2
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 6.1e-43 177.9 135 67.4
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 8.0e-43 177.6 137 67.9
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 1.0e-42 177.2 150 62.0
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.0e-42 177.2 130 69.2
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.0e-42 177.2 132 68.9
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.8e-42 176.4 135 68.1
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.8e-42 176.4 135 68.1
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 2.3e-42 176.0 130 69.2
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 2.3e-42 176.0 130 71.5
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 3.0e-42 175.6 130 64.6
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 3.0e-42 175.6 130 70.0
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 3.0e-42 175.6 130 66.2
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 3.0e-42 175.6 130 66.2
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 4.0e-42 175.3 135 68.9
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 4.0e-42 175.3 135 69.6
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 5.2e-42 174.9 130 67.7
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 8.8e-42 174.1 130 69.2
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.2e-41 173.7 137 65.7
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.2e-41 173.7 136 65.4
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 2.0e-41 172.9 130 67.7
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 2.6e-41 172.6 148 64.2
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.6e-41 172.6 135 65.9
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 3.4e-41 172.2 135 65.9
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 7.5e-41 171.0 140 65.7
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 7.5e-41 171.0 135 67.4
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 9.7e-41 170.6 135 63.7
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 1.7e-40 169.9 136 64.0
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 1.7e-40 169.9 130 66.9
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 2.2e-40 169.5 136 66.2
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 2.8e-40 169.1 135 64.4
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 3.7e-40 168.7 137 65.0
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 3.7e-40 168.7 136 63.2
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.7e-40 168.7 130 63.8
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.7e-40 168.7 130 63.8
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 3.7e-40 168.7 135 65.9
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 3.7e-40 168.7 137 64.2
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 3.7e-40 168.7 135 66.7
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 4.8e-40 168.3 135 64.4
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 8.3e-40 167.5 136 62.5
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 8.3e-40 167.5 130 65.4
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 8.3e-40 167.5 135 65.2
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 8.3e-40 167.5 137 63.5
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 1.1e-39 167.2 136 65.4
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.4e-39 166.8 130 63.1
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 1.8e-39 166.4 130 63.8
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 4.1e-39 165.2 137 64.2
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 4.1e-39 165.2 130 64.6
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 4.1e-39 165.2 130 63.8
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 5.3e-39 164.9 139 64.0
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 5.3e-39 164.9 137 64.2
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 7.0e-39 164.5 136 62.5
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 9.1e-39 164.1 139 64.0
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 1.2e-38 163.7 139 62.6
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 1.2e-38 163.7 137 63.5
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 1.2e-38 163.7 130 65.4
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 1.6e-38 163.3 139 62.6
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 1.6e-38 163.3 139 62.6
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 1.6e-38 163.3 137 62.8
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 2.7e-38 162.5 137 63.5
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 2.7e-38 162.5 130 65.4
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 3.5e-38 162.2 130 61.5
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 3.5e-38 162.2 139 63.3
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 3.5e-38 162.2 130 63.8
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 3.5e-38 162.2 130 63.1
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 4.5e-38 161.8 130 62.3
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 4.5e-38 161.8 130 61.5
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 4.5e-38 161.8 130 65.4
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 1.7e-37 159.8 130 65.4
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 2.9e-37 159.1 136 61.8
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 1.5e-36 156.8 113 70.8
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 1.2e-35 153.7 130 59.2
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 4.7e-35 151.8 157 52.2
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.2e-33 147.1 103 71.8
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 2.6e-33 146.0 157 50.3
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 5.4e-31 138.3 156 51.3
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 3.5e-30 135.6 156 48.7
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 1.0e-29 134.0 130 55.4
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 2.9e-29 132.5 116 60.3
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 1.5e-25 120.2 161 43.5
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 1.1e-23 114.0 143 45.5
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 2.0e-22 109.8 145 43.4
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 5.9e-22 108.2 167 40.1
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 9.5e-20 100.9 120 47.5
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 2.8e-19 99.4 84 57.1
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 8.9e-18 94.4 65 75.4
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 4.1e-15 85.5 205 31.7
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 2.0e-14 83.2 84 45.2
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 4.6e-14 82.0 57 73.7
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 3.9e-13 79.0 89 58.4
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 1.2e-11 73.9 79 54.4
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 2.3e-10 69.7 113 35.4
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 1.5e-09 67.0 75 46.7
TPR.G25728 Trifolium pratense HOM05D002536 ORTHO05D006290 1.7e-08 63.5 58 48.3


User provided reference genes

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