Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.0e-40 169.5 77 100.0
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 3.8e-35 151.0 77 87.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 2.1e-33 145.2 77 84.4
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 3.5e-33 144.4 74 89.2
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.3e-32 141.7 77 80.5
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.0e-32 141.4 77 83.1
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 3.9e-32 141.0 77 80.5
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 3.9e-32 141.0 74 85.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 8.7e-32 139.8 77 81.8
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.5e-31 138.3 73 83.6
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 4.3e-31 137.5 73 79.5
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 4.3e-31 137.5 73 84.9
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 4.3e-31 137.5 74 79.7
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 4.3e-31 137.5 74 79.7
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 5.6e-31 137.1 77 77.9
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.3e-30 136.0 73 82.2
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.6e-30 135.6 77 79.2
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.6e-30 135.6 74 79.7
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.1e-30 135.2 77 74.0
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 2.8e-30 134.8 73 80.8
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 3.7e-30 134.4 74 83.8
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 4.8e-30 134.0 74 78.4
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 6.2e-30 133.7 77 76.6
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 8.1e-30 133.3 77 74.0
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 8.1e-30 133.3 72 83.3
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.4e-29 132.5 77 77.9
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.8e-29 132.1 68 86.8
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 2.4e-29 131.7 73 78.1
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 2.4e-29 131.7 77 75.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.1e-29 131.3 72 79.2
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.1e-29 131.3 77 76.6
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 3.1e-29 131.3 73 80.8
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 3.1e-29 131.3 74 77.0
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 4.0e-29 131.0 77 75.3
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 5.3e-29 130.6 77 80.5
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.9e-29 130.2 72 77.8
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 6.9e-29 130.2 75 77.3
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 6.9e-29 130.2 75 77.3
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 6.9e-29 130.2 75 77.3
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.2e-28 129.4 74 77.0
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.5e-28 129.0 71 80.3
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 2.0e-28 128.6 69 81.2
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 2.0e-28 128.6 74 77.0
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 3.4e-28 127.9 73 78.1
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.5e-28 127.5 73 75.3
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 5.8e-28 127.1 71 77.5
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 7.6e-28 126.7 73 75.3
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 1.0e-27 126.3 72 77.8
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.7e-27 125.6 73 74.0
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.2e-27 125.2 68 82.4
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.2e-27 125.2 72 76.4
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 2.2e-27 125.2 77 67.5
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 2.2e-27 125.2 77 67.5
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 2.9e-27 124.8 70 75.7
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 3.8e-27 124.4 68 82.4
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 4.9e-27 124.0 72 75.0
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 6.5e-27 123.6 70 75.7
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 6.5e-27 123.6 71 74.6
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 8.4e-27 123.2 72 76.4
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 8.4e-27 123.2 72 73.6
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 8.4e-27 123.2 77 72.7
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 8.4e-27 123.2 71 76.1
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.1e-26 122.9 70 74.3
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 3.2e-26 121.3 71 71.8
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 4.2e-26 120.9 75 69.3
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 5.5e-26 120.6 70 74.3
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 5.5e-26 120.6 67 76.1
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 5.5e-26 120.6 67 76.1
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 5.5e-26 120.6 68 79.4
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.1e-26 120.2 70 72.9
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 7.1e-26 120.2 71 64.8
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.7e-25 118.2 71 71.8
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.9e-25 116.7 71 73.2
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 7.9e-25 116.7 71 73.2
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 7.9e-25 116.7 71 73.2
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 7.9e-25 116.7 71 73.2
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.0e-24 116.3 71 71.8
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.8e-24 115.5 71 71.8
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 1.8e-24 115.5 65 78.5
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.8e-24 115.5 60 85.0
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.3e-24 115.2 71 70.4
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.3e-24 115.2 71 70.4
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.3e-24 115.2 71 70.4
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.3e-24 115.2 71 70.4
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.3e-24 115.2 71 70.4
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.3e-24 115.2 71 70.4
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 3.9e-24 114.4 69 75.4
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.1e-24 114.0 72 65.3
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.1e-24 114.0 72 65.3
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.1e-24 114.0 71 70.4
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.1e-24 114.0 71 70.4
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 6.7e-24 113.6 74 71.6
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 8.7e-24 113.2 71 70.4
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 8.7e-24 113.2 66 72.7
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 8.7e-24 113.2 71 67.6
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.1e-23 112.8 65 73.8
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.1e-23 112.8 65 73.8
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.1e-23 112.8 65 73.8
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.1e-23 112.8 72 65.3
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.3e-23 111.3 71 69.0
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.3e-23 111.3 72 65.3
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.3e-23 110.9 70 67.1
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 5.7e-23 110.5 64 76.6
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.6e-23 109.8 72 61.1
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 2.1e-22 108.6 68 67.6
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 2.1e-22 108.6 68 67.6
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.1e-22 108.6 72 61.1
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.8e-22 108.2 68 63.2
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 3.7e-22 107.8 71 70.4
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 3.7e-22 107.8 60 75.0
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.7e-22 107.8 68 63.2
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.1e-21 104.8 70 62.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.1e-21 104.8 70 62.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.1e-21 104.8 70 62.9
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.6e-20 101.7 65 67.7
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.5e-20 100.9 70 60.0
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.9e-19 98.2 70 52.9
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.1e-18 96.3 62 64.5
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-18 96.3 48 85.4
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 4.2e-18 94.4 75 60.0
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.1e-17 92.0 56 73.2
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 3.6e-09 64.7 68 47.1
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.1e-07 59.7 70 40.0
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 3.3e-07 58.2 68 39.7
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.7e-06 55.8 31 74.2
TAR371G0323 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.7e-06 54.7 30 73.3


User provided reference genes

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