Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 2.3e-196 688.7 351 100.0
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 2.8e-141 505.8 343 78.7
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 4.2e-33 146.4 357 30.8
QL11p003005 Quercus lobata HOM05D010066 ORTHO05D337193 1.4e-31 141.4 96 67.7
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 3.0e-31 140.2 294 33.7
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 6.3e-29 132.5 370 31.6
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 3.0e-23 113.6 373 27.9
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 6.8e-23 112.5 359 24.8
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 7.5e-22 109.0 310 31.6
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 7.5e-22 109.0 372 26.9
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 1.7e-21 107.8 316 31.6
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 3.7e-21 106.7 376 31.9
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 3.7e-21 106.7 376 31.9
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-20 104.0 375 27.5
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 4.1e-20 103.2 314 29.3
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 2.9e-18 97.1 351 25.6
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 3.6e-16 90.1 363 28.4
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.5e-14 84.7 317 25.9
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 7.5e-14 82.4 241 31.1
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 7.5e-14 82.4 361 26.9
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 3.2e-12 77.0 306 28.8
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 4.1e-12 76.6 257 27.6
QL11p055520 Quercus lobata HOM05D025344 ORTHO05D009743 4.1e-12 76.6 369 23.3
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 5.4e-12 76.3 263 25.9
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 1.0e-10 72.0 135 31.1
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 1.3e-10 71.6 268 30.6
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 1.7e-10 71.2 270 26.7
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.3e-10 70.9 264 25.8
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 2.3e-10 70.9 69 42.0
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-10 70.9 280 26.1
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-10 70.9 280 26.1
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 3.0e-10 70.5 298 26.5
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 3.0e-10 70.5 298 26.5
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.9e-10 70.1 277 24.2
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 3.9e-10 70.1 191 29.3
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.0e-10 69.7 140 27.9
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-09 68.6 205 26.8
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 2.5e-09 67.4 177 29.9
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.3e-09 67.0 249 26.1
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 3.3e-09 67.0 94 35.1
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.6e-09 66.2 93 39.8
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 5.6e-09 66.2 284 24.3
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 7.3e-09 65.9 238 27.3
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 9.5e-09 65.5 179 34.6
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 9.5e-09 65.5 142 32.4
A06p13420 Brassica napus HOM05D000249 ORTHO05D000206 1.2e-08 65.1 86 33.7
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-08 65.1 142 32.4
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 1.2e-08 65.1 194 29.4
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 1.2e-08 65.1 94 35.1
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 1.2e-08 65.1 268 29.5
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 2.1e-08 64.3 141 31.9
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 2.1e-08 64.3 69 42.0
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 2.8e-08 63.9 69 39.1
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 2.8e-08 63.9 69 42.0
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.8e-08 63.9 71 38.0
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.6e-08 63.5 267 24.3
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 3.6e-08 63.5 94 34.0
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 3.6e-08 63.5 152 30.9
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.6e-08 63.5 165 30.9
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 4.7e-08 63.2 66 47.0
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 6.2e-08 62.8 165 31.5
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 8.1e-08 62.4 69 40.6
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.1e-08 62.4 165 31.5
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.1e-08 62.4 165 31.5
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.1e-08 62.4 165 31.5
BraA09t39256Z Brassica rapa HOM05D000249 ORTHO05D000206 1.1e-07 62.0 67 43.3
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 1.1e-07 62.0 215 27.0
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.1e-07 62.0 82 36.6
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-07 62.0 80 35.0
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 1.8e-07 61.2 125 27.2
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.3e-07 60.8 132 27.3
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.1e-07 60.5 209 29.2
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.1e-07 60.5 209 29.2
CARHR041160 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.1e-07 60.5 67 41.8
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.1e-07 60.5 235 27.7
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.1e-07 60.5 131 27.5
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 4.0e-07 60.1 69 39.1
A06p43040 Brassica napus HOM05D000249 ORTHO05D000206 5.2e-07 59.7 74 36.5
BraA06t24494Z Brassica rapa HOM05D000249 ORTHO05D000206 5.2e-07 59.7 74 36.5
QL11p055703 Quercus lobata HOM05D033527 ORTHO05D009743 5.2e-07 59.7 107 30.8
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.2e-07 59.7 165 30.9
A08p23380 Brassica napus HOM05D000249 ORTHO05D000206 8.9e-07 58.9 67 40.3
C03p78250 Brassica napus HOM05D000249 ORTHO05D000206 8.9e-07 58.9 67 40.3
BolC3t20083H Brassica oleracea HOM05D000249 ORTHO05D000206 8.9e-07 58.9 67 40.3
BraA08t34292Z Brassica rapa HOM05D000249 ORTHO05D000206 8.9e-07 58.9 67 40.3
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 8.9e-07 58.9 109 29.4
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 2.0e-06 57.8 330 22.7
Carub.0007s2189 Capsella rubella HOM05D000249 ORTHO05D000206 2.6e-06 57.4 68 44.1
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.4e-06 57.0 91 31.9
C03p78270 Brassica napus HOM05D000249 ORTHO05D000206 4.4e-06 56.6 67 40.3
BolC3t20085H Brassica oleracea HOM05D000249 ORTHO05D000206 4.4e-06 56.6 67 40.3
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 4.4e-06 56.6 203 28.6
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 4.4e-06 56.6 331 23.0
Carub.0002s0602 Capsella rubella HOM05D000249 ORTHO05D000206 5.8e-06 56.2 71 38.0
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.8e-06 56.2 205 26.3
CARHR221070 Cardamine hirsuta HOM05D000249 ORTHO05D000206 7.5e-06 55.8 140 29.3
Sp7g29610 Schrenkiella parvula HOM05D000249 ORTHO05D000206 9.8e-06 55.5 100 34.0


User provided reference genes

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