Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 4.2e-59 231.1 112 100.0
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 4.2e-59 231.1 112 100.0
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 1.5e-32 142.9 115 67.0
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 1.5e-32 142.9 113 62.8
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 2.6e-29 132.1 113 60.2
CiPaw.02G125200 Carya illinoinensis HOM05D007257 ORTHO05D008924 1.9e-27 125.9 83 73.5
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 6.1e-26 120.9 116 60.3
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 1.8e-25 119.4 112 59.8
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 4.1e-22 108.2 119 52.9
EL10Ac3g06173 Beta vulgaris HOM05D007257 ORTHO05D008924 3.5e-21 105.1 129 44.2
Dinv24749 Davidia involucrata HOM05D007257 ORTHO05D008924 2.9e-20 102.1 76 65.8
Dinv33249 Davidia involucrata HOM05D008933 ORTHO05D011098 2.9e-20 102.1 77 66.2
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 3.8e-20 101.7 111 50.5
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 3.8e-20 101.7 111 50.5
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 6.5e-20 100.9 124 49.2
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 6.5e-20 100.9 118 48.3
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.5e-19 99.8 111 49.5
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 7.2e-19 97.4 114 46.5
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 2.1e-18 95.9 119 48.7
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 3.6e-18 95.1 126 45.2
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 3.6e-18 95.1 125 44.0
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 1.0e-17 93.6 114 50.0
Nn7g37449 Nelumbo nucifera HOM05D007257 ORTHO05D008924 1.4e-17 93.2 113 44.2
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.4e-17 93.2 117 46.2
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 4.0e-17 91.7 124 46.8
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 5.2e-17 91.3 117 46.2
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 5.2e-17 91.3 116 46.6
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 6.7e-17 90.9 108 49.1
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 8.8e-17 90.5 121 43.8
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 1.5e-16 89.7 115 43.5
TAR365G0873 Trochodendron aralioides HOM05D007257 ORTHO05D008924 2.0e-16 89.4 109 45.0
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 2.6e-16 89.0 112 47.3
Sc13g0007600 Simmondsia chinensis HOM05D007257 ORTHO05D008924 2.6e-16 89.0 119 42.0
Ah.07g203290 Amaranthus hybridus HOM05D007257 ORTHO05D008924 3.3e-16 88.6 126 44.4
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 5.7e-16 87.8 121 38.8
Rhsim09G0003300 Rhododendron simsii HOM05D007257 ORTHO05D008924 9.7e-16 87.0 112 42.9
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 6.3e-15 84.3 117 47.9
AUR62002488 Chenopodium quinoa HOM05D007257 ORTHO05D008924 8.2e-15 84.0 115 43.5
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 8.2e-15 84.0 118 44.1
Nn1g09433 Nelumbo nucifera HOM05D007257 ORTHO05D008924 1.4e-14 83.2 114 43.0
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 2.4e-14 82.4 111 45.9
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 3.1e-14 82.0 119 46.2
Potri.017G002100 Populus trichocarpa HOM05D007257 ORTHO05D008924 3.1e-14 82.0 108 46.3
Sabra07G0115500 Salix brachista HOM05D007257 ORTHO05D008924 3.1e-14 82.0 108 45.4
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 7.0e-14 80.9 117 39.3
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 9.1e-14 80.5 123 43.1
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 2.0e-13 79.3 111 43.2
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 2.7e-13 79.0 112 42.0
Sopen12g032450 Solanum pennellii HOM05D007257 ORTHO05D008924 4.5e-13 78.2 122 40.2
Psat5g055880 Pisum sativum HOM05D007257 ORTHO05D008924 7.7e-13 77.4 115 45.2
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 1.7e-12 76.3 115 42.6
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 1.7e-12 76.3 117 41.9
A05p04160 Brassica napus HOM05D007257 ORTHO05D008924 2.9e-12 75.5 118 38.1
BraA05t19402Z Brassica rapa HOM05D007257 ORTHO05D008924 2.9e-12 75.5 118 38.1
Phvul.002G279900 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 3.8e-12 75.1 113 40.7
AL5G42000 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 6.5e-12 74.3 127 40.2
BolC4t22123H Brassica oleracea HOM05D007257 ORTHO05D008924 6.5e-12 74.3 118 38.1
SGA_v2.0_scaffold12G06221 Striga asiatica HOM05D007257 ORTHO05D008924 6.5e-12 74.3 114 43.0
BcaC02g12345 Brassica carinata HOM05D007257 ORTHO05D008924 8.5e-12 73.9 118 38.1
Sp5g03270 Schrenkiella parvula HOM05D007257 ORTHO05D008924 8.5e-12 73.9 121 40.5
AT3G59880 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 1.1e-11 73.6 124 39.5
Sp4g26100 Schrenkiella parvula HOM05D007257 ORTHO05D008924 1.1e-11 73.6 117 40.2
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 1.9e-11 72.8 122 37.7
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 2.5e-11 72.4 72 52.8
A09p52160 Brassica napus HOM05D007257 ORTHO05D008924 2.5e-11 72.4 124 37.9
BraA09t40647Z Brassica rapa HOM05D007257 ORTHO05D008924 2.5e-11 72.4 124 37.9
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 2.5e-11 72.4 118 39.0
C04p04930 Brassica napus HOM05D007257 ORTHO05D008924 3.2e-11 72.0 118 37.3
TPR.G7792 Trifolium pratense HOM05D007257 ORTHO05D008924 5.5e-11 71.2 112 40.2
BcaC07g40552 Brassica carinata HOM05D007257 ORTHO05D008924 1.2e-10 70.1 124 37.9
C08p34830 Brassica napus HOM05D007257 ORTHO05D008924 1.2e-10 70.1 124 37.9
CARHR139190 Cardamine hirsuta HOM05D007257 ORTHO05D008924 1.2e-10 70.1 118 36.4
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla HOM05D007257 ORTHO05D008924 1.2e-10 70.1 77 46.8
Sabra17G0006100 Salix brachista HOM05D007257 ORTHO05D008924 1.2e-10 70.1 85 49.4
Thhalv10001750m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 2.1e-10 69.3 119 40.3
BcaC07g40438 Brassica carinata HOM05D007257 ORTHO05D008924 2.7e-10 68.9 127 40.9
BolC8t51085H Brassica oleracea HOM05D007257 ORTHO05D008924 2.7e-10 68.9 124 37.9
CARHR170210 Cardamine hirsuta HOM05D007257 ORTHO05D008924 1.0e-09 67.0 124 38.7
AL4G42890 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 1.8e-09 66.2 115 38.3
Sed0023616 Sechium edule HOM05D007257 ORTHO05D008924 1.8e-09 66.2 122 40.2
MELO3C008506.2 Cucumis melo HOM05D007257 ORTHO05D008924 2.3e-09 65.9 128 38.3
Prupe.7G270300 Prunus persica HOM05D007257 ORTHO05D008924 2.3e-09 65.9 161 36.6
Glyma.08G006200 Glycine max HOM05D007257 ORTHO05D008924 4.0e-09 65.1 124 37.9
Oeu039258.1 Olea europaea HOM05D007257 ORTHO05D008924 4.0e-09 65.1 90 43.3
Peaxi162Scf00057g00224 Petunia axillaris HOM05D007257 ORTHO05D008924 4.0e-09 65.1 119 39.5
AT2G44010 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 5.2e-09 64.7 115 37.4
Carub.0005s2662 Capsella rubella HOM05D007257 ORTHO05D008924 5.2e-09 64.7 122 40.2
CsaV3_2G011240 Cucumis sativus L. HOM05D007257 ORTHO05D008924 5.2e-09 64.7 122 37.7
BcaB02g08925 Brassica carinata HOM05D007257 ORTHO05D008924 6.8e-09 64.3 116 37.9
ClCG06G009780 Citrullus lanatus HOM05D007257 ORTHO05D008924 6.8e-09 64.3 125 37.6
ATR0743G073 Amborella trichopoda HOM05D007257 ORTHO05D008924 8.8e-09 63.9 117 36.8
Carub.0004s2657 Capsella rubella HOM05D007257 ORTHO05D008924 2.0e-08 62.8 118 35.6
CANSAT01G1842 Cannabis sativa HOM05D007257 ORTHO05D008924 2.6e-08 62.4 124 41.1
Aa31LG10G14120 Aethionema arabicum HOM05D007257 ORTHO05D008924 2.2e-07 59.3 115 39.1
PGSC0003DMG400020384 Solanum tuberosum HOM05D007257 ORTHO05D008924 2.2e-07 59.3 115 37.4
Sopen12g009180 Solanum pennellii HOM05D007257 ORTHO05D008924 2.8e-07 58.9 112 35.7
Nn1g09434 Nelumbo nucifera HOM05D007257 ORTHO05D008924 3.7e-07 58.5 116 32.8
BcaC01g05192 Brassica carinata HOM05D007257 ORTHO05D008924 1.1e-06 57.0 111 36.0
Thhalv10006503m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 1.1e-06 57.0 131 36.6
BraA03t11669Z Brassica rapa HOM05D007257 ORTHO05D008924 2.4e-06 55.8 118 33.9
FvH4_1g00150 Fragaria vesca HOM05D027933 ORTHO05D029598 2.4e-06 55.8 145 33.1
FAN28G1760 Fragaria x ananassa HOM05D027933 ORTHO05D029598 2.4e-06 55.8 145 33.1
Solyc12g017960.1 Solanum lycopersicum HOM05D007257 ORTHO05D008924 3.1e-06 55.5 112 35.7


User provided reference genes

Program Settings