Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 0.0e+00 1342.0 694 100.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 0.0e+00 1293.1 695 96.3
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 1.1e-247 860.1 702 69.4
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 2.1e-241 839.3 704 68.2
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 8.2e-222 774.2 689 65.5
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 8.9e-184 647.9 377 93.6
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 4.0e-176 622.5 701 55.9
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 8.7e-155 551.6 708 51.7
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.1e-154 551.2 730 51.0
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 1.1e-144 518.1 731 49.1
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 6.4e-142 508.8 709 49.1
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.2e-140 504.6 706 50.0
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.2e-140 504.6 706 50.0
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 6.0e-140 502.3 704 49.1
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 1.3e-139 501.1 689 47.3
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.5e-135 487.6 730 47.8
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.9e-135 485.0 703 47.8
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 3.8e-134 483.0 693 48.3
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.2e-132 478.0 713 47.4
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 3.5e-132 476.5 718 46.5
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 4.6e-132 476.1 703 48.2
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 2.4e-128 463.8 682 46.9
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.3e-126 458.0 673 46.7
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 6.5e-126 455.7 727 45.8
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 7.9e-124 448.7 677 47.1
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 1.5e-122 444.5 703 45.8
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 6.5e-118 429.1 713 44.9
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 1.4e-115 421.4 668 44.3
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.3e-113 414.8 710 43.2
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 2.6e-111 407.1 677 43.3
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 9.4e-109 398.7 702 43.0
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 9.4e-109 398.7 743 41.6
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 1.4e-107 394.8 712 42.0
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 3.9e-107 393.3 666 43.8
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 1.5e-106 391.3 646 43.8
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 3.7e-105 386.7 650 42.8
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.4e-104 384.8 659 44.5
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 5.3e-104 382.9 705 42.3
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 5.9e-103 379.4 697 41.3
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 7.2e-101 372.5 658 42.4
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 8.0e-100 369.0 710 41.5
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 1.0e-99 368.6 650 42.6
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 5.7e-98 362.8 602 41.4
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.2e-95 355.1 583 42.7
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 3.5e-95 353.6 584 45.5
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 1.3e-94 351.7 674 40.7
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 3.8e-94 350.1 694 40.9
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 1.6e-92 344.7 664 40.2
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.0e-91 342.0 702 39.2
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 3.3e-90 337.0 700 40.7
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 3.3e-90 337.0 712 40.0
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.7e-87 327.4 652 38.8
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 5.9e-87 326.2 460 48.0
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.6e-84 318.2 700 38.9
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.7e-84 317.4 735 37.0
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.4e-83 315.1 674 38.0
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.7e-81 308.1 535 42.1
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 6.3e-81 306.2 704 38.2
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 1.1e-80 305.4 705 37.7
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.0e-78 298.9 636 37.7
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 2.9e-78 297.4 599 38.6
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 6.8e-75 286.2 718 35.0
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.2e-71 275.4 682 35.3
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 5.9e-71 273.1 676 35.1
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 4.3e-69 266.9 682 35.9
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 5.2e-67 260.0 673 35.4
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 1.1e-64 252.3 672 35.0
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.4e-64 251.9 479 40.1
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.7e-63 247.7 607 37.1
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 3.5e-63 247.3 708 32.5
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 6.0e-63 246.5 699 34.6
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 3.0e-62 244.2 706 35.0
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 3.3e-61 240.7 574 34.8
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 9.5e-61 239.2 679 33.4
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 4.7e-60 236.9 716 34.6
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 6.2e-60 236.5 615 35.0
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 4.0e-59 233.8 716 33.0
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 1.3e-57 228.8 719 33.9
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 1.7e-57 228.4 486 36.6
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 1.2e-55 222.2 720 32.5
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.0e-54 219.2 303 44.6
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.0e-54 219.2 716 33.8
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 1.3e-49 202.2 860 30.5
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 1.1e-48 199.1 493 36.7
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 1.4e-48 198.7 654 32.1
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 3.2e-48 197.6 722 32.3
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 3.1e-43 181.0 673 31.8
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 6.8e-43 179.9 480 32.3
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 3.4e-42 177.6 594 33.3
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 2.5e-37 161.4 742 27.4
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 3.6e-36 157.5 501 32.9
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 5.3e-35 153.7 681 29.7
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 1.3e-33 149.1 516 32.9
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 2.2e-33 148.3 693 28.1
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 6.4e-33 146.7 652 30.5
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 8.4e-33 146.4 594 31.0
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 7.1e-32 143.3 528 33.9
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 1.1e-29 136.0 486 33.7
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 2.5e-29 134.8 685 28.6
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 6.4e-25 120.2 483 29.6
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 8.4e-25 119.8 541 27.2
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 4.2e-24 117.5 602 29.4
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 8.7e-22 109.8 479 26.9
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 1.9e-16 92.0 396 29.3
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 4.0e-11 74.3 925 23.5
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 1.3e-09 69.3 282 27.0
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 1.3e-09 69.3 195 33.8
Zm00001eb317370 Zea mays HOM05D019859 ORTHO05D008940 5.1e-06 57.4 107 33.6
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 5.1e-06 57.4 107 33.6


User provided reference genes

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