Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p064677 Quercus lobata HOM05D004281 ORTHO05D004839 1.8e-96 355.9 178 100.0
QL10p065802 Quercus lobata HOM05D004281 ORTHO05D004839 8.9e-72 273.9 140 99.3
CiPaw.01G202700 Carya illinoinensis HOM05D004281 ORTHO05D004839 2.2e-62 242.7 139 86.3
VMungo0251G0005 Vigna mungo HOM05D004281 ORTHO05D004839 5.4e-61 238.0 139 86.3
TWI15G0067 Tripterygium wilfordii HOM05D004281 ORTHO05D004839 7.1e-61 237.7 139 84.9
Eucgr.L01202 Eucalyptus grandis HOM05D004281 ORTHO05D004839 1.6e-60 236.5 139 83.5
Dinv24743 Davidia involucrata HOM05D004281 ORTHO05D004839 3.5e-60 235.3 140 84.3
Prupe.7G270800 Prunus persica HOM05D004281 ORTHO05D004839 3.5e-60 235.3 140 82.9
Atru.chr3.1980 Acer truncatum HOM05D004281 ORTHO05D004839 4.6e-60 235.0 139 82.0
Phvul.002G189800 Phaseolus vulgaris HOM05D004281 ORTHO05D004839 6.0e-60 234.6 139 84.9
Eucgr.F02801 Eucalyptus grandis HOM05D004281 ORTHO05D004839 7.8e-60 234.2 139 84.2
GSVIVG01038261001 Vitis vinifera HOM05D004281 ORTHO05D004839 7.8e-60 234.2 140 83.6
CANSAT78G2301 Cannabis sativa HOM05D004281 ORTHO05D004839 1.0e-59 233.8 140 82.1
Gohir.A04G135700 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.3e-59 233.4 140 82.1
Gohir.D04G178800 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.3e-59 233.4 140 82.1
Gohir.D11G011300 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.3e-59 233.4 140 82.9
Gorai.007G012700 Gossypium raimondii HOM05D004281 ORTHO05D004839 1.3e-59 233.4 140 82.9
Gorai.012G171900 Gossypium raimondii HOM05D004281 ORTHO05D004839 1.3e-59 233.4 140 82.1
RcHm_v2.0_Chr2g0084411 Rosa chinensis HOM05D004281 ORTHO05D004839 1.3e-59 233.4 140 82.1
CSS0013668 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.7e-59 233.0 139 84.2
CSS0036502 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.7e-59 233.0 139 84.2
COL.COLO4_27572 Corchorus olitorius HOM05D004281 ORTHO05D004839 1.7e-59 233.0 140 82.1
Gohir.A11G012100 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.7e-59 233.0 140 82.9
arahy.Tifrunner.gnm1.ann1.MYV34H Arachis hypogaea HOM05D004281 ORTHO05D004839 3.9e-59 231.9 139 82.0
Thecc.05G001000 Theobroma cacao HOM05D004281 ORTHO05D004839 6.6e-59 231.1 140 80.7
Lalb_Chr12g0209091 Lupinus albus HOM05D004281 ORTHO05D004839 1.1e-58 230.3 139 82.0
Oeu014981.1 Olea europaea HOM05D004281 ORTHO05D004839 1.1e-58 230.3 139 82.0
TAR365G0664 Trochodendron aralioides HOM05D004281 ORTHO05D004839 1.1e-58 230.3 140 82.9
Psat5g058760 Pisum sativum HOM05D004281 ORTHO05D004839 1.5e-58 229.9 139 82.0
vmacro00726 Vaccinium macrocarpon HOM05D004281 ORTHO05D004839 1.5e-58 229.9 139 82.7
arahy.Tifrunner.gnm1.ann1.HHGT95 Arachis hypogaea HOM05D004281 ORTHO05D004839 1.9e-58 229.6 139 81.3
Rhsim09G0002300 Rhododendron simsii HOM05D000705 ORTHO05D002970 1.9e-58 229.6 139 82.0
FvH4_1g00110 Fragaria vesca HOM05D004281 ORTHO05D004839 3.3e-58 228.8 140 80.7
Glyma.08G087500 Glycine max HOM05D004281 ORTHO05D004839 3.3e-58 228.8 139 82.0
Lalb_Chr13g0292401 Lupinus albus HOM05D004281 ORTHO05D004839 3.3e-58 228.8 139 81.3
Manes.02G102600 Manihot esculenta HOM05D004281 ORTHO05D004839 3.3e-58 228.8 140 80.0
MD15G1142400 Malus domestica HOM05D004281 ORTHO05D004839 4.3e-58 228.4 140 78.6
Nn1g09410 Nelumbo nucifera HOM05D004281 ORTHO05D004839 5.6e-58 228.0 140 81.4
FvH4_2g10600 Fragaria vesca HOM05D004281 ORTHO05D004839 9.6e-58 227.3 140 81.4
FAN24G2282 Fragaria x ananassa HOM05D004281 ORTHO05D004839 9.6e-58 227.3 140 81.4
Medtr4g094700 Medicago truncatula HOM05D004281 ORTHO05D004839 9.6e-58 227.3 139 79.1
THA.LOC104804375 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 9.6e-58 227.3 139 79.1
Actinidia18388 Actinidia chinensis HOM05D004281 ORTHO05D004839 1.3e-57 226.9 139 82.0
Psat7g088840 Pisum sativum HOM05D004281 ORTHO05D004839 1.3e-57 226.9 139 80.6
Ciclev10022149m.g Citrus clementina HOM05D004281 ORTHO05D004839 1.6e-57 226.5 139 79.1
Potri.017G001800 Populus trichocarpa HOM05D004281 ORTHO05D004839 1.6e-57 226.5 139 78.4
Ca_18245_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 2.1e-57 226.1 139 79.9
PGR142G2669 Punica granatum HOM05D004281 ORTHO05D004839 2.1e-57 226.1 139 79.9
MSTRG.24546 Avicennia marina HOM05D004281 ORTHO05D004839 2.8e-57 225.7 139 77.0
FAN15G1026 Fragaria x ananassa HOM05D004281 ORTHO05D004839 2.8e-57 225.7 140 80.7
Sabra17G0005800 Salix brachista HOM05D004281 ORTHO05D004839 2.8e-57 225.7 139 78.4
Cc00_g16880 Coffea canephora HOM05D004281 ORTHO05D004839 6.2e-57 224.6 140 79.3
CDE09G0590 Ceratophyllum demersum HOM05D004281 ORTHO05D004839 8.1e-57 224.2 140 77.9
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.1e-56 223.8 126 87.3
Haze_11113 Corylus avellana HOM05D004281 ORTHO05D004839 1.1e-56 223.8 126 87.3
Migut.G00913 Erythranthe guttata HOM05D004281 ORTHO05D004839 1.1e-56 223.8 139 77.7
FAN26G2986 Fragaria x ananassa HOM05D000705 ORTHO05D004839 1.1e-56 223.8 140 80.0
Atru.chr8.1217 Acer truncatum HOM05D004281 ORTHO05D004839 2.4e-56 222.6 139 76.3
Ah.13g073140 Amaranthus hybridus HOM05D000705 ORTHO05D004839 2.4e-56 222.6 149 75.8
Solyc12g096590.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 5.3e-56 221.5 139 77.7
Sopen12g032420 Solanum pennellii HOM05D004281 ORTHO05D004839 5.3e-56 221.5 139 77.7
Carub.0004s2660 Capsella rubella HOM05D004281 ORTHO05D004839 6.9e-56 221.1 139 75.5
ECA233G0955 Erigeron canadensis HOM05D004281 ORTHO05D004839 6.9e-56 221.1 139 77.0
Lj4g0008259 Lotus japonicus HOM05D004281 ORTHO05D004839 9.0e-56 220.7 139 78.4
Aa31LG10G14140 Aethionema arabicum HOM05D004281 ORTHO05D004839 1.2e-55 220.3 139 76.3
BcaB06g29512 Brassica carinata HOM05D004281 ORTHO05D004839 1.2e-55 220.3 139 74.8
BcaC02g07139 Brassica carinata HOM05D004281 ORTHO05D004839 1.2e-55 220.3 139 74.8
C04p70870 Brassica napus HOM05D001249 ORTHO05D003440 1.2e-55 220.3 139 74.8
BolC4t28587H Brassica oleracea HOM05D004281 ORTHO05D004839 1.2e-55 220.3 139 74.8
Potri.007G146000 Populus trichocarpa HOM05D004281 ORTHO05D004839 1.2e-55 220.3 139 78.4
THA.LOC104802349 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 1.2e-55 220.3 139 76.3
HanXRQChr13g0392191 Helianthus annuus HOM05D004281 ORTHO05D004839 1.5e-55 219.9 139 75.5
Thhalv10001807m.g Eutrema salsugineum HOM05D004281 ORTHO05D004839 2.0e-55 219.5 139 74.8
PSO675G2617 Papaver somniferum HOM05D004281 ORTHO05D004839 2.0e-55 219.5 140 76.4
Sp4g26130 Schrenkiella parvula HOM05D004281 ORTHO05D004839 2.0e-55 219.5 139 74.8
PGSC0003DMG400029273 Solanum tuberosum HOM05D004281 ORTHO05D004839 2.0e-55 219.5 139 77.7
BcaB06g29353 Brassica carinata HOM05D004281 ORTHO05D004839 2.6e-55 219.2 139 74.8
Aa31LG1G25720 Aethionema arabicum HOM05D004281 ORTHO05D004839 3.4e-55 218.8 139 74.8
Aqoxy7G00623 Aquilegia oxysepala HOM05D004281 ORTHO05D004839 3.4e-55 218.8 140 76.4
A03p24650 Brassica napus HOM05D004281 ORTHO05D004839 3.4e-55 218.8 139 74.8
BolC3t15286H Brassica oleracea HOM05D004281 ORTHO05D004839 3.4e-55 218.8 139 74.8
BraA03t11671Z Brassica rapa HOM05D004281 ORTHO05D004839 3.4e-55 218.8 139 74.8
AL4G42920 Arabidopsis lyrata HOM05D004281 ORTHO05D004839 4.5e-55 218.4 139 74.8
PGR142G1214 Punica granatum HOM05D004281 ORTHO05D004839 5.8e-55 218.0 139 77.7
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 7.6e-55 217.6 139 77.0
AT2G44050 Arabidopsis thaliana HOM05D004281 ORTHO05D004839 9.9e-55 217.2 139 74.1
BcaB01g03334 Brassica carinata HOM05D004281 ORTHO05D004839 1.3e-54 216.9 139 74.1
A04p33170 Brassica napus HOM05D004281 ORTHO05D004839 1.3e-54 216.9 139 74.1
BraA04t18776Z Brassica rapa HOM05D004281 ORTHO05D004839 1.3e-54 216.9 139 74.1
CARHR139210 Cardamine hirsuta HOM05D004281 ORTHO05D004839 1.3e-54 216.9 139 74.1
Nitab4.5_0000668g0110 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.3e-54 216.9 141 76.6
PSO732G0016 Papaver somniferum HOM05D004281 ORTHO05D004839 1.3e-54 216.9 140 77.1
BcaC01g05189 Brassica carinata HOM05D001249 ORTHO05D003440 1.7e-54 216.5 139 74.8
CAN.G566.44 Capsicum annuum HOM05D004281 ORTHO05D004839 1.7e-54 216.5 139 75.5
Nitab4.5_0001110g0040 Nicotiana tabacum HOM05D004281 ORTHO05D004839 2.2e-54 216.1 141 76.6
Peaxi162Scf00459g00125 Petunia axillaris HOM05D004281 ORTHO05D004839 2.2e-54 216.1 139 76.3
CAN.G607.11 Capsicum annuum HOM05D004281 ORTHO05D004839 2.9e-54 215.7 139 74.8
AUR62023693 Chenopodium quinoa HOM05D004281 ORTHO05D004839 2.9e-54 215.7 139 74.8
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.9e-54 215.7 129 81.4
SGA_v2.0_scaffold37G14906 Striga asiatica HOM05D004281 ORTHO05D004839 2.9e-54 215.7 127 82.7
EL10Ac3g06178 Beta vulgaris HOM05D004281 ORTHO05D004839 3.8e-54 215.3 139 74.8
EL10Ac4g08581 Beta vulgaris HOM05D004281 ORTHO05D004839 4.9e-54 214.9 139 74.1
Lsat_1_v5_gn_8_33320 Lactuca sativa HOM05D004281 ORTHO05D004839 4.9e-54 214.9 139 73.4
RcHm_v2.0_Chr7g0227511 Rosa chinensis HOM05D004281 ORTHO05D004839 4.9e-54 214.9 126 82.5
Sopen08g005770 Solanum pennellii HOM05D004281 ORTHO05D004839 4.9e-54 214.9 139 74.8
TPR.G31246 Trifolium pratense HOM05D004281 ORTHO05D004839 4.9e-54 214.9 126 83.3
Cc05_g03580 Coffea canephora HOM05D004281 ORTHO05D004839 8.4e-54 214.2 139 76.3
Solyc08g015660.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 1.1e-53 213.8 139 74.1
PGSC0003DMG400025217 Solanum tuberosum HOM05D004281 ORTHO05D004839 1.1e-53 213.8 139 74.1
Lj4A426G8 Lonicera japonica HOM05D004281 ORTHO05D004839 1.9e-53 213.0 126 82.5
Os04g0497400 Oryza sativa ssp. japonica HOM05D004281 ORTHO05D004839 2.4e-53 212.6 140 76.4
HanXRQChr13g0392171 Helianthus annuus HOM05D004281 ORTHO05D004839 3.2e-53 212.2 139 73.4
Lsat_1_v5_gn_8_33340 Lactuca sativa HOM05D004281 ORTHO05D004839 3.2e-53 212.2 127 80.3
unitig_578.g16718 Utricularia gibba HOM05D000499 ORTHO05D007471 5.4e-53 211.5 139 74.8
HPP92_005601 Vanilla planifolia HOM05D004281 ORTHO05D004839 7.1e-53 211.1 140 75.7
Sed0022244 Sechium edule HOM05D004281 ORTHO05D004839 9.3e-53 210.7 140 75.0
ClCG08G010210 Citrullus lanatus HOM05D004281 ORTHO05D004839 1.0e-51 207.2 126 78.6
CsaV3_6G032410 Cucumis sativus L. HOM05D004281 ORTHO05D004839 1.0e-51 207.2 139 73.4
Zm00001eb068110 Zea mays HOM05D004281 ORTHO05D004839 1.8e-51 206.5 140 71.4
AUR62002492 Chenopodium quinoa HOM05D004281 ORTHO05D004839 3.0e-51 205.7 155 67.7
Sed0015421 Sechium edule HOM05D004281 ORTHO05D004839 3.9e-51 205.3 139 72.7
Nitab4.5_0001091g0070 Nicotiana tabacum HOM05D004281 ORTHO05D004839 5.1e-51 204.9 139 71.9
ATR0743G183 Amborella trichopoda HOM05D004281 ORTHO05D004839 6.7e-51 204.5 126 77.0
C03p29390 Brassica napus HOM05D004281 ORTHO05D004839 8.7e-51 204.1 160 65.0
Zm00001eb432360 Zea mays HOM05D004281 ORTHO05D004839 3.3e-50 202.2 140 70.0
MELO3C011439.2 Cucumis melo HOM05D004281 ORTHO05D004839 6.9e-48 194.5 140 68.6
SMO198G0030 Selaginella moellendorffii HOM05D004281 ORTHO05D004839 7.6e-47 191.0 139 64.7
Pp3c27_2710 Physcomitrium patens HOM05D004281 ORTHO05D004839 6.4e-46 188.0 139 64.0
Pp3c16_5700 Physcomitrium patens HOM05D004281 ORTHO05D004839 1.4e-45 186.8 139 66.2
Cpa.g.sc9.245 Carica papaya HOM05D004281 ORTHO05D004839 1.9e-45 186.4 142 69.7
Mapoly0120s0006 Marchantia polymorpha HOM05D004281 ORTHO05D004839 3.2e-45 185.7 139 65.5
Nitab4.5_0004802g0010 Nicotiana tabacum HOM05D004281 ORTHO05D004839 5.5e-45 184.9 125 71.2
QL08p018116 Quercus lobata HOM05D004281 ORTHO05D004839 3.5e-44 182.2 104 88.5
TPR.G18090 Trifolium pratense HOM05D004281 ORTHO05D004839 3.0e-43 179.1 120 75.8
Duzib212G0492 Durio zibethinus HOM05D004281 ORTHO05D004839 4.3e-42 175.3 106 81.1
Sc13g0007610 Simmondsia chinensis HOM05D004281 ORTHO05D004839 3.1e-40 169.1 109 76.1
RcHm_v2.0_Chr7g0214271 Rosa chinensis HOM05D004281 ORTHO05D004839 4.0e-40 168.7 96 85.4
Cre02.g088850 Chlamydomonas reinhardtii HOM05D004281 ORTHO05D004839 1.2e-39 167.2 139 59.0
Hund22685 Selenicereus undatus HOM05D001165 ORTHO05D004839 1.5e-39 166.8 94 80.9
BcaB01g03343 Brassica carinata HOM05D001249 ORTHO05D003440 1.0e-38 164.1 124 66.1
CBR_g29269 Chara braunii HOM05D004281 ORTHO05D004839 3.8e-38 162.2 133 55.6
Nitab4.5_0010298g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 4.9e-38 161.8 94 80.9
MBI07_g44299_MAGBIO Magnolia biondii HOM05D004281 ORTHO05D004839 1.2e-36 157.1 105 74.3
unitig_85.g27225 Utricularia gibba HOM05D004281 ORTHO05D004839 6.0e-36 154.8 94 79.8
Nitab4.5_0000013g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 6.7e-35 151.4 104 73.1
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 6.9e-32 141.4 131 51.1
Cc00_g08810 Coffea canephora HOM05D004281 ORTHO05D004839 3.4e-31 139.0 77 87.0
Lj5A837G66 Lonicera japonica HOM05D004281 ORTHO05D004839 1.0e-30 137.5 74 86.5
Ca_28575_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 2.5e-29 132.9 135 48.1
Duzib093G0607 Durio zibethinus HOM05D004281 ORTHO05D004839 1.2e-28 130.6 79 79.7
CSS0034557 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 9.7e-26 120.9 114 59.6
Cc00_g12430 Coffea canephora HOM05D004281 ORTHO05D004839 4.8e-25 118.6 65 89.2
CSS0024434 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.8e-24 116.7 160 46.9
CSS0012879 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.2e-23 114.0 137 52.6
Cc00_g34060 Coffea canephora HOM05D004281 ORTHO05D004839 7.7e-23 111.3 72 76.4
Cc00_g23590 Coffea canephora HOM05D004281 ORTHO05D004839 2.2e-22 109.8 79 69.6
TAR362G0423 Trochodendron aralioides HOM05D004281 ORTHO05D004839 2.5e-21 106.3 80 70.0
C08p46660 Brassica napus HOM05D004281 ORTHO05D004839 2.0e-18 96.7 67 64.2
C05p19750 Brassica napus HOM05D004281 ORTHO05D004839 1.3e-17 94.0 65 63.1
BolC8t52208H Brassica oleracea HOM05D004281 ORTHO05D004839 3.1e-16 89.4 91 46.2
BcaC05g25876 Brassica carinata HOM05D004281 ORTHO05D004839 1.5e-15 87.0 70 60.0
Cc00_g15810 Coffea canephora HOM05D004281 ORTHO05D004839 1.4e-13 80.5 52 73.1
Cc00_g25460 Coffea canephora HOM05D004281 ORTHO05D004839 2.5e-13 79.7 42 88.1
Cc05_g00900 Coffea canephora HOM05D004281 ORTHO05D004839 3.2e-13 79.3 42 85.7
Lsat_1_v5_gn_8_13760 Lactuca sativa HOM05D004281 ORTHO05D004839 9.4e-13 77.8 125 44.0
Actinidia34560 Actinidia chinensis HOM05D028692 ORTHO05D015213 1.8e-11 73.6 43 83.7
QL08p018107 Quercus lobata HOM05D004281 ORTHO05D004839 2.6e-10 69.7 35 91.4
Cc00_g15820 Coffea canephora HOM05D004281 ORTHO05D004839 7.7e-07 58.2 46 63.0
Hma1.2p1_0872F.1_g231180 Hydrangea macrophylla HOM05D004281 ORTHO05D004839 6.5e-06 55.1 69 50.7


User provided reference genes

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