Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p060201 Quercus lobata HOM05D000316 ORTHO05D026368 1.2e-59 233.0 119 100.0
QL02p027263 Quercus lobata HOM05D000316 ORTHO05D000374 5.5e-33 144.4 110 73.6
CiPaw.11G109700 Carya illinoinensis HOM05D000316 ORTHO05D000374 1.9e-25 119.4 96 66.7
Cfa011895 Carpinus fangiana HOM05D000316 ORTHO05D000374 3.0e-23 112.1 110 60.0
Potri.001G450200 Populus trichocarpa HOM05D000316 ORTHO05D000374 8.7e-23 110.5 111 56.8
COL.COLO4_10833 Corchorus olitorius HOM05D000316 ORTHO05D000374 2.5e-22 109.0 110 57.3
Duzib084G1321 Durio zibethinus HOM05D000316 ORTHO05D000374 2.5e-22 109.0 110 57.3
TAR629G2203 Trochodendron aralioides HOM05D000316 ORTHO05D000374 7.4e-22 107.5 110 55.5
RcHm_v2.0_Chr7g0187611 Rosa chinensis HOM05D000316 ORTHO05D000374 1.3e-21 106.7 110 54.5
Haze_09204 Corylus avellana HOM05D000316 ORTHO05D000374 2.8e-21 105.5 110 57.3
CiPaw.12G075600 Carya illinoinensis HOM05D000316 ORTHO05D000374 3.7e-21 105.1 110 56.4
Sabra16G0304100 Salix brachista HOM05D000316 ORTHO05D000374 3.7e-21 105.1 96 60.4
GSVIVG01019685001 Vitis vinifera HOM05D000316 ORTHO05D000374 8.2e-21 104.0 111 56.8
MD06G1122400 Malus domestica HOM05D000316 ORTHO05D000374 1.8e-20 102.8 110 50.9
Nn3g18798 Nelumbo nucifera HOM05D000316 ORTHO05D000374 1.8e-20 102.8 107 56.1
Duzib205G0988 Durio zibethinus HOM05D000316 ORTHO05D000374 2.4e-20 102.4 114 54.4
Prupe.5G133400 Prunus persica HOM05D000316 ORTHO05D000374 3.1e-20 102.1 110 52.7
CANSAT21G1953 Cannabis sativa HOM05D000316 ORTHO05D000374 5.3e-20 101.3 111 55.9
Dinv18763 Davidia involucrata HOM05D000316 ORTHO05D000374 5.3e-20 101.3 110 54.5
Thecc.03G217300 Theobroma cacao HOM05D000316 ORTHO05D000374 5.3e-20 101.3 110 56.4
TAR375G0549 Trochodendron aralioides HOM05D000316 ORTHO05D000374 6.9e-20 100.9 110 56.4
Manes.02G000800 Manihot esculenta HOM05D000316 ORTHO05D000374 1.5e-19 99.8 110 53.6
MBI12_g09295_MAGBIO Magnolia biondii HOM05D000316 ORTHO05D000374 2.6e-19 99.0 109 52.3
Manes.01G054800 Manihot esculenta HOM05D000316 ORTHO05D000374 2.6e-19 99.0 109 54.1
Ciclev10020627m.g Citrus clementina HOM05D000316 ORTHO05D000374 3.4e-19 98.6 95 61.1
FvH4_5g10510 Fragaria vesca HOM05D000316 ORTHO05D000374 1.0e-18 97.1 110 50.9
MD00G1034600 Malus domestica HOM05D000316 ORTHO05D000374 1.0e-18 97.1 110 46.4
Potri.011G151400 Populus trichocarpa HOM05D000316 ORTHO05D000374 1.3e-18 96.7 110 49.1
MELO3C005799.2 Cucumis melo HOM05D000316 ORTHO05D000374 3.8e-18 95.1 110 50.9
Hma1.2p1_0436F.1_g152850 Hydrangea macrophylla HOM05D000316 ORTHO05D000374 3.8e-18 95.1 102 55.9
CsaV3_5G001510 Cucumis sativus L. HOM05D000316 ORTHO05D000374 5.0e-18 94.7 110 51.8
Duzib068G1133 Durio zibethinus HOM05D000316 ORTHO05D000374 6.5e-18 94.4 110 52.7
TWI81G0729 Tripterygium wilfordii HOM05D000316 ORTHO05D000374 8.5e-18 94.0 110 52.7
FAN04G2207 Fragaria x ananassa HOM05D000316 ORTHO05D000374 1.9e-17 92.8 110 50.9
Sabra11G0135900 Salix brachista HOM05D000316 ORTHO05D000374 2.5e-17 92.4 103 51.5
Sabra11G0149200 Salix brachista HOM05D000316 ORTHO05D000374 2.5e-17 92.4 103 51.5
FAN13G2382 Fragaria x ananassa HOM05D000316 ORTHO05D000374 3.2e-17 92.0 125 46.4
Gorai.006G204700 Gossypium raimondii HOM05D000316 ORTHO05D000374 3.2e-17 92.0 110 51.8
ATR1155G050 Amborella trichopoda HOM05D000316 ORTHO05D000374 4.2e-17 91.7 95 54.7
ClCG01G001380 Citrullus lanatus HOM05D000316 ORTHO05D000374 5.5e-17 91.3 100 53.0
FAN08G0402 Fragaria x ananassa HOM05D000316 ORTHO05D000374 5.5e-17 91.3 123 45.5
FAN18G2945 Fragaria x ananassa HOM05D000316 ORTHO05D000374 5.5e-17 91.3 123 45.5
Gorai.008G260300 Gossypium raimondii HOM05D000316 ORTHO05D000374 5.5e-17 91.3 110 50.0
Eucgr.D01657 Eucalyptus grandis HOM05D000316 ORTHO05D000374 7.2e-17 90.9 110 51.8
PSO063G4625 Papaver somniferum HOM05D000316 ORTHO05D000374 7.2e-17 90.9 110 45.5
Gohir.A12G241900 Gossypium hirsutum HOM05D000316 ORTHO05D000374 9.4e-17 90.5 110 50.0
Sed0016310 Sechium edule HOM05D000316 ORTHO05D000374 9.4e-17 90.5 110 51.8
Gohir.D12G243100 Gossypium hirsutum HOM05D000316 ORTHO05D000374 2.1e-16 89.4 110 50.0
PSO782G3041 Papaver somniferum HOM05D000316 ORTHO05D000374 2.1e-16 89.4 110 46.4
Cpa.g.sc37.101 Carica papaya HOM05D000316 ORTHO05D000374 6.1e-16 87.8 87 57.5
Aqoxy5G04335 Aquilegia oxysepala HOM05D000316 ORTHO05D000374 1.0e-15 87.0 110 45.5
Atru.chr9.1847 Acer truncatum HOM05D000316 ORTHO05D000374 1.4e-15 86.7 62 74.2
Sed0003194 Sechium edule HOM05D000316 ORTHO05D000374 1.5e-14 83.2 111 45.9
Actinidia22222 Actinidia chinensis HOM05D000316 ORTHO05D026368 3.3e-14 82.0 87 56.3
Sc01g0010870 Simmondsia chinensis HOM05D000316 ORTHO05D000374 2.4e-12 75.9 62 64.5
SEGI_07044 Sequoiadendron giganteum HOM05D000316 ORTHO05D000374 2.0e-11 72.8 110 41.8
Rhsim02G0254000 Rhododendron simsii HOM05D000316 ORTHO05D000374 2.6e-11 72.4 104 43.3
vmacro11484 Vaccinium macrocarpon HOM05D000316 ORTHO05D000374 2.6e-11 72.4 61 63.9
THA.LOC104815400 Tarenaya hassleriana HOM05D000316 ORTHO05D000374 4.5e-11 71.6 111 41.4
Oeu042860.1 Olea europaea HOM05D000316 ORTHO05D000374 7.7e-11 70.9 104 46.2
Nitab4.5_0003419g0050 Nicotiana tabacum HOM05D000316 ORTHO05D000374 3.8e-10 68.6 97 47.4
Carub.0001s3125 Capsella rubella HOM05D000316 ORTHO05D000374 8.5e-10 67.4 107 36.4
SEGI_21361 Sequoiadendron giganteum HOM05D000316 ORTHO05D012803 8.5e-10 67.4 96 42.7
SGA_v2.0_scaffold104G30225 Striga asiatica HOM05D000316 ORTHO05D000374 8.5e-10 67.4 104 41.3
Sp1g28070 Schrenkiella parvula HOM05D000316 ORTHO05D000374 1.4e-09 66.6 110 41.8
SEGI_15770 Sequoiadendron giganteum HOM05D000316 ORTHO05D012803 1.9e-09 66.2 85 47.1
AL1G47220 Arabidopsis lyrata HOM05D000316 ORTHO05D000374 4.2e-09 65.1 56 60.7
AT1G32930 Arabidopsis thaliana HOM05D000316 ORTHO05D000374 1.2e-08 63.5 84 47.6
CAN.G567.109 Capsicum annuum HOM05D000316 ORTHO05D000374 2.7e-08 62.4 95 42.1
CARHR032260 Cardamine hirsuta HOM05D000316 ORTHO05D000374 3.6e-08 62.0 102 40.2
Thhalv10007803m.g Eutrema salsugineum HOM05D000316 ORTHO05D000374 3.6e-08 62.0 50 64.0
Aa31LG6G7530 Aethionema arabicum HOM05D000316 ORTHO05D000374 7.9e-08 60.8 55 56.4
Aqoxy5G02469 Aquilegia oxysepala HOM05D000316 ORTHO05D000374 7.9e-08 60.8 103 35.9
BcaC05g27317 Brassica carinata HOM05D000316 ORTHO05D000374 7.9e-08 60.8 57 59.6
Thecc.07G034600 Theobroma cacao HOM05D000316 ORTHO05D000374 1.4e-07 60.1 99 42.4
Sed0025273 Sechium edule HOM05D000316 ORTHO05D000374 3.0e-07 58.9 87 39.1
Aa31LG6G7110 Aethionema arabicum HOM05D000316 ORTHO05D026368 5.1e-07 58.2 52 57.7
C05p32390 Brassica napus HOM05D000316 ORTHO05D000374 5.1e-07 58.2 54 61.1
BolC5t31970H Brassica oleracea HOM05D000316 ORTHO05D000374 5.1e-07 58.2 54 61.1
Gorai.009G440200 Gossypium raimondii HOM05D000316 ORTHO05D000374 5.1e-07 58.2 99 40.4
PGR031G2699 Punica granatum HOM05D000316 ORTHO05D000374 5.1e-07 58.2 86 44.2
HanXRQChr16g0506451 Helianthus annuus HOM05D000316 ORTHO05D000374 8.8e-07 57.4 112 37.5
Gohir.D05G372000 Gossypium hirsutum HOM05D000316 ORTHO05D000374 1.1e-06 57.0 99 39.4
TAR629G3236 Trochodendron aralioides HOM05D000316 ORTHO05D000374 1.1e-06 57.0 87 41.4
ClCG10G005320 Citrullus lanatus HOM05D000316 ORTHO05D000374 1.5e-06 56.6 87 37.9
COL.COLO4_09667 Corchorus olitorius HOM05D000316 ORTHO05D000374 1.5e-06 56.6 98 39.8
CsaV3_3G005030 Cucumis sativus L. HOM05D000316 ORTHO05D000374 1.5e-06 56.6 87 39.1
QL07p008228 Quercus lobata HOM05D000316 ORTHO05D000374 1.5e-06 56.6 86 43.0
A09p33460 Brassica napus HOM05D000316 ORTHO05D000374 2.0e-06 56.2 54 59.3
BraA09t38888Z Brassica rapa HOM05D000316 ORTHO05D000374 2.0e-06 56.2 54 59.3
MELO3C025365.2 Cucumis melo HOM05D000316 ORTHO05D000374 2.0e-06 56.2 87 39.1
Gohir.A04G014300 Gossypium hirsutum HOM05D000316 ORTHO05D000374 2.6e-06 55.8 99 39.4
HanXRQChr03g0085911 Helianthus annuus HOM05D000316 ORTHO05D000374 2.6e-06 55.8 62 53.2
GSVIVG01037664001 Vitis vinifera HOM05D000316 ORTHO05D000374 2.6e-06 55.8 85 41.2
ATR0794G045 Amborella trichopoda HOM05D000316 ORTHO05D000374 3.3e-06 55.5 102 38.2
Duzib268G0619 Durio zibethinus HOM05D000316 ORTHO05D000374 3.3e-06 55.5 101 36.6
Manes.03G130500 Manihot esculenta HOM05D000316 ORTHO05D000374 3.3e-06 55.5 88 39.8
ATR0171G043 Amborella trichopoda HOM05D000316 ORTHO05D000374 4.4e-06 55.1 108 34.3
ECA240G1968 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 55.1 90 41.1
Mapoly0049s0111 Marchantia polymorpha HOM05D000316 ORTHO05D000374 4.4e-06 55.1 44 65.9
PGR031G0011 Punica granatum HOM05D000316 ORTHO05D000374 5.7e-06 54.7 96 42.7
Lsat_1_v5_gn_6_83020 Lactuca sativa HOM05D000316 ORTHO05D000374 9.7e-06 53.9 34 82.4


User provided reference genes

Program Settings