Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 1.3e-35 152.5 76 100.0
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 1.3e-35 152.5 76 100.0
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 6.8e-29 130.2 65 96.9
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 8.9e-29 129.8 65 96.9
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 8.9e-29 129.8 65 96.9
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 2.6e-28 128.3 69 88.4
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 5.8e-28 127.1 65 93.8
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 2.9e-27 124.8 65 96.9
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 6.4e-27 123.6 65 95.4
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 6.4e-27 123.6 70 90.0
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 6.4e-27 123.6 65 90.8
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 8.3e-27 123.2 65 93.8
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 8.3e-27 123.2 65 93.8
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 8.3e-27 123.2 65 93.8
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.9e-26 122.1 65 93.8
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.9e-26 122.1 65 93.8
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 1.9e-26 122.1 65 93.8
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 2.4e-26 121.7 65 93.8
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 2.4e-26 121.7 65 92.3
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 3.2e-26 121.3 65 93.8
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 4.1e-26 120.9 65 90.8
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 5.4e-26 120.6 65 90.8
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 5.4e-26 120.6 65 92.3
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 5.4e-26 120.6 65 92.3
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 5.4e-26 120.6 65 92.3
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 5.4e-26 120.6 65 92.3
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 7.0e-26 120.2 65 90.8
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 7.0e-26 120.2 65 90.8
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 7.0e-26 120.2 65 92.3
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 9.2e-26 119.8 65 89.2
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 9.2e-26 119.8 65 89.2
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 9.2e-26 119.8 65 89.2
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 9.2e-26 119.8 65 90.8
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 9.2e-26 119.8 65 90.8
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 1.6e-25 119.0 65 87.7
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 1.6e-25 119.0 65 92.3
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 2.0e-25 118.6 65 87.7
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 2.0e-25 118.6 65 89.2
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 2.0e-25 118.6 65 89.2
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 2.0e-25 118.6 65 87.7
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 2.0e-25 118.6 65 87.7
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 2.7e-25 118.2 65 87.7
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 2.7e-25 118.2 65 89.2
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 3.5e-25 117.9 65 89.2
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 3.5e-25 117.9 65 87.7
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 3.5e-25 117.9 65 90.8
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 3.5e-25 117.9 65 87.7
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 4.6e-25 117.5 65 86.2
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 4.6e-25 117.5 65 87.7
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 4.6e-25 117.5 65 87.7
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 6.0e-25 117.1 65 86.2
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 6.0e-25 117.1 65 86.2
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 6.0e-25 117.1 65 86.2
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 6.0e-25 117.1 65 89.2
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 7.8e-25 116.7 65 86.2
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 7.8e-25 116.7 65 86.2
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 7.8e-25 116.7 65 86.2
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 7.8e-25 116.7 65 86.2
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 7.8e-25 116.7 65 87.7
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.0e-24 116.3 65 86.2
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 1.3e-24 115.9 65 86.2
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.7e-24 115.5 65 87.7
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.7e-24 115.5 65 87.7
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 1.7e-24 115.5 65 87.7
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.7e-24 115.5 65 87.7
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.7e-24 115.5 65 86.2
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.3e-24 115.2 65 86.2
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.3e-24 115.2 65 86.2
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 2.3e-24 115.2 66 87.9
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 2.3e-24 115.2 66 87.9
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 3.9e-24 114.4 65 86.2
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 3.9e-24 114.4 65 84.6
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 3.9e-24 114.4 65 87.7
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.9e-24 114.4 65 84.6
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 86.2
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 86.2
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 86.2
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 86.2
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 81.5
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 81.5
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 5.0e-24 114.0 66 84.8
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 5.0e-24 114.0 66 84.8
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 86.2
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 5.0e-24 114.0 65 84.6
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 6.6e-24 113.6 65 84.6
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 6.6e-24 113.6 65 87.7
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 8.6e-24 113.2 65 81.5
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 8.6e-24 113.2 65 83.1
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.1e-23 112.8 65 83.1
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.1e-23 112.8 65 84.6
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 1.1e-23 112.8 65 86.2
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 1.5e-23 112.5 65 84.6
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.5e-23 112.5 65 84.6
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.5e-23 112.5 65 83.1
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 1.5e-23 112.5 66 83.3
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 1.9e-23 112.1 74 77.0
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 1.9e-23 112.1 65 83.1
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.5e-23 111.7 65 84.6
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.5e-23 111.7 65 83.1
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.5e-23 111.7 65 83.1
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.5e-23 111.7 65 84.6
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 3.3e-23 111.3 65 80.0
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 4.3e-23 110.9 65 83.1
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.3e-23 110.9 65 83.1
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.3e-23 110.9 65 83.1
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 5.6e-23 110.5 65 81.5
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 5.6e-23 110.5 65 87.7
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 1.6e-22 109.0 65 80.0
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 1.6e-22 109.0 66 84.8
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.6e-22 109.0 66 84.8
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 2.1e-22 108.6 65 81.5
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.1e-22 108.6 65 80.0
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 3.6e-22 107.8 67 80.6
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 3.6e-22 107.8 67 80.6
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 3.6e-22 107.8 67 80.6
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 3.6e-22 107.8 67 80.6
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 3.6e-22 107.8 67 80.6
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 3.6e-22 107.8 67 80.6
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 4.0e-21 104.4 67 76.1
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 5.2e-21 104.0 87 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 2.0e-20 102.1 67 73.1
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 2.6e-20 101.7 68 77.9
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 3.4e-20 101.3 68 75.0
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 1.1e-18 96.3 141 45.4
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 1.4e-18 95.9 66 71.2
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.9e-18 95.5 56 80.4
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 2.1e-17 92.0 99 53.5
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 1.7e-16 89.0 65 69.2
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 8.9e-13 76.6 36 97.2
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 2.6e-12 75.1 34 100.0
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 2.6e-12 75.1 37 89.2
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 9.9e-12 73.2 34 97.1
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 6.4e-11 70.5 34 88.2
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.4e-10 69.3 74 52.7
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 3.2e-10 68.2 34 82.4
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 4.1e-10 67.8 34 85.3
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 1.2e-09 66.2 39 71.8
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 6.0e-09 63.9 37 78.4
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 2.3e-08 62.0 71 50.7
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 1.9e-07 58.9 33 84.8
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 7.3e-07 57.0 26 96.2
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 1.2e-06 56.2 45 60.0
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 2.8e-06 55.1 30 76.7
A09p52080 Brassica napus HOM05D004131 ORTHO05D004778 3.6e-06 54.7 32 81.2
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 4.7e-06 54.3 44 59.1
Cpa.g.c34531 Carica papaya HOM05D004131 ORTHO05D004778 6.2e-06 53.9 29 86.2


User provided reference genes

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