Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 9.6e-178 626.7 314 100.0
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 7.6e-167 590.5 372 83.1
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 1.8e-155 552.7 313 87.9
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 9.3e-149 530.4 313 84.7
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 1.5e-146 523.1 313 82.7
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 4.3e-146 521.5 313 81.5
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 4.3e-146 521.5 313 81.5
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 5.7e-146 521.2 313 83.1
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 4.8e-145 518.1 313 82.1
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.1e-144 516.9 313 80.5
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 5.3e-144 514.6 313 80.8
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 6.9e-144 514.2 313 81.2
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 9.0e-144 513.8 313 81.8
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 1.2e-143 513.5 313 81.2
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 1.5e-143 513.1 313 81.8
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 3.4e-143 511.9 313 80.8
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 5.9e-143 511.1 313 80.2
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 1.3e-142 510.0 313 79.6
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 1.3e-142 510.0 313 81.2
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 2.2e-142 509.2 313 80.8
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 6.5e-142 507.7 326 79.4
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 6.5e-142 507.7 315 81.0
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 8.5e-142 507.3 314 80.3
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 1.1e-141 506.9 318 80.2
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 1.1e-141 506.9 314 81.2
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 1.9e-141 506.1 305 82.0
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 4.2e-141 505.0 314 80.3
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 7.2e-141 504.2 305 82.3
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 4.6e-140 501.5 315 79.7
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 6.1e-140 501.1 318 79.2
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 7.9e-140 500.7 313 78.6
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.8e-139 499.6 333 75.4
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 2.3e-139 499.2 315 78.4
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 2.0e-138 496.1 305 81.0
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 5.7e-138 494.6 313 79.9
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 9.7e-138 493.8 315 78.1
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 4.1e-136 488.4 314 79.3
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 5.3e-136 488.0 315 78.1
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 9.1e-136 487.3 299 81.3
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 9.1e-136 487.3 316 78.5
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 9.1e-136 487.3 325 74.8
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 1.2e-135 486.9 316 78.5
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 2.0e-135 486.1 308 76.6
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 2.0e-135 486.1 305 78.0
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 2.6e-135 485.7 313 77.6
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 3.4e-135 485.3 313 77.6
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 3.4e-135 485.3 316 77.5
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 7.7e-135 484.2 315 76.8
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 7.7e-135 484.2 299 80.9
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 1.7e-134 483.0 283 84.1
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 3.8e-134 481.9 316 77.2
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 3.8e-134 481.9 318 76.4
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 6.5e-134 481.1 313 76.7
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 6.5e-134 481.1 348 71.6
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 8.5e-134 480.7 315 76.2
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 1.1e-133 480.3 313 77.3
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.4e-133 479.9 298 77.5
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 3.2e-133 478.8 298 77.5
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 3.2e-133 478.8 299 79.6
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 4.2e-133 478.4 313 76.0
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 4.2e-133 478.4 316 75.9
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 9.4e-133 477.2 299 79.3
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 1.2e-132 476.9 318 75.5
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 3.6e-132 475.3 319 74.9
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 4.7e-132 474.9 300 78.0
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 7.9e-132 474.2 282 83.3
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 1.0e-131 473.8 299 79.6
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 1.0e-131 473.8 309 74.4
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.8e-131 473.0 315 76.5
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 2.3e-131 472.6 323 74.6
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 8.8e-131 470.7 314 74.8
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 3.3e-130 468.8 366 68.0
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 1.3e-129 466.8 313 75.7
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 1.7e-129 466.5 309 77.3
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 4.8e-129 464.9 313 71.9
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 6.3e-129 464.5 336 70.8
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 1.4e-128 463.4 299 77.6
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 1.8e-128 463.0 282 81.2
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 3.1e-128 462.2 301 74.1
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 2.9e-126 455.7 317 72.9
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 2.5e-125 452.6 299 73.2
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 1.4e-123 446.8 301 72.1
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 1.4e-123 446.8 297 77.4
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 2.3e-123 446.0 292 76.7
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 2.0e-122 443.0 301 71.1
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 1.3e-121 440.3 300 71.7
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 2.8e-121 439.1 300 71.7
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 2.8e-121 439.1 313 68.7
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 7.0e-120 434.5 301 70.1
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 9.1e-120 434.1 301 71.1
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 9.1e-120 434.1 301 71.1
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 9.1e-120 434.1 344 65.4
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 1.2e-119 433.7 285 77.2
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 2.0e-119 433.0 301 71.1
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 2.6e-119 432.6 299 70.6
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 3.5e-119 432.2 302 69.9
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 4.5e-119 431.8 311 68.5
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 1.0e-118 430.6 299 70.2
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.3e-118 430.3 301 70.4
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 1.3e-118 430.3 301 70.4
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 2.9e-118 429.1 309 65.0
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 3.8e-118 428.7 302 69.2
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 4.0e-115 418.7 249 84.7
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 4.8e-113 411.8 301 68.4
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 6.3e-113 411.4 313 68.7
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 6.5e-110 401.4 249 79.5
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 1.4e-107 393.7 249 79.5
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 4.0e-107 392.1 250 77.6
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 1.2e-106 390.6 316 65.5
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 4.4e-106 388.7 344 61.9
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 3.5e-103 379.0 314 65.3
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 5.9e-103 378.3 293 68.6
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 2.2e-97 359.8 299 59.5
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.0e-94 350.9 254 71.7
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 7.3e-93 344.7 227 74.4
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 6.6e-86 321.6 235 72.3
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 3.1e-83 312.8 222 72.5
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 1.8e-75 287.0 208 71.6
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 9.9e-74 281.2 330 47.6
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 1.4e-72 277.3 190 74.7
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.6e-71 273.9 185 73.0
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 1.4e-59 234.2 321 44.2
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.3e-57 227.6 164 69.5
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 2.7e-55 219.9 299 45.2
Lj6A193T36 Lonicera japonica HOM05D005513 ORTHO05D006848 2.7e-55 219.9 178 68.5
CAN.G1703.16 Capsicum annuum HOM05D005513 ORTHO05D006848 3.0e-54 216.5 142 76.1
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 1.2e-50 204.5 316 39.2
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-47 193.7 170 61.2
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 3.0e-38 163.3 111 76.6
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 5.1e-38 162.5 116 69.8
Lj6A203T27 Lonicera japonica HOM05D005513 ORTHO05D006848 4.1e-35 152.9 100 75.0
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 3.9e-30 136.3 90 77.8
Lj6A203G20 Lonicera japonica HOM05D005513 ORTHO05D006848 3.8e-25 119.8 176 44.3
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 1.1e-24 118.2 78 78.2
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 3.2e-24 116.7 84 73.8
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 4.6e-23 112.8 69 78.3
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 2.2e-20 104.0 72 75.0
Lj6A230T44 Lonicera japonica HOM05D005513 ORTHO05D006848 1.0e-14 85.1 98 54.1
SHI25988 Sapria himalayana HOM05D000105 ORTHO05D000023 2.2e-12 77.4 83 48.2
Lj6A192T18 Lonicera japonica HOM05D005513 ORTHO05D006848 1.1e-11 75.1 56 66.1
SHI25987 Sapria himalayana HOM05D005513 ORTHO05D006848 4.2e-08 63.2 54 51.9


User provided reference genes

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