Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p056550 Quercus lobata HOM05D007605 ORTHO05D009572 2.1e-62 242.3 127 100.0
Sabra19G0108500 Salix brachista HOM05D000005 ORTHO05D000012 1.5e-17 93.2 110 51.8
Potri.019G096500 Populus trichocarpa HOM05D007605 ORTHO05D009572 5.9e-17 91.3 64 76.6
Potri.019G096700 Populus trichocarpa HOM05D007605 ORTHO05D009572 5.9e-17 91.3 64 76.6
Haze_00851 Corylus avellana HOM05D007605 ORTHO05D009572 1.7e-16 89.7 65 73.8
Cfa015674 Carpinus fangiana HOM05D007605 ORTHO05D009572 5.0e-16 88.2 65 72.3
MBI07_g11492_MAGBIO Magnolia biondii HOM05D007605 ORTHO05D009572 8.5e-16 87.4 51 86.3
Sabra13G0106700 Salix brachista HOM05D007605 ORTHO05D009572 1.1e-15 87.0 72 69.4
ECA248G2718 Erigeron canadensis HOM05D007605 ORTHO05D009572 2.5e-15 85.9 56 76.8
THA.LOC104802329 Tarenaya hassleriana HOM05D007605 ORTHO05D009572 2.5e-15 85.9 62 74.2
PGR142G0642 Punica granatum HOM05D007605 ORTHO05D009572 5.5e-15 84.7 64 70.3
Lsat_1_v5_gn_1_21060 Lactuca sativa HOM05D007605 ORTHO05D009572 9.4e-15 84.0 54 77.8
Rhsim09G0008600 Rhododendron simsii HOM05D007605 ORTHO05D009572 1.2e-14 83.6 52 80.8
CSS0028313 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 2.1e-14 82.8 65 69.2
Migut.N03059 Erythranthe guttata HOM05D007605 ORTHO05D009572 2.1e-14 82.8 52 78.8
Nn1g09550 Nelumbo nucifera HOM05D007605 ORTHO05D009572 2.1e-14 82.8 54 75.9
arahy.Tifrunner.gnm1.ann1.FBG7WK Arachis hypogaea HOM05D007605 ORTHO05D009572 3.6e-14 82.0 66 66.7
Eucgr.H04449 Eucalyptus grandis HOM05D007605 ORTHO05D009572 3.6e-14 82.0 60 75.0
AT2G43780 Arabidopsis thaliana HOM05D007605 ORTHO05D009572 4.6e-14 81.6 62 74.2
Cpa.g.sc9.378 Carica papaya HOM05D007605 ORTHO05D009572 4.6e-14 81.6 61 70.5
Ciclev10023247m.g Citrus clementina HOM05D007605 ORTHO05D009572 4.6e-14 81.6 57 71.9
Duzib212G0337 Durio zibethinus HOM05D007605 ORTHO05D009572 4.6e-14 81.6 61 72.1
TWI63G1406 Tripterygium wilfordii HOM05D007605 ORTHO05D009572 4.6e-14 81.6 55 78.2
CANSAT01G0287 Cannabis sativa HOM05D007605 ORTHO05D009572 6.1e-14 81.3 64 67.2
Os12g0611700 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 7.9e-14 80.9 57 71.9
Sc13g0006890 Simmondsia chinensis HOM05D007605 ORTHO05D009572 7.9e-14 80.9 57 77.2
ATR0743G065 Amborella trichopoda HOM05D007605 ORTHO05D009572 1.0e-13 80.5 61 65.6
Aqoxy4G02871 Aquilegia oxysepala HOM05D007605 ORTHO05D009572 1.0e-13 80.5 59 69.5
arahy.Tifrunner.gnm1.ann1.MPL0H7 Arachis hypogaea HOM05D007605 ORTHO05D009572 1.0e-13 80.5 65 66.2
MELO3C011854.2 Cucumis melo HOM05D007605 ORTHO05D009572 1.0e-13 80.5 59 69.5
Thecc.04G164300 Theobroma cacao HOM05D007605 ORTHO05D009572 1.0e-13 80.5 55 72.7
Carub.0004s2631 Capsella rubella HOM05D007605 ORTHO05D009572 1.4e-13 80.1 62 71.0
Atru.chr4.1455 Acer truncatum HOM05D007605 ORTHO05D009572 1.8e-13 79.7 54 74.1
CiPaw.01G168900 Carya illinoinensis HOM05D007605 ORTHO05D009572 1.8e-13 79.7 55 72.7
Lj6g0006319 Lotus japonicus HOM05D007605 ORTHO05D009572 1.8e-13 79.7 63 69.8
Lj6g0016727 Lotus japonicus HOM05D007605 ORTHO05D009572 1.8e-13 79.7 63 69.8
Os05g0103800 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 1.8e-13 79.7 57 70.2
SGA_v2.0_scaffold25G11005 Striga asiatica HOM05D000384 ORTHO05D009572 1.8e-13 79.7 55 70.9
AL4G42650 Arabidopsis lyrata HOM05D007605 ORTHO05D009572 2.3e-13 79.3 62 71.0
AUR62002411 Chenopodium quinoa HOM05D007605 ORTHO05D009572 3.0e-13 79.0 53 71.7
FAN05G3507 Fragaria x ananassa HOM05D007605 ORTHO05D009572 3.0e-13 79.0 63 68.3
Glyma.18G297600 Glycine max HOM05D007605 ORTHO05D009572 3.0e-13 79.0 65 66.2
Phvul.008G005000 Phaseolus vulgaris HOM05D007605 ORTHO05D009572 3.0e-13 79.0 65 67.7
Sopen06g018580 Solanum pennellii HOM05D007605 ORTHO05D009572 3.0e-13 79.0 52 73.1
EL10Ac3g06103 Beta vulgaris HOM05D007605 ORTHO05D009572 3.9e-13 78.6 62 67.7
CSS0027032 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 3.9e-13 78.6 58 74.1
COL.COLO4_38114 Corchorus olitorius HOM05D007605 ORTHO05D009572 3.9e-13 78.6 54 72.2
Glyma.08G364500 Glycine max HOM05D007605 ORTHO05D009572 3.9e-13 78.6 65 64.6
PGSC0003DMG400016297 Solanum tuberosum HOM05D007605 ORTHO05D009572 3.9e-13 78.6 50 76.0
Sed0018718 Sechium edule HOM05D007605 ORTHO05D009572 5.1e-13 78.2 52 75.0
Ah.07g202920 Amaranthus hybridus HOM05D007605 ORTHO05D009572 6.7e-13 77.8 52 73.1
FAN05G0946 Fragaria x ananassa HOM05D007605 ORTHO05D009572 6.7e-13 77.8 63 66.7
Lj1g0002800 Lotus japonicus HOM05D007605 ORTHO05D009572 6.7e-13 77.8 63 68.3
Lj1g0021920 Lotus japonicus HOM05D007605 ORTHO05D009572 6.7e-13 77.8 63 68.3
VMungo1383G0010 Vigna mungo HOM05D003647 ORTHO05D004182 6.7e-13 77.8 64 65.6
DCAR_030842 Daucus carota HOM05D007605 ORTHO05D009572 8.8e-13 77.4 62 67.7
FAN14G0446 Fragaria x ananassa HOM05D007605 ORTHO05D009572 8.8e-13 77.4 63 66.7
MD03G1210800 Malus domestica HOM05D007605 ORTHO05D009572 1.1e-12 77.0 54 70.4
Manes.05G136900 Manihot esculenta HOM05D007605 ORTHO05D009572 1.1e-12 77.0 52 76.9
Manes.08G010900 Manihot esculenta HOM05D007605 ORTHO05D009572 1.1e-12 77.0 52 76.9
CARHR138960 Cardamine hirsuta HOM05D007605 ORTHO05D009572 1.5e-12 76.6 62 69.4
Medtr7g091060 Medicago truncatula HOM05D007605 ORTHO05D009572 1.5e-12 76.6 62 66.1
Ca_14651_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 1.9e-12 76.3 63 65.1
Gohir.A10G144600 Gossypium hirsutum HOM05D007605 ORTHO05D009572 1.9e-12 76.3 58 70.7
RcHm_v2.0_Chr4g0405791 Rosa chinensis HOM05D007605 ORTHO05D009572 1.9e-12 76.3 65 63.1
RcHm_v2.0_Chr7g0232231 Rosa chinensis HOM05D007605 ORTHO05D009572 1.9e-12 76.3 65 64.6
FvH4_6g21131 Fragaria vesca HOM05D007605 ORTHO05D009572 2.5e-12 75.9 62 66.1
Nitab4.5_0004700g0030 Nicotiana tabacum HOM05D001130 ORTHO05D001052 2.5e-12 75.9 74 58.1
Nitab4.5_0007474g0060 Nicotiana tabacum HOM05D007605 ORTHO05D009572 2.5e-12 75.9 72 59.7
Sp4g25850 Schrenkiella parvula HOM05D007605 ORTHO05D009572 2.5e-12 75.9 61 67.2
MD11G1225700 Malus domestica HOM05D007605 ORTHO05D009572 3.3e-12 75.5 52 71.2
TPR.G18242 Trifolium pratense HOM05D007605 ORTHO05D009572 3.3e-12 75.5 69 63.8
Aa31LG1G25490 Aethionema arabicum HOM05D005323 ORTHO05D006820 4.3e-12 75.1 60 66.7
Ca_08431_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 4.3e-12 75.1 63 63.5
Peaxi162Scf00579g00018 Petunia axillaris HOM05D007605 ORTHO05D009572 5.7e-12 74.7 52 69.2
SalBow6G4154 Salvia bowleyana HOM05D007605 ORTHO05D009572 5.7e-12 74.7 55 65.5
Prupe.4G204500 Prunus persica HOM05D007605 ORTHO05D009572 7.4e-12 74.3 54 66.7
Gohir.D10G122400 Gossypium hirsutum HOM05D007605 ORTHO05D009572 9.7e-12 73.9 54 70.4
Gorai.011G134700 Gossypium raimondii HOM05D007605 ORTHO05D009572 9.7e-12 73.9 54 70.4
Thhalv10001711m.g Eutrema salsugineum HOM05D007605 ORTHO05D009572 1.3e-11 73.6 67 65.7
Atru.chr12.2308 Acer truncatum HOM05D007605 ORTHO05D009572 2.2e-11 72.8 54 68.5
Glyma.19G073500 Glycine max HOM05D007605 ORTHO05D009572 2.2e-11 72.8 56 66.1
Lalb_Chr04g0257371 Lupinus albus HOM05D007605 ORTHO05D009572 2.2e-11 72.8 52 71.2
Psat3g074320 Pisum sativum HOM05D007605 ORTHO05D009572 2.2e-11 72.8 63 63.5
BcaB01g03362 Brassica carinata HOM05D007605 ORTHO05D009572 2.8e-11 72.4 62 62.9
BcaB05g23281 Brassica carinata HOM05D007605 ORTHO05D009572 2.8e-11 72.4 62 62.9
PSO573G0041 Papaver somniferum HOM05D007605 ORTHO05D009572 2.8e-11 72.4 52 69.2
BcaC01g05214 Brassica carinata HOM05D007605 ORTHO05D009572 3.7e-11 72.0 50 72.0
BcaC02g12364 Brassica carinata HOM05D005323 ORTHO05D006820 3.7e-11 72.0 50 72.0
C03p29150 Brassica napus HOM05D007605 ORTHO05D009572 3.7e-11 72.0 50 72.0
C04p04730 Brassica napus HOM05D005323 ORTHO05D006820 3.7e-11 72.0 50 72.0
BolC3t15267H Brassica oleracea HOM05D007605 ORTHO05D009572 3.7e-11 72.0 50 72.0
BolC4t22103H Brassica oleracea HOM05D005323 ORTHO05D006820 3.7e-11 72.0 50 72.0
Lsat_1_v5_gn_1_74540 Lactuca sativa HOM05D007605 ORTHO05D009572 3.7e-11 72.0 50 70.0
BcaB02g08902 Brassica carinata HOM05D005323 ORTHO05D006820 6.3e-11 71.2 50 72.0
A03p24460 Brassica napus HOM05D007605 ORTHO05D009572 6.3e-11 71.2 50 72.0
BraA03t11655Z Brassica rapa HOM05D007605 ORTHO05D009572 6.3e-11 71.2 50 72.0
A05p03980 Brassica napus HOM05D005323 ORTHO05D006820 1.1e-10 70.5 50 70.0
BraA05t19386Z Brassica rapa HOM05D005323 ORTHO05D006820 1.1e-10 70.5 50 70.0
ClCG11G013540 Citrullus lanatus HOM05D007605 ORTHO05D009572 2.4e-10 69.3 47 74.5
GSVIVG01038176001 Vitis vinifera HOM05D007605 ORTHO05D009572 6.9e-10 67.8 53 66.0
CsaV3_5G030160 Cucumis sativus L. HOM05D007605 ORTHO05D009572 1.5e-09 66.6 48 70.8
Lj6C218G0 Lonicera japonica HOM05D000384 ORTHO05D000468 1.5e-09 66.6 42 76.2
Glyma.19G030600 Glycine max HOM05D007605 ORTHO05D009572 2.0e-09 66.2 66 57.6
vmacro23387 Vaccinium macrocarpon HOM05D007605 ORTHO05D009572 8.5e-08 60.8 37 81.1
Pp3c9_12740 Physcomitrium patens HOM05D007605 ORTHO05D009572 1.6e-06 56.6 45 60.0
Glyma.17G205632 Glycine max HOM05D007605 ORTHO05D009572 3.6e-06 55.5 56 53.6


User provided reference genes

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