Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-33 145.2 73 100.0
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-24 115.5 73 84.9
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 5.5e-20 100.5 73 72.6
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 9.8e-17 89.7 72 68.1
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 9.8e-17 89.7 72 68.1
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.8e-16 88.2 72 65.3
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 6.3e-16 87.0 72 63.9
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-15 84.7 73 61.6
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 5.4e-15 84.0 72 63.9
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.2e-15 83.2 72 63.9
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-14 81.6 68 61.8
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.5e-14 81.3 72 62.5
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 4.6e-14 80.9 72 62.5
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 5.9e-14 80.5 72 61.1
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 5.9e-14 80.5 72 62.5
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-13 79.7 72 61.1
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.0e-13 79.7 69 62.3
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.3e-13 79.3 72 61.1
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.3e-13 79.3 72 65.3
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-13 79.0 68 63.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-13 79.0 69 63.8
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-13 79.0 69 60.9
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-13 78.6 69 60.9
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.3e-13 78.6 72 59.7
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 2.3e-13 78.6 69 62.3
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 2.9e-13 78.2 72 56.9
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 3.9e-13 77.8 65 66.2
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-13 77.4 69 60.9
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-13 77.4 69 60.9
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 5.0e-13 77.4 72 58.3
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.6e-13 76.6 72 59.7
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-12 76.3 72 58.3
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.1e-12 76.3 68 60.3
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-12 75.9 72 58.3
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.5e-12 75.9 72 58.3
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.5e-12 75.9 72 58.3
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.5e-12 75.1 72 58.3
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.3e-12 74.7 71 57.7
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.3e-12 74.3 71 57.7
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.3e-12 74.3 72 56.9
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.3e-12 74.3 72 58.3
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 4.3e-12 74.3 76 61.8
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.6e-12 73.9 72 56.9
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 7.3e-12 73.6 60 65.0
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 7.3e-12 73.6 68 57.4
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.5e-12 73.2 73 58.9
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.5e-12 73.2 71 56.3
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-11 72.8 78 60.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.2e-11 72.8 72 59.7
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-11 72.4 70 57.1
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 1.6e-11 72.4 74 59.5
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 2.1e-11 72.0 72 52.8
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.1e-11 72.0 72 61.1
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 2.1e-11 72.0 76 60.5
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-11 71.6 76 60.5
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 3.6e-11 71.2 72 56.9
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 3.6e-11 71.2 77 55.8
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 3.6e-11 71.2 66 60.6
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 4.7e-11 70.9 72 59.7
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.0e-10 69.7 71 54.9
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-10 68.9 73 56.2
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-10 68.9 68 52.9
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.8e-10 68.9 68 52.9
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-10 68.6 70 55.7
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 2.3e-10 68.6 68 52.9
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.1e-10 68.2 75 58.7
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 3.1e-10 68.2 68 52.9
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.2e-10 67.4 70 55.7
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 5.2e-10 67.4 69 50.7
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-09 66.2 70 54.3
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 1.2e-09 66.2 69 49.3
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.2e-09 66.2 63 55.6
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.5e-09 65.9 69 52.2
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 2.0e-09 65.5 63 60.3
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.6e-09 65.1 72 56.9
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 2.6e-09 65.1 73 52.1
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 3.4e-09 64.7 68 50.0
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-09 64.3 69 55.1
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.4e-09 64.3 68 58.8
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 4.4e-09 64.3 68 50.0
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 4.4e-09 64.3 69 47.8
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 4.4e-09 64.3 67 47.8
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 4.4e-09 64.3 63 55.6
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 7.5e-09 63.5 73 52.1
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.5e-09 63.5 69 52.2
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 7.5e-09 63.5 69 47.8
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 9.8e-09 63.2 73 52.1
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 1.7e-08 62.4 69 55.1
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 2.2e-08 62.0 72 51.4
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 2.9e-08 61.6 79 53.2
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 6.4e-08 60.5 73 50.7
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 8.3e-08 60.1 68 48.5
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.1e-07 59.7 73 46.6
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 1.4e-07 59.3 73 46.6
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.9e-07 58.9 75 53.3
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.9e-07 58.9 73 49.3
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 3.2e-07 58.2 73 45.2
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.4e-07 57.4 73 53.4
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 5.4e-07 57.4 68 48.5
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.6e-06 55.8 66 48.5
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.6e-06 55.8 79 50.6
AUR62002340 Chenopodium quinoa HOM05D038336 ORTHO05D038978 2.0e-06 55.5 71 43.7
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.0e-06 55.5 69 47.8


User provided reference genes

Program Settings