Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 8.1e-35 149.8 74 100.0
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.5e-33 145.6 74 95.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-30 135.6 74 90.5
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.7e-29 132.1 74 87.8
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-18 96.3 62 75.8
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.6e-17 91.7 74 59.5
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 1.3e-16 89.4 70 61.4
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.9e-16 88.2 74 62.2
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.9e-16 88.2 74 62.2
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 2.9e-16 88.2 74 64.9
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 6.4e-16 87.0 74 63.5
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.4e-16 86.7 74 59.5
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 8.4e-16 86.7 74 62.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 2.4e-15 85.1 74 62.2
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.2e-15 84.7 74 60.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 3.2e-15 84.7 74 58.1
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-15 84.3 74 60.8
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.4e-15 84.0 76 60.5
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 5.4e-15 84.0 71 60.6
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.1e-15 83.6 74 59.5
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-14 82.8 74 55.4
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.6e-14 82.4 75 58.7
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 1.6e-14 82.4 65 63.1
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 6.0e-14 80.5 71 60.6
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 7.9e-14 80.1 77 53.2
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 7.9e-14 80.1 74 59.5
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.0e-13 79.7 65 55.4
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.0e-13 79.7 74 55.4
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.3e-13 79.3 57 66.7
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.3e-13 79.3 74 54.1
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.8e-13 79.0 77 57.1
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-13 79.0 75 57.3
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 2.3e-13 78.6 74 51.4
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 2.3e-13 78.6 74 52.7
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 2.3e-13 78.6 65 60.0
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-13 78.2 74 52.7
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 3.9e-13 77.8 74 55.4
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 3.9e-13 77.8 74 54.1
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 5.1e-13 77.4 74 59.5
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.7e-13 77.0 75 60.0
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.7e-13 77.0 75 60.0
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 6.7e-13 77.0 74 52.7
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 8.7e-13 76.6 74 52.7
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.1e-12 76.3 73 60.3
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.1e-12 76.3 68 55.9
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 1.1e-12 76.3 74 56.8
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.1e-12 76.3 81 49.4
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 1.1e-12 76.3 74 50.0
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.5e-12 75.9 73 58.9
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-12 75.5 76 56.6
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-12 75.5 80 52.5
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.9e-12 75.5 74 51.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.9e-12 75.5 74 52.7
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-12 75.5 71 59.2
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-12 75.1 73 57.5
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-12 75.1 75 58.7
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.5e-12 75.1 72 56.9
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.5e-12 75.1 75 54.7
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 2.5e-12 75.1 70 50.0
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.3e-12 74.3 76 55.3
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.6e-12 73.9 74 55.4
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.6e-12 73.9 74 54.1
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 5.6e-12 73.9 68 54.4
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 5.6e-12 73.9 63 52.4
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 9.6e-12 73.2 70 55.7
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 9.6e-12 73.2 75 57.3
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 1.3e-11 72.8 74 52.7
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 1.3e-11 72.8 70 48.6
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-11 72.4 73 58.9
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 2.8e-11 71.6 65 55.4
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.7e-11 71.2 70 57.1
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.8e-11 70.9 74 56.8
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 4.8e-11 70.9 68 52.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 6.2e-11 70.5 71 50.7
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 8.1e-11 70.1 65 55.4
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.4e-10 69.3 69 53.6
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.4e-10 69.3 75 52.0
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-10 69.3 65 52.3
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 3.1e-10 68.2 75 46.7
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 5.3e-10 67.4 74 44.6
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 5.3e-10 67.4 74 51.4
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 6.9e-10 67.0 69 52.2
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 6.9e-10 67.0 69 49.3
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.0e-10 66.6 77 53.2
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 9.0e-10 66.6 78 46.2
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 9.0e-10 66.6 75 48.0
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.2e-09 66.2 65 55.4
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 1.2e-09 66.2 74 44.6
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.2e-09 66.2 71 46.5
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 2.6e-09 65.1 71 47.9
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 3.4e-09 64.7 71 46.5
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-09 64.3 75 52.0
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-09 64.3 72 54.2
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-09 64.3 68 47.1
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 4.5e-09 64.3 71 47.9
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 4.5e-09 64.3 68 47.1
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-09 64.3 53 54.7
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 5.8e-09 63.9 69 47.8
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 7.6e-09 63.5 62 56.5
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 7.6e-09 63.5 81 53.1
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 7.6e-09 63.5 72 44.4
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 1.3e-08 62.8 76 50.0
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.3e-08 62.8 77 42.9
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.7e-08 62.4 68 47.1
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 1.7e-08 62.4 67 44.8
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.8e-08 61.2 70 48.6
ClCG07G015250 Citrullus lanatus HOM05D006282 ORTHO05D007460 4.9e-08 60.8 76 47.4
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 6.5e-08 60.5 66 43.9
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 8.4e-08 60.1 70 47.1
MELO3C032848.2 Cucumis melo HOM05D006282 ORTHO05D007460 1.4e-07 59.3 78 43.6
Sed0000720 Sechium edule HOM05D006282 ORTHO05D007460 1.4e-07 59.3 77 44.2
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 1.9e-07 58.9 80 50.0
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.9e-07 58.9 76 42.1
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 1.9e-07 58.9 72 44.4
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.5e-07 58.5 67 43.3
CsaV3_4G002840 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.2e-07 57.8 81 43.2
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 4.2e-07 57.8 70 44.3
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 4.2e-07 57.8 67 43.3
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 5.5e-07 57.4 66 43.9
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 5.5e-07 57.4 72 44.4
AUR62023815 Chenopodium quinoa HOM05D020500 ORTHO05D021210 7.1e-07 57.0 66 43.9
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 9.3e-07 56.6 66 50.0
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-06 56.2 64 43.8
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 1.2e-06 56.2 80 43.8
AUR62002617 Chenopodium quinoa HOM05D020500 ORTHO05D021210 1.6e-06 55.8 66 45.5
MELO3C027180.2 Cucumis melo HOM05D064062 ORTHO05D007460 6.0e-06 53.9 77 39.0
AUR62002372 Chenopodium quinoa HOM05D020500 ORTHO05D021210 7.9e-06 53.5 65 46.2


User provided reference genes

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