Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 2.7e-89 332.0 173 100.0
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 2.3e-64 249.2 177 72.9
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 5.1e-64 248.1 173 75.1
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 9.6e-63 243.8 173 74.0
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.1e-62 242.7 173 74.0
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 2.4e-61 239.2 173 72.3
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.3e-59 233.4 175 66.9
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 1.7e-59 233.0 173 71.1
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 3.9e-56 221.9 175 63.4
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 6.7e-56 221.1 173 64.2
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 8.7e-56 220.7 182 65.4
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 8.7e-56 220.7 173 66.5
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 8.7e-56 220.7 172 66.3
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 7.4e-55 217.6 167 67.1
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 3.7e-54 215.3 171 68.4
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.4e-53 213.4 174 64.4
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 3.1e-53 212.2 176 65.3
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 4.1e-53 211.8 172 66.3
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.2e-52 210.3 171 64.9
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.2e-52 210.3 175 61.1
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 1.5e-52 209.9 171 64.9
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.5e-52 209.9 171 64.9
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.5e-52 209.9 175 60.6
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.6e-52 209.1 174 63.2
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 3.4e-52 208.8 172 64.0
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 4.5e-52 208.4 173 64.2
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 5.8e-52 208.0 174 60.9
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 7.6e-52 207.6 176 62.5
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 8.4e-51 204.1 175 60.0
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.1e-50 203.8 175 62.3
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 1.4e-50 203.4 175 60.0
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 3.2e-50 202.2 172 62.2
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 3.2e-50 202.2 177 61.0
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 4.2e-50 201.8 173 63.6
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 5.5e-50 201.4 172 64.0
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.2e-49 200.3 173 60.1
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 3.5e-49 198.7 172 61.0
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 4.6e-49 198.4 173 61.8
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 6.1e-49 198.0 172 63.4
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 1.0e-48 197.2 172 63.4
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.3e-48 196.8 171 62.0
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 1.8e-48 196.4 172 62.2
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 6.7e-48 194.5 172 61.6
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 6.7e-48 194.5 172 61.6
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 1.9e-47 193.0 172 61.6
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 1.9e-47 193.0 172 61.6
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 1.9e-47 193.0 172 61.6
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 3.3e-47 192.2 177 61.6
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 7.4e-47 191.0 173 58.4
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 1.3e-46 190.3 172 55.8
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 3.7e-46 188.7 161 62.1
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 8.2e-46 187.6 173 60.7
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.5e-44 183.3 162 61.1
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 5.9e-44 181.4 162 60.5
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 7.7e-44 181.0 173 57.2
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 2.9e-43 179.1 173 57.2
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 6.5e-43 177.9 172 57.0
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 3.2e-42 175.6 172 56.4
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 5.5e-42 174.9 172 56.4
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 7.2e-42 174.5 172 57.0
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 7.2e-42 174.5 172 57.0
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 9.4e-42 174.1 177 52.5
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.2e-41 173.7 172 55.8
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 1.6e-41 173.3 172 55.2
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 2.7e-41 172.6 172 55.8
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 3.6e-41 172.2 172 54.7
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 7.9e-41 171.0 170 54.7
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 3.9e-40 168.7 176 50.6
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 4.3e-39 165.2 172 54.1
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 2.8e-38 162.5 172 53.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.4e-37 160.2 147 58.5
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 1.8e-37 159.8 173 48.6
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 6.9e-37 157.9 173 48.6
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 3.4e-36 155.6 173 51.4
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 1.0e-35 154.1 122 62.3
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.3e-35 153.7 164 53.7
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.7e-35 153.3 172 50.0
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 3.8e-35 152.1 174 48.3
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 4.2e-34 148.7 173 52.6
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 4.7e-33 145.2 174 47.7
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 2.3e-32 142.9 173 49.7
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 8.8e-32 141.0 171 46.8
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 4.4e-31 138.7 143 53.1
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.1e-29 132.5 171 46.2
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 9.1e-29 131.0 172 45.3
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 7.7e-28 127.9 173 46.2
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.9e-27 125.9 172 44.8
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 2.9e-27 125.9 151 45.7
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 7.2e-26 121.3 172 42.4
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 2.1e-25 119.8 171 46.2
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 4.7e-25 118.6 172 41.9
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 4.0e-24 115.5 142 43.7
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 1.3e-22 110.5 172 41.9
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 5.0e-19 98.6 134 44.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 4.7e-17 92.0 149 38.3
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 9.8e-15 84.3 108 46.3
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 8.3e-14 81.3 141 33.3
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 2.1e-09 66.6 100 42.0
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.7e-09 66.2 141 30.5
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 8.0e-09 64.7 140 32.9
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 1.0e-08 64.3 139 34.5
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 9.8e-07 57.8 187 28.3
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 1.3e-06 57.4 80 43.8
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 1.7e-06 57.0 89 39.3


User provided reference genes

Program Settings