Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 2.7e-137 492.3 296 100.0
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 4.3e-103 378.6 298 78.9
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 1.2e-102 377.1 298 76.8
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 1.6e-102 376.7 306 79.1
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 1.2e-100 370.5 302 75.2
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 1.1e-98 364.0 309 78.6
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 1.6e-97 360.1 304 71.1
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 1.3e-96 357.1 297 76.8
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.1e-96 355.1 304 71.1
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 1.4e-93 347.1 301 73.4
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.1e-93 345.9 313 68.4
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 3.4e-92 342.4 294 69.7
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.4e-92 342.4 288 75.3
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 4.4e-92 342.0 331 65.3
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 5.8e-92 341.7 293 75.4
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 7.6e-92 341.3 294 69.7
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 5.4e-90 335.1 294 68.4
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 2.7e-89 332.8 299 74.6
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 3.5e-89 332.4 314 66.9
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 1.7e-88 330.1 312 72.1
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 3.9e-88 328.9 317 67.8
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.1e-88 328.6 317 69.1
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 5.1e-88 328.6 306 69.3
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 6.6e-88 328.2 307 70.0
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 6.6e-88 328.2 291 71.8
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 8.7e-88 327.8 312 72.1
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.1e-87 327.4 294 73.5
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.9e-87 326.6 308 67.9
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 9.6e-87 324.3 311 69.8
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.6e-86 323.6 315 63.5
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 4.8e-86 322.0 298 63.1
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 8.1e-86 321.2 298 67.1
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 8.1e-86 321.2 298 66.4
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 1.4e-85 320.5 303 66.7
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 1.8e-85 320.1 300 65.7
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 3.1e-85 319.3 299 73.2
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 3.1e-85 319.3 294 64.3
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 3.1e-85 319.3 293 70.6
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 6.9e-85 318.2 290 69.7
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 1.2e-84 317.4 298 71.8
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 1.5e-84 317.0 321 64.5
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 3.4e-84 315.8 289 72.0
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 4.5e-84 315.5 296 68.9
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 5.8e-84 315.1 310 70.0
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 7.6e-84 314.7 295 67.5
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 9.9e-84 314.3 296 65.5
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.7e-83 313.5 296 64.9
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 1.7e-83 313.5 298 70.1
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 3.8e-83 312.4 293 68.3
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 4.9e-83 312.0 296 65.5
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 4.9e-83 312.0 296 65.5
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 6.4e-83 311.6 296 64.5
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 6.4e-83 311.6 298 69.8
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 6.4e-83 311.6 317 66.2
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 1.1e-82 310.8 290 68.3
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 3.5e-81 305.8 290 70.7
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 3.9e-80 302.4 309 60.2
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 5.1e-80 302.0 314 62.4
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 1.9e-79 300.1 286 72.0
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.3e-79 299.3 311 61.7
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 3.3e-79 299.3 317 61.5
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 3.3e-79 299.3 296 69.3
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 5.6e-79 298.5 320 58.8
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 5.6e-79 298.5 301 67.1
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 7.4e-79 298.1 302 61.3
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 9.6e-79 297.7 293 68.3
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.6e-78 297.0 293 68.9
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.6e-78 297.0 314 59.2
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.6e-78 297.0 314 59.2
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 2.8e-78 296.2 294 67.3
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 1.1e-77 294.3 334 61.1
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 1.4e-77 293.9 299 68.6
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 1.8e-77 293.5 301 67.4
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 4.0e-77 292.4 276 69.6
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 9.0e-77 291.2 284 68.3
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 3.4e-76 289.3 309 64.4
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 3.4e-76 289.3 313 64.5
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 5.8e-76 288.5 308 60.7
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 7.6e-76 288.1 313 64.5
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 2.2e-75 286.6 299 62.9
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 4.9e-75 285.4 345 59.4
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 6.4e-75 285.0 280 61.1
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 2.4e-74 283.1 290 66.6
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 1.2e-73 280.8 307 65.1
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.6e-73 280.4 309 69.6
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 1.6e-73 280.4 296 63.2
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 1.6e-73 280.4 293 63.5
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 1.0e-72 277.7 313 60.1
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.3e-72 277.3 300 68.0
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 2.3e-72 276.6 296 67.9
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 2.3e-72 276.6 293 64.2
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 2.3e-72 276.6 298 66.8
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 3.9e-72 275.8 310 65.5
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 8.7e-72 274.6 295 63.1
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 8.7e-72 274.6 306 63.1
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.9e-71 273.5 308 63.0
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 1.9e-71 273.5 313 59.1
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 2.5e-71 273.1 317 65.9
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 3.3e-71 272.7 306 66.0
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 3.3e-71 272.7 294 66.7
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 2.1e-70 270.0 309 62.8
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 8.1e-70 268.1 305 60.3
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 8.1e-70 268.1 305 60.3
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 1.4e-69 267.3 306 63.1
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 2.4e-69 266.5 312 62.2
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 2.4e-69 266.5 297 63.0
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 2.4e-69 266.5 307 63.5
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 3.1e-69 266.2 291 66.0
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 1.5e-68 263.8 289 63.3
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.5e-68 263.8 394 52.3
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 1.5e-68 263.8 295 64.7
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 3.4e-68 262.7 304 66.1
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 4.5e-68 262.3 285 68.4
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 2.2e-67 260.0 338 53.3
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 3.2e-66 256.1 310 62.3
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 1.0e-64 251.1 306 54.6
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 1.6e-62 243.8 297 63.3
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 4.8e-62 242.3 289 59.9
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 2.4e-61 240.0 224 72.3
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 4.1e-61 239.2 296 59.5
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 5.3e-61 238.8 261 62.5
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 2.6e-60 236.5 306 55.9
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 4.5e-60 235.7 284 58.8
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 5.9e-60 235.3 309 59.9
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 1.3e-59 234.2 304 56.6
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 3.8e-59 232.6 304 55.6
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 8.5e-59 231.5 297 58.6
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 1.9e-58 230.3 304 63.5
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 3.2e-58 229.6 293 53.9
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 1.6e-57 227.3 289 58.5
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 3.6e-57 226.1 316 59.5
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.0e-56 224.6 296 55.4
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 1.5e-55 220.7 297 54.9
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 3.3e-55 219.5 283 57.6
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 9.7e-55 218.0 301 56.1
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 2.8e-54 216.5 208 76.0
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 1.3e-51 207.6 308 50.3
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.9e-51 206.5 206 64.1
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 2.9e-51 206.5 132 72.0
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 3.8e-51 206.1 286 56.6
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 2.5e-50 203.4 300 52.3
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 4.6e-49 199.1 293 53.6
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 7.9e-49 198.4 235 68.1
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.0e-48 198.0 214 65.9
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 3.0e-48 196.4 324 44.8
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.5e-47 194.1 330 45.8
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 7.4e-47 191.8 278 54.0
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 5.9e-44 182.2 237 59.5
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 8.5e-43 178.3 142 65.5
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.9e-42 177.2 226 57.1
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 1.3e-38 164.5 102 80.4
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 1.4e-37 161.0 199 56.8
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 3.2e-34 149.8 168 65.5
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 7.2e-34 148.7 99 71.7
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 1.6e-33 147.5 301 47.5
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.0e-32 143.3 203 58.6
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 1.6e-28 131.0 326 44.5
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 3.8e-27 126.3 320 44.1
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 2.5e-26 123.6 312 44.2
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 7.2e-26 122.1 112 64.3
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.6e-25 120.9 89 74.2
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 1.8e-24 117.5 148 46.6
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 4.0e-24 116.3 202 63.9
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 1.5e-23 114.4 82 74.4
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 4.4e-23 112.8 76 68.4
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 9.8e-23 111.7 328 43.3
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 6.3e-22 109.0 88 68.2
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.8e-21 107.5 107 59.8
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 7.7e-20 102.1 79 73.4
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 7.2e-18 95.5 304 34.2
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 1.6e-17 94.4 75 68.0
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 6.1e-17 92.4 71 70.4
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.0e-16 91.7 64 73.4
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 8.8e-16 88.6 304 41.8
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 1.4e-13 81.3 64 56.2
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.0e-12 77.4 46 91.3
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 8.6e-11 72.0 92 50.0
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 2.5e-10 70.5 78 53.8
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.5e-10 70.5 99 49.5
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 3.6e-09 66.6 84 53.6
Zm00001eb392350 Zea mays HOM05D000367 ORTHO05D001438 2.6e-07 60.5 46 73.9
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 5.7e-07 59.3 263 43.0
SEGI_24544 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.7e-06 57.8 101 46.5
Sabra06G0076200 Salix brachista HOM05D003822 ORTHO05D349384 6.4e-06 55.8 42 64.3


User provided reference genes

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