Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 1.8e-32 142.1 79 100.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 4.9e-22 107.5 68 86.8
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 1.1e-21 106.3 64 89.1
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.6e-20 102.4 68 82.4
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 2.1e-20 102.1 68 80.9
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 2.1e-20 102.1 68 82.4
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.7e-20 101.7 68 82.4
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.7e-20 101.7 68 82.4
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 2.7e-20 101.7 68 82.4
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 3.5e-20 101.3 68 82.4
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 4.6e-20 100.9 68 80.9
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 4.6e-20 100.9 68 80.9
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 6.0e-20 100.5 68 82.4
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 7.8e-20 100.1 64 85.9
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 7.8e-20 100.1 68 80.9
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 7.8e-20 100.1 68 80.9
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 1.0e-19 99.8 68 77.9
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 1.3e-19 99.4 68 80.9
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 1.3e-19 99.4 74 74.3
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 1.7e-19 99.0 69 73.9
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.7e-19 99.0 68 80.9
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 2.3e-19 98.6 68 77.9
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 3.0e-19 98.2 68 79.4
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 3.9e-19 97.8 69 79.7
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 5.1e-19 97.4 68 73.5
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 5.1e-19 97.4 69 76.8
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 8.7e-19 96.7 64 84.4
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 8.7e-19 96.7 68 77.9
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 8.7e-19 96.7 68 80.9
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 8.7e-19 96.7 68 80.9
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 1.5e-18 95.9 68 82.4
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 1.5e-18 95.9 68 79.4
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 1.9e-18 95.5 68 79.4
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 1.9e-18 95.5 68 79.4
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.9e-18 95.5 68 76.5
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 2.5e-18 95.1 68 76.5
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 2.5e-18 95.1 68 72.1
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 3.3e-18 94.7 75 66.7
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.3e-18 94.7 68 77.9
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 4.3e-18 94.4 68 72.1
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 4.3e-18 94.4 68 76.5
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 5.6e-18 94.0 68 76.5
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 5.6e-18 94.0 68 77.9
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 5.6e-18 94.0 68 76.5
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 5.6e-18 94.0 68 76.5
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 7.3e-18 93.6 68 77.9
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 7.3e-18 93.6 68 73.5
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 7.3e-18 93.6 68 76.5
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 7.3e-18 93.6 72 69.4
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 9.6e-18 93.2 68 70.6
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 9.6e-18 93.2 68 70.6
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 9.6e-18 93.2 68 70.6
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 9.6e-18 93.2 68 75.0
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 1.3e-17 92.8 69 73.9
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.6e-17 92.4 65 75.4
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 2.1e-17 92.0 76 63.2
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 2.1e-17 92.0 68 69.1
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 2.1e-17 92.0 68 69.1
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 2.8e-17 91.7 65 70.8
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 2.8e-17 91.7 65 70.8
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 2.8e-17 91.7 65 70.8
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 2.8e-17 91.7 69 73.9
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 2.8e-17 91.7 68 75.0
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 2.8e-17 91.7 68 75.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.8e-17 91.7 68 75.0
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 3.6e-17 91.3 75 64.0
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 3.6e-17 91.3 75 64.0
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 3.6e-17 91.3 68 73.5
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 3.6e-17 91.3 68 73.5
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 4.8e-17 90.9 68 67.6
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 4.8e-17 90.9 68 76.5
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 4.8e-17 90.9 68 72.1
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 4.8e-17 90.9 68 79.4
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 4.8e-17 90.9 68 79.4
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 6.2e-17 90.5 68 67.6
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 6.2e-17 90.5 68 75.0
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 6.2e-17 90.5 76 67.1
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 8.1e-17 90.1 68 67.6
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 1.1e-16 89.7 61 78.7
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 1.1e-16 89.7 64 71.9
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 1.4e-16 89.4 69 71.0
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 1.4e-16 89.4 68 64.7
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 1.4e-16 89.4 68 77.9
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.4e-16 89.4 68 77.9
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.4e-16 89.4 68 77.9
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 1.4e-16 89.4 68 77.9
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 1.4e-16 89.4 72 63.9
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 2.4e-16 88.6 68 70.6
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 2.4e-16 88.6 68 75.0
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 2.4e-16 88.6 61 77.0
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 3.1e-16 88.2 68 76.5
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 4.0e-16 87.8 62 79.0
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 5.3e-16 87.4 68 72.1
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 6.9e-16 87.0 68 75.0
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 9.0e-16 86.7 68 66.2
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 9.0e-16 86.7 68 66.2
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 9.0e-16 86.7 51 92.2
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 9.0e-16 86.7 68 73.5
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 9.0e-16 86.7 68 72.1
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.5e-15 85.9 68 72.1
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 1.5e-15 85.9 64 73.4
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 2.0e-15 85.5 55 83.6
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.0e-15 85.5 68 64.7
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 2.6e-15 85.1 68 70.6
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 2.6e-15 85.1 68 73.5
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 2.6e-15 85.1 74 63.5
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 4.5e-15 84.3 68 69.1
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.5e-15 84.3 68 76.5
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.5e-15 84.3 68 76.5
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 5.8e-15 84.0 65 70.8
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 1.7e-14 82.4 52 78.8
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 2.2e-14 82.0 70 65.7
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 2.2e-14 82.0 68 64.7
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 2.9e-14 81.6 68 66.2
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 2.9e-14 81.6 68 63.2
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.9e-14 81.6 68 76.5
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 8.4e-14 80.1 68 66.2
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 8.4e-14 80.1 69 68.1
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 1.1e-13 79.7 58 74.1
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 1.1e-13 79.7 52 78.8
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 1.4e-13 79.3 58 72.4
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 7.1e-13 77.0 49 81.6
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 9.3e-13 76.6 68 63.2
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 2.7e-12 75.1 68 57.4
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 4.6e-12 74.3 50 74.0
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.3e-11 72.8 61 62.3
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 3.9e-11 71.2 60 65.0
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 4.3e-10 67.8 71 52.1
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 7.4e-10 67.0 75 48.0
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 4.8e-09 64.3 62 58.1
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 4.8e-09 64.3 73 54.8
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 1.8e-08 62.4 66 63.6
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 2.4e-08 62.0 70 45.7
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 4.5e-07 57.8 59 52.5
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 7.6e-07 57.0 34 91.2


User provided reference genes

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