Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 6.5e-171 604.0 305 100.0
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 3.0e-168 595.1 305 98.0
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.9e-139 498.8 305 83.0
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.5e-130 469.9 305 77.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 4.7e-121 438.3 305 70.8
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 8.3e-118 427.6 304 70.1
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.8e-117 426.4 304 70.1
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 2.0e-116 422.9 305 70.8
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.7e-116 422.5 294 72.4
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 5.9e-116 421.4 306 68.0
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.0e-115 420.6 304 67.1
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.0e-115 420.6 305 70.5
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 1.3e-115 420.2 304 69.7
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 5.0e-115 418.3 298 69.8
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 6.6e-115 417.9 305 69.5
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 7.3e-114 414.5 305 68.9
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 9.5e-114 414.1 297 69.0
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 9.5e-114 414.1 297 69.0
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.2e-113 413.7 300 70.3
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.6e-113 413.3 305 68.9
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 2.8e-113 412.5 300 68.3
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 6.1e-113 411.4 305 69.5
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 4.0e-112 408.7 302 68.5
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 8.9e-112 407.5 294 72.4
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 3.4e-111 405.6 329 63.8
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 4.4e-111 405.2 300 69.3
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.4e-109 400.2 305 66.6
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 7.0e-109 397.9 299 68.6
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 9.2e-109 397.5 305 65.6
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.3e-107 393.7 305 66.2
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 2.3e-107 392.9 300 65.7
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 2.8e-105 386.0 305 64.6
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 5.2e-104 381.7 308 62.0
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.2e-103 380.6 305 63.6
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.3e-102 377.1 362 54.4
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 1.7e-102 376.7 305 63.3
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.7e-102 376.7 305 63.3
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.7e-102 376.7 305 60.3
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 2.2e-102 376.3 301 63.8
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 6.4e-102 374.8 305 63.3
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.9e-101 373.2 305 63.0
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 3.2e-101 372.5 304 62.5
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 3.2e-101 372.5 305 62.6
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 3.2e-101 372.5 307 61.9
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 9.2e-101 370.9 307 61.2
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 2.0e-100 369.8 307 61.2
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 2.7e-100 369.4 304 61.8
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 3.5e-100 369.0 305 61.3
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.0e-99 367.5 305 61.6
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.3e-99 367.1 305 62.6
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 3.0e-99 365.9 305 63.0
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.0e-99 365.2 305 60.7
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 8.6e-99 364.4 305 63.3
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 8.6e-99 364.4 299 60.2
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 8.6e-99 364.4 305 62.0
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 1.5e-98 363.6 307 60.6
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 3.3e-98 362.5 303 61.7
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 7.3e-98 361.3 305 60.3
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.6e-97 360.1 308 61.4
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 2.1e-97 359.8 307 59.6
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 8.1e-97 357.8 305 61.3
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 8.1e-97 357.8 305 61.3
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 1.1e-96 357.5 304 61.5
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.1e-96 357.5 305 60.3
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.4e-96 357.1 305 60.0
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 1.8e-96 356.7 305 61.0
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 1.8e-96 356.7 305 61.0
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 4.0e-96 355.5 313 59.4
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 6.8e-96 354.8 304 57.9
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 1.2e-95 354.0 306 60.5
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 2.0e-95 353.2 305 61.3
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.0e-95 353.2 293 62.8
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 3.4e-95 352.4 305 58.4
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 5.8e-95 351.7 294 60.9
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 7.5e-95 351.3 305 57.4
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.7e-94 350.1 305 59.7
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.2e-94 349.7 305 58.0
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.1e-93 347.4 303 59.4
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.4e-93 347.1 305 57.7
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 7.1e-93 344.7 305 57.0
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.6e-92 343.6 304 59.2
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.6e-92 343.6 278 63.7
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 4.6e-92 342.0 305 57.7
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 7.8e-92 341.3 305 59.0
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.9e-90 336.7 305 55.7
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 2.5e-90 336.3 305 56.7
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 9.5e-90 334.3 303 57.4
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.3e-88 329.7 305 55.7
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 2.6e-87 326.2 309 55.7
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 2.7e-84 316.2 306 52.0
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 2.5e-82 309.7 305 55.4
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.7e-81 305.4 277 55.2
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.1e-80 304.3 314 50.3
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.8e-80 303.5 314 50.3
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.7e-75 287.0 269 54.6
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 5.1e-75 285.4 306 50.3
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.9e-74 283.5 210 67.1
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.9e-70 269.6 188 76.1
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.9e-69 266.9 200 67.5
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.5e-68 262.7 305 51.8
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 2.3e-67 260.0 242 57.4
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 2.8e-65 253.1 271 51.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 8.1e-65 251.5 201 62.7
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 4.2e-45 186.0 251 41.0
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 3.0e-43 179.9 192 53.6
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 2.1e-36 157.1 217 43.8
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.3e-35 153.7 104 67.3
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.7e-33 147.5 305 29.8
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 2.2e-33 147.1 121 61.2
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.9e-29 134.0 127 53.5
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.1e-28 130.6 127 52.0
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.1e-28 130.6 127 52.0
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 2.7e-28 130.2 120 56.7
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 8.0e-28 128.6 120 54.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 3.0e-27 126.7 103 63.1
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 4.4e-26 122.9 120 52.5
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 9.7e-26 121.7 141 46.1
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 4.1e-24 116.3 130 48.5
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.9e-22 110.2 254 38.6
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 2.9e-22 110.2 282 29.8
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 2.5e-21 107.1 67 76.1
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 3.2e-21 106.7 67 76.1
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.8e-19 100.9 67 71.6
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.2e-12 78.2 64 56.2
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 4.8e-09 66.2 81 43.2
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 2.0e-07 60.8 123 34.1


User provided reference genes

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