Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 9.9e-144 513.5 264 100.0
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.2e-101 373.6 271 73.8
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 8.5e-95 350.9 268 71.6
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.2e-91 340.5 273 68.5
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 7.7e-88 327.8 216 77.3
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 1.3e-87 327.0 273 65.6
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 1.0e-84 317.4 277 65.3
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 3.0e-84 315.8 268 66.4
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 5.2e-84 315.1 272 66.5
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.2e-83 313.9 217 75.1
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 3.4e-83 312.4 267 62.2
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 7.5e-83 311.2 271 63.1
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.7e-82 310.1 273 64.1
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 1.1e-81 307.4 198 75.8
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 7.0e-81 304.7 266 65.8
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 9.2e-81 304.3 271 63.5
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 1.6e-80 303.5 272 63.2
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 2.7e-80 302.8 267 63.7
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 1.1e-78 297.4 273 63.0
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 1.5e-78 297.0 200 74.0
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 5.6e-78 295.0 224 68.8
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 2.1e-77 293.1 271 64.9
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 2.8e-77 292.7 265 64.9
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 2.8e-77 292.7 265 64.9
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 3.6e-77 292.4 275 60.7
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 4.7e-77 292.0 281 58.4
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 6.1e-77 291.6 223 68.6
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 8.0e-77 291.2 269 61.7
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.0e-76 290.8 239 67.4
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 3.0e-76 289.3 272 61.0
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 4.0e-76 288.9 271 61.3
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 8.9e-76 287.7 265 58.5
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.2e-75 287.3 223 68.6
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.5e-75 287.0 273 61.5
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 2.0e-75 286.6 270 60.7
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 4.4e-75 285.4 268 60.8
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 5.7e-75 285.0 178 79.2
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 9.8e-75 284.3 196 71.4
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 9.8e-75 284.3 196 71.4
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 9.8e-75 284.3 196 71.4
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.3e-74 283.9 241 66.0
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 1.7e-74 283.5 186 74.2
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 3.7e-74 282.3 274 59.1
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 4.9e-74 282.0 271 59.0
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.1e-73 280.8 266 60.9
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.6e-72 276.9 223 67.3
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 4.6e-72 275.4 256 61.3
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 7.8e-72 274.6 239 61.5
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.3e-71 273.9 246 61.8
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.3e-71 273.9 272 60.7
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.3e-71 273.1 268 59.3
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.0e-71 271.9 272 60.7
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.9e-70 270.0 282 57.4
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 5.6e-70 268.5 270 58.9
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 9.5e-70 267.7 265 58.1
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 2.8e-69 266.2 214 63.6
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 4.7e-69 265.4 279 56.6
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 6.2e-69 265.0 283 57.2
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 1.4e-68 263.8 267 56.6
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 1.4e-68 263.8 297 53.5
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 3.1e-68 262.7 192 68.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 4.0e-68 262.3 262 60.3
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 6.8e-68 261.5 276 58.3
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 1.2e-67 260.8 195 67.7
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 1.2e-67 260.8 264 56.8
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 7.5e-67 258.1 273 54.2
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 9.8e-67 257.7 202 63.4
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 2.2e-66 256.5 255 58.4
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 3.7e-66 255.8 212 63.7
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.1e-65 254.2 210 62.9
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 1.1e-65 254.2 214 63.6
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.9e-65 253.4 264 55.3
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 5.4e-65 251.9 268 53.0
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.2e-64 250.8 246 55.3
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 2.7e-64 249.6 268 54.5
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 4.6e-64 248.8 267 52.1
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.0e-63 247.7 204 66.7
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 1.7e-63 246.9 270 55.6
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 5.0e-63 245.4 280 55.4
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 8.6e-63 244.6 282 55.3
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 1.1e-62 244.2 192 63.0
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.5e-62 243.8 280 55.7
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 2.5e-62 243.0 222 57.2
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 6.2e-61 238.4 215 64.7
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 6.8e-60 235.0 220 55.5
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 2.0e-59 233.4 280 50.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.4e-57 227.3 215 56.7
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 2.4e-57 226.5 263 51.7
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 9.2e-57 224.6 243 53.9
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-56 224.2 243 53.5
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 1.6e-56 223.8 243 53.9
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.1e-56 223.4 262 51.1
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 2.7e-56 223.0 269 52.4
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 7.8e-56 221.5 244 52.5
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 1.0e-55 221.1 264 50.4
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 2.3e-55 219.9 241 51.5
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 3.9e-55 219.2 243 53.1
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 5.1e-55 218.8 239 51.9
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 5.1e-55 218.8 268 50.4
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 6.6e-55 218.4 204 55.4
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 8.6e-55 218.0 244 52.5
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.1e-54 217.6 238 52.5
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 2.5e-54 216.5 270 50.7
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 2.5e-54 216.5 270 50.7
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 2.5e-54 216.5 270 50.7
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 2.1e-53 213.4 236 50.8
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 3.1e-52 209.5 155 62.6
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 5.2e-52 208.8 240 50.8
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 4.1e-49 199.1 247 51.8
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 1.9e-46 190.3 180 53.9
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 6.2e-45 185.3 157 56.1
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 1.7e-42 177.2 184 47.8
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 8.4e-42 174.9 272 47.4
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 5.4e-41 172.2 159 52.2
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 7.1e-41 171.8 159 52.2
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 2.1e-40 170.2 142 61.3
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.4e-36 157.5 195 42.6
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 9.9e-35 151.4 171 45.6
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 6.4e-34 148.7 117 67.5
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 6.0e-32 142.1 188 41.0
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 2.8e-29 133.3 167 41.3
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 6.9e-28 128.6 108 63.9


User provided reference genes

Program Settings