Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 4.3e-83 311.2 153 100.0
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 3.6e-53 211.8 111 88.3
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 2.0e-51 206.1 111 85.6
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.7e-50 203.0 111 83.8
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 1.7e-50 203.0 111 83.8
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 3.7e-50 201.8 111 82.9
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 4.1e-49 198.4 111 83.8
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 1.6e-48 196.4 110 82.7
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 2.0e-48 196.1 111 80.2
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 2.7e-48 195.7 111 81.1
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 3.5e-48 195.3 111 82.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 3.5e-48 195.3 111 82.0
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 3.5e-48 195.3 111 76.6
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 5.9e-48 194.5 104 85.6
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 1.7e-47 193.0 111 79.3
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.7e-47 193.0 111 78.4
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.7e-47 193.0 111 76.6
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 2.9e-47 192.2 111 78.4
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.8e-47 191.8 111 76.6
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 3.8e-47 191.8 111 80.2
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 6.5e-47 191.0 111 79.3
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 1.5e-46 189.9 111 78.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.5e-46 189.9 111 78.4
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 4.2e-46 188.3 111 76.6
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 4.2e-46 188.3 111 75.7
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 4.2e-46 188.3 111 75.7
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.2e-45 186.8 111 73.9
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.2e-45 186.8 111 76.6
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.2e-45 186.8 111 76.6
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.6e-45 186.4 111 75.7
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.6e-45 186.4 111 75.7
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 2.7e-45 185.7 111 75.7
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 2.7e-45 185.7 111 75.7
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 6.1e-45 184.5 111 73.9
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 6.1e-45 184.5 111 73.0
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 8.0e-45 184.1 109 75.2
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 1.0e-44 183.7 111 75.7
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.4e-44 183.3 111 76.6
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.3e-44 182.6 108 75.9
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 5.2e-44 181.4 117 68.4
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 6.8e-44 181.0 111 73.9
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 8.8e-44 180.6 111 73.0
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 1.2e-43 180.3 103 77.7
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.2e-43 180.3 111 73.9
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 2.0e-43 179.5 108 75.0
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 2.0e-43 179.5 116 69.0
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 2.0e-43 179.5 104 77.9
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 2.6e-43 179.1 111 73.0
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 2.6e-43 179.1 109 74.3
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 2.6e-43 179.1 111 72.1
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 3.4e-43 178.7 111 73.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 4.4e-43 178.3 111 73.0
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 4.4e-43 178.3 111 73.0
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 4.4e-43 178.3 111 73.0
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 4.4e-43 178.3 116 68.1
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 4.4e-43 178.3 116 68.1
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 7.5e-43 177.6 111 72.1
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.3e-42 176.8 129 65.9
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.7e-42 176.4 112 72.3
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 2.8e-42 175.6 110 70.9
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 2.8e-42 175.6 110 68.2
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 4.9e-42 174.9 111 70.3
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 6.3e-42 174.5 111 71.2
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 1.1e-41 173.7 111 69.4
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.1e-41 173.7 110 70.0
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.4e-41 173.3 111 70.3
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.4e-41 173.3 97 84.5
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.4e-41 173.3 111 70.3
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 2.4e-41 172.6 108 68.5
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 4.1e-41 171.8 136 61.8
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 2.7e-40 169.1 111 66.7
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 5.9e-40 167.9 111 67.6
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.7e-39 166.4 115 67.0
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 3.3e-38 162.2 97 75.3
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.8e-36 156.4 116 59.5
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 6.8e-36 154.5 82 90.2
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 2.2e-34 149.4 111 59.5
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 2.0e-32 142.9 92 75.0
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 6.6e-31 137.9 81 79.0
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 1.5e-30 136.7 81 75.3
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 8.0e-29 131.0 87 71.3
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.3e-28 129.4 88 70.5
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.3e-28 129.4 88 70.5
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 2.6e-27 125.9 125 56.8
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 3.4e-27 125.6 95 64.2
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 4.4e-27 125.2 82 69.5
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.4e-27 125.2 67 86.6
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 1.3e-26 123.6 89 67.4
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.3e-26 123.6 96 62.5
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.7e-26 123.2 97 48.5
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 2.2e-26 122.9 95 63.2
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 4.9e-26 121.7 101 47.5
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 1.1e-25 120.6 81 69.1
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 3.2e-25 119.0 94 61.7
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 3.2e-25 119.0 103 52.4
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 4.1e-25 118.6 81 66.7
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 5.4e-25 118.2 110 52.7
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 2.7e-24 115.9 77 66.2
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.0e-23 114.0 69 75.4
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.1e-22 110.5 60 81.7
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 9.5e-22 107.5 81 58.0
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 2.2e-18 96.3 67 64.2
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.0e-11 73.2 50 62.0
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 7.1e-09 64.7 78 47.4
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 7.1e-09 64.7 78 47.4
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 3.5e-08 62.4 36 72.2
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.9e-07 58.9 104 29.8


User provided reference genes

Program Settings