Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 3.1e-150 535.4 332 100.0
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 5.1e-113 411.8 332 74.7
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 8.7e-105 384.4 329 71.4
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.1e-104 384.0 330 69.4
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 7.4e-104 381.3 330 72.4
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.3e-103 380.6 330 71.2
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 5.3e-102 375.2 329 69.9
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 5.3e-102 375.2 333 66.7
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 6.9e-102 374.8 330 69.4
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.6e-101 372.9 332 64.5
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 3.4e-101 372.5 331 74.3
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 3.4e-101 372.5 331 74.3
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.4e-101 372.5 328 70.7
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 2.5e-99 366.3 326 65.6
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 3.2e-99 365.9 329 68.1
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 9.4e-99 364.4 318 68.9
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.6e-98 363.6 331 68.6
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 6.1e-98 361.7 332 70.5
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 6.1e-98 361.7 326 67.2
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 1.0e-97 360.9 318 69.2
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 3.9e-97 359.0 329 66.9
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 6.7e-97 358.2 318 67.9
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 8.8e-97 357.8 324 63.9
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.5e-96 357.1 332 63.3
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 3.3e-96 355.9 331 67.4
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 2.8e-95 352.8 331 68.3
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 3.7e-95 352.4 325 72.9
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.4e-94 350.5 320 73.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 1.5e-93 347.1 336 67.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.5e-93 347.1 325 69.5
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.0e-93 346.7 332 69.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 2.0e-93 346.7 327 63.6
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 2.6e-93 346.3 328 72.0
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 2.6e-93 346.3 324 68.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 3.4e-93 345.9 338 62.1
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.0e-92 344.4 332 66.6
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.3e-92 344.0 328 65.9
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 2.9e-92 342.8 325 66.5
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 5.0e-92 342.0 328 69.8
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.1e-91 340.9 332 67.2
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.1e-91 340.9 325 70.8
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.4e-91 340.5 328 63.4
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.9e-91 340.1 320 66.2
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 4.2e-91 339.0 341 62.2
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.2e-90 337.4 353 56.7
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 2.7e-90 336.3 327 70.3
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 6.1e-90 335.1 321 66.7
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 8.0e-90 334.7 326 66.9
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.0e-89 334.3 328 65.2
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 3.9e-89 332.4 329 64.4
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 2.6e-88 329.7 328 64.6
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.3e-88 329.3 328 64.6
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 4.4e-88 328.9 328 63.1
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.3e-87 327.4 327 64.2
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.7e-87 327.0 320 64.7
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.8e-87 326.2 329 58.4
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 3.7e-87 325.9 319 64.9
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 3.7e-87 325.9 327 64.5
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.1e-86 324.3 353 55.5
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.4e-86 323.9 320 65.0
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.8e-86 323.6 329 63.2
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.4e-86 323.2 329 62.6
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 7.0e-86 321.6 332 60.2
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.6e-85 320.5 316 69.0
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 2.6e-85 319.7 318 73.0
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 3.5e-85 319.3 320 65.6
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 3.5e-85 319.3 318 66.7
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 3.5e-85 319.3 321 69.2
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 3.5e-85 319.3 316 68.7
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.9e-85 318.5 318 73.0
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.9e-85 318.5 318 73.0
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 7.7e-85 318.2 329 64.4
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 1.0e-84 317.8 348 50.9
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.2e-84 316.6 320 65.0
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 1.1e-83 314.3 330 62.7
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.9e-83 313.5 316 67.4
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 5.5e-83 312.0 325 61.2
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 1.0e-81 307.8 319 65.8
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 2.3e-81 306.6 326 63.5
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 1.5e-80 303.9 353 52.4
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 4.4e-80 302.4 323 58.2
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 1.7e-79 300.4 328 56.1
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 2.8e-79 299.7 328 58.5
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.2e-79 298.1 318 61.6
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 9.1e-78 294.7 333 60.1
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.6e-77 293.9 330 58.5
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.7e-76 290.4 328 57.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 2.9e-76 289.7 333 58.6
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.8e-76 289.3 336 55.1
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.8e-76 289.3 328 56.7
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.5e-75 286.6 314 58.9
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.0e-73 281.2 293 66.2
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 8.8e-73 278.1 331 63.1
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 3.1e-70 269.6 282 66.3
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.4e-64 249.6 331 58.6
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 1.3e-63 247.7 327 56.3
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.6e-61 240.7 318 61.0
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 1.0e-57 228.0 313 54.0
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 4.1e-54 216.1 171 61.4
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 9.2e-54 214.9 203 62.6
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.5e-53 213.0 203 53.7
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.2e-50 204.5 169 58.0
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.8e-50 203.4 168 58.9
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 2.8e-50 203.4 261 44.4
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.2e-48 198.0 168 58.3
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 4.4e-48 196.1 170 57.6
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-47 194.1 204 50.5
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.2e-45 188.0 170 56.5
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.1e-45 187.2 207 48.8
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 3.0e-44 183.3 203 60.1
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 7.3e-43 178.7 170 57.1
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 1.2e-40 171.4 139 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.0e-36 158.3 210 69.0
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.5e-32 144.4 342 44.2
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.1e-30 138.3 163 49.7
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.7e-28 131.0 112 61.6
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.7e-28 131.0 101 63.4
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.6e-26 123.2 80 75.0
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 6.2e-26 122.5 83 74.7
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.7e-23 114.4 85 70.6
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 6.4e-23 112.5 253 29.2
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 7.1e-22 109.0 173 46.2
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.5e-19 101.3 88 58.0
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 1.1e-17 95.1 65 70.8
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 1.2e-13 81.6 348 35.9
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.0e-12 78.6 351 27.4
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 1.5e-11 74.7 127 38.6
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.4e-09 68.2 58 58.6
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 6.9e-09 65.9 142 34.5
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 5.5e-06 56.2 44 65.9


User provided reference genes

Program Settings