Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 1.0e-73 280.4 187 100.0
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 2.2e-36 156.4 126 67.5
QL10p048018 Quercus lobata HOM05D007277 ORTHO05D337307 4.6e-26 122.1 89 68.5
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 3.7e-20 102.4 120 47.5
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 6.0e-18 95.1 123 43.9
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-17 94.0 113 48.7
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 3.3e-16 89.4 122 40.2
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 4.3e-16 89.0 121 42.1
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 4.0e-14 82.4 106 37.7
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.8e-14 81.6 121 38.8
Potri.017G019932 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.6e-13 79.7 107 40.2
Potri.017G022262 Populus trichocarpa HOM05D010635 ORTHO05D006336 2.6e-13 79.7 106 42.5
Potri.017G018901 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.4e-13 79.3 107 40.2
Potri.017G019000 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.4e-13 79.3 106 41.5
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.8e-13 78.6 123 36.6
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 5.8e-13 78.6 106 37.7
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 7.6e-13 78.2 108 38.0
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 9.9e-13 77.8 106 36.8
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 9.9e-13 77.8 106 36.8
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 2.9e-12 76.3 116 35.3
Sabra07G0108200 Salix brachista HOM05D010635 ORTHO05D006336 2.9e-12 76.3 105 44.8
Sabra07G0119900 Salix brachista HOM05D010635 ORTHO05D006336 2.9e-12 76.3 109 43.1
TAR636G1532 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.9e-12 76.3 105 41.0
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 3.7e-12 75.9 109 44.0
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 6.4e-12 75.1 109 41.3
Potri.017G021796 Populus trichocarpa HOM05D010635 ORTHO05D006336 8.4e-12 74.7 109 40.4
Sabra17G0002100 Salix brachista HOM05D010635 ORTHO05D006336 2.4e-11 73.2 110 37.3
Sabra17G0014600 Salix brachista HOM05D010635 ORTHO05D006336 4.1e-11 72.4 110 37.3
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 7.1e-11 71.6 106 35.8
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-10 70.9 104 36.5
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.2e-10 70.9 113 38.1
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 2.1e-10 70.1 95 41.1
Sabra07G0108100 Salix brachista HOM05D010635 ORTHO05D006336 2.1e-10 70.1 124 37.1
Sabra07G0120400 Salix brachista HOM05D010635 ORTHO05D006336 2.1e-10 70.1 106 39.6
Sabra03G0023900 Salix brachista HOM05D010635 ORTHO05D006336 2.7e-10 69.7 105 38.1
TAR636G0488 Trochodendron aralioides HOM05D000568 ORTHO05D000628 2.7e-10 69.7 104 37.5
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 3.5e-10 69.3 114 36.0
TAR636G3203 Trochodendron aralioides HOM05D012741 ORTHO05D006336 4.6e-10 68.9 104 39.4
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 6.0e-10 68.6 123 32.5
Sabra07G0108000 Salix brachista HOM05D010635 ORTHO05D006336 6.0e-10 68.6 109 40.4
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 1.0e-09 67.8 103 35.9
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 1.3e-09 67.4 108 36.1
Potri.013G084650 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.3e-09 67.4 84 44.0
TAR371G0786 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.3e-09 66.6 112 33.0
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 3.0e-09 66.2 104 33.7
TAR371G1152 Trochodendron aralioides HOM05D012741 ORTHO05D006336 3.9e-09 65.9 98 36.7
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 6.6e-09 65.1 126 31.0
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 8.6e-09 64.7 106 33.0
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.1e-08 64.3 131 32.8
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.9e-08 63.5 121 31.4
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 1.9e-08 63.5 113 31.9
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.9e-08 63.5 113 31.9
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 2.5e-08 63.2 144 27.8
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 3.3e-08 62.8 103 35.0
Sabra07G0119800 Salix brachista HOM05D010635 ORTHO05D006336 4.3e-08 62.4 108 38.9
COL.COLO4_28375 Corchorus olitorius HOM05D010298 ORTHO05D012539 5.6e-08 62.0 109 37.6
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 5.6e-08 62.0 112 32.1
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.6e-08 61.2 112 31.2
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 9.6e-08 61.2 104 35.6
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 1.2e-07 60.8 112 31.2
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.2e-07 60.8 112 31.2
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-07 60.8 104 30.8
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.8e-07 59.7 102 31.4
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.8e-07 59.7 112 31.2
Sed0012100 Sechium edule HOM05D014519 ORTHO05D006336 2.8e-07 59.7 123 33.3
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 3.6e-07 59.3 106 33.0
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 4.7e-07 58.9 108 34.3
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 6.2e-07 58.5 93 32.3
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 6.2e-07 58.5 108 28.7
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 8.1e-07 58.2 95 32.6
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 1.1e-06 57.8 111 36.9
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 1.4e-06 57.4 101 31.7
Thecc.09G294000 Theobroma cacao HOM05D010298 ORTHO05D012539 1.8e-06 57.0 108 30.6
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 2.4e-06 56.6 125 29.6
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 4.0e-06 55.8 125 33.6
Atru.chr12.1464 Acer truncatum HOM05D007277 ORTHO05D006336 5.2e-06 55.5 103 31.1
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 5.2e-06 55.5 114 33.3
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 6.8e-06 55.1 113 31.0
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 8.9e-06 54.7 94 30.9


User provided reference genes

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