Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 8.8e-94 347.1 189 100.0
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 1.2e-79 300.1 182 92.3
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 1.3e-52 210.3 182 65.9
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 3.7e-52 208.8 193 65.8
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 3.4e-45 185.7 190 57.9
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 9.9e-45 184.1 182 57.1
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 4.9e-44 181.8 192 57.8
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.4e-43 180.3 185 56.8
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 2.4e-43 179.5 182 59.3
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 5.4e-43 178.3 176 58.0
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.2e-42 177.2 119 73.1
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.6e-42 176.8 180 57.8
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 2.7e-42 176.0 195 55.4
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 4.6e-42 175.3 123 70.7
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 6.0e-42 174.9 180 57.8
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.8e-42 174.5 181 54.7
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.7e-41 173.3 183 57.9
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 2.3e-41 172.9 180 55.0
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 3.9e-41 172.2 210 51.4
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 6.6e-41 171.4 122 71.3
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.1e-40 170.6 177 54.8
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.5e-40 170.2 180 57.2
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.5e-40 169.5 184 56.5
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 4.3e-40 168.7 182 56.6
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 5.6e-40 168.3 191 49.2
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 7.3e-40 167.9 184 56.0
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 9.6e-40 167.5 127 64.6
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.2e-39 167.2 173 57.2
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.6e-39 166.8 207 54.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 2.1e-39 166.4 121 65.3
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 3.6e-39 165.6 174 53.4
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 4.7e-39 165.2 181 52.5
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 4.7e-39 165.2 194 53.6
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 6.2e-39 164.9 199 50.8
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 6.2e-39 164.9 172 60.5
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 8.1e-39 164.5 123 62.6
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 2.4e-38 162.9 184 50.5
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 4.0e-38 162.2 126 67.5
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 6.9e-38 161.4 180 53.3
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 6.9e-38 161.4 156 54.5
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 9.0e-38 161.0 180 50.0
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 1.2e-37 160.6 186 51.1
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 1.5e-37 160.2 191 49.7
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 2.0e-37 159.8 174 52.9
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.0e-37 159.8 122 63.1
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.0e-37 159.8 188 52.7
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 2.0e-37 159.8 176 51.7
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 3.4e-37 159.1 178 51.7
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 3.4e-37 159.1 178 51.7
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 3.4e-37 159.1 188 50.0
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 4.4e-37 158.7 186 50.0
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 4.4e-37 158.7 186 50.0
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 4.4e-37 158.7 196 51.5
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 5.8e-37 158.3 188 52.1
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 5.8e-37 158.3 180 50.6
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 9.9e-37 157.5 200 49.5
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.3e-36 157.1 117 63.2
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.3e-36 157.1 117 63.2
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 2.9e-36 156.0 182 51.6
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 3.8e-36 155.6 178 49.4
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 3.8e-36 155.6 166 51.2
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 4.9e-36 155.2 175 50.3
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 4.9e-36 155.2 188 51.6
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.9e-35 153.3 178 48.9
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.2e-35 152.5 195 50.8
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 5.4e-35 151.8 154 55.2
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 7.1e-35 151.4 124 62.1
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 7.1e-35 151.4 122 63.1
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 9.3e-35 151.0 118 63.6
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 2.7e-34 149.4 172 51.7
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 3.5e-34 149.1 170 47.6
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 6.0e-34 148.3 196 49.0
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 7.8e-34 147.9 174 50.0
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 7.8e-34 147.9 123 61.0
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 7.8e-34 147.9 181 48.6
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.3e-33 146.4 126 60.3
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 5.1e-33 145.2 120 62.5
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 6.6e-33 144.8 118 62.7
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 8.7e-33 144.4 122 59.8
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 4.3e-32 142.1 121 57.0
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.3e-31 140.6 163 50.3
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 2.1e-31 139.8 179 48.0
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 2.1e-31 139.8 179 44.1
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 3.6e-31 139.0 191 45.5
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 4.8e-31 138.7 146 50.7
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 1.4e-30 137.1 174 48.3
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 2.4e-30 136.3 111 60.4
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 3.1e-30 136.0 185 47.0
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 5.3e-30 135.2 152 51.3
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.5e-29 133.7 111 60.4
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.0e-29 133.3 133 54.9
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.6e-29 132.9 184 43.5
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 4.5e-29 132.1 122 59.0
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 9.9e-29 131.0 91 65.9
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 4.9e-28 128.6 90 67.8
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 4.9e-28 128.6 129 48.1
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 6.4e-28 128.3 118 53.4
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 8.4e-28 127.9 160 52.5
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 1.4e-27 127.1 98 63.3
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.9e-27 126.7 186 43.0
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 2.4e-27 126.3 186 43.0
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 5.1e-25 118.6 78 64.1
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.9e-24 116.7 114 52.6
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 8.1e-23 111.3 173 41.0
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.4e-22 109.8 91 61.5
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 5.3e-22 108.6 173 43.9
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.7e-20 103.6 91 58.2
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.6e-18 97.1 181 39.8
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 2.7e-18 96.3 172 40.7
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 1.3e-17 94.0 118 43.2
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 3.0e-17 92.8 165 35.8
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 5.6e-16 88.6 201 40.8
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 8.2e-15 84.7 189 33.9
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.7e-12 77.0 212 31.6
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 4.9e-12 75.5 115 40.0
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.5e-11 72.0 53 62.3
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.3e-09 66.6 49 59.2
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 9.0e-06 54.7 43 60.5


User provided reference genes

Program Settings