Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p045737 Quercus lobata HOM05D007128 ORTHO05D009059 1.2e-148 530.8 546 100.0
QL10p044765 Quercus lobata HOM05D007128 ORTHO05D009059 4.5e-82 309.7 500 56.4
Lj6C70T2 Lonicera japonica HOM05D007128 ORTHO05D009059 3.1e-75 287.0 533 72.2
Haze_00709 Corylus avellana HOM05D007128 ORTHO05D009059 7.5e-69 265.8 559 74.1
QL10p046158 Quercus lobata HOM05D007128 ORTHO05D009059 2.8e-68 263.8 138 96.4
Cfa015785 Carpinus fangiana HOM05D007128 ORTHO05D009059 6.3e-68 262.7 559 73.7
CiPaw.01G104100 Carya illinoinensis HOM05D007128 ORTHO05D009059 5.0e-65 253.1 559 73.2
RcHm_v2.0_Chr4g0408411 Rosa chinensis HOM05D007128 ORTHO05D009059 1.7e-57 228.0 560 69.1
Glyma.01G233900 Glycine max HOM05D007128 ORTHO05D009059 7.2e-56 222.6 538 68.6
CiPaw.01G097300 Carya illinoinensis HOM05D007128 ORTHO05D009059 1.6e-55 221.5 136 80.9
QL10p046885 Quercus lobata HOM05D007128 ORTHO05D009059 8.0e-55 219.2 153 75.8
TWI38G2031 Tripterygium wilfordii HOM05D007128 ORTHO05D009059 1.0e-54 218.8 561 72.2
VMungo1309G2539 Vigna mungo HOM05D007128 ORTHO05D009059 4.0e-54 216.9 558 68.8
Phvul.002G041300 Phaseolus vulgaris HOM05D007128 ORTHO05D009059 1.3e-52 211.8 560 67.9
FAN07G2448 Fragaria x ananassa HOM05D007128 ORTHO05D009059 2.8e-52 210.7 560 65.4
FvH4_4g11500 Fragaria vesca HOM05D007128 ORTHO05D009059 1.4e-51 208.4 145 67.6
MD04G1034700 Malus domestica HOM05D007128 ORTHO05D009059 2.7e-50 204.1 152 65.1
Thecc.04G183700 Theobroma cacao HOM05D007128 ORTHO05D009059 3.5e-50 203.8 137 70.1
Glyma.11G009000 Glycine max HOM05D007128 ORTHO05D009059 5.9e-50 203.0 145 70.3
Lalb_Chr09g0320101 Lupinus albus HOM05D007128 ORTHO05D009059 2.3e-49 201.1 554 67.9
FAN22G1219 Fragaria x ananassa HOM05D007128 ORTHO05D009059 2.9e-49 200.7 141 66.7
Sabra07G0100100 Salix brachista HOM05D007128 ORTHO05D009059 2.9e-49 200.7 561 65.6
TPR.G18647 Trifolium pratense HOM05D007128 ORTHO05D009059 2.9e-49 200.7 558 67.0
Atru.chr3.1624 Acer truncatum HOM05D007128 ORTHO05D009059 3.8e-49 200.3 138 68.8
CSS0003119 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 3.3e-48 197.2 138 69.6
TAR633G0543 Trochodendron aralioides HOM05D007128 ORTHO05D009059 3.3e-48 197.2 138 71.0
Psat2g189360 Pisum sativum HOM05D007128 ORTHO05D009059 4.3e-48 196.8 558 67.4
Gohir.D02G016000 Gossypium hirsutum HOM05D007128 ORTHO05D009059 5.6e-48 196.4 136 69.9
Gorai.005G019500 Gossypium raimondii HOM05D007128 ORTHO05D009059 5.6e-48 196.4 136 69.9
CSS0046383 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 9.5e-48 195.7 138 68.8
GSVIVG01013571001 Vitis vinifera HOM05D007128 ORTHO05D009059 1.2e-47 195.3 137 69.3
arahy.Tifrunner.gnm1.ann1.Q2Q9DA Arachis hypogaea HOM05D007128 ORTHO05D009059 3.6e-47 193.7 561 66.8
COL.COLO4_24378 Corchorus olitorius HOM05D007128 ORTHO05D009059 3.6e-47 193.7 130 72.3
Gohir.A02G014400 Gossypium hirsutum HOM05D007128 ORTHO05D009059 6.1e-47 193.0 137 68.6
Duzib151G0548 Durio zibethinus HOM05D007128 ORTHO05D009059 1.0e-46 192.2 137 68.6
Ciclev10018682m.g Citrus clementina HOM05D007128 ORTHO05D009059 1.4e-46 191.8 136 69.1
Potri.007G123600 Populus trichocarpa HOM05D007128 ORTHO05D009059 3.0e-46 190.7 136 68.4
Sed0021713 Sechium edule HOM05D007128 ORTHO05D009059 4.0e-46 190.3 140 63.6
arahy.Tifrunner.gnm1.ann1.IE5CWM Arachis hypogaea HOM05D007128 ORTHO05D009059 5.2e-46 189.9 560 66.6
LjContig00222g0017157 Lotus japonicus HOM05D007128 ORTHO05D009059 5.2e-46 189.9 144 68.1
Cpa.g.sc71.41 Carica papaya HOM05D007128 ORTHO05D009059 6.8e-46 189.5 137 66.4
Ca_24431_v3 Cicer arietinum L. HOM05D007128 ORTHO05D009059 1.5e-45 188.3 558 67.0
Eucgr.A00240 Eucalyptus grandis HOM05D007128 ORTHO05D009059 2.6e-45 187.6 562 65.8
PGR083G1825 Punica granatum HOM05D007128 ORTHO05D009059 4.4e-45 186.8 149 62.4
Dinv22679 Davidia involucrata HOM05D007128 ORTHO05D009059 9.8e-45 185.7 137 70.1
EL10Ac4g09187 Beta vulgaris HOM05D007128 ORTHO05D009059 1.3e-44 185.3 153 56.9
Nn5g27627 Nelumbo nucifera HOM05D007128 ORTHO05D009059 1.7e-44 184.9 138 66.7
Aqoxy2G03122 Aquilegia oxysepala HOM05D007128 ORTHO05D009059 6.4e-44 183.0 136 65.4
FAN17G2288 Fragaria x ananassa HOM05D007128 ORTHO05D009059 6.4e-44 183.0 143 60.8
Gohir.A02G014300 Gossypium hirsutum HOM05D007128 ORTHO05D009059 8.3e-44 182.6 138 61.6
Manes.14G160600 Manihot esculenta HOM05D007128 ORTHO05D009059 1.4e-43 181.8 561 66.3
ClCG08G004220 Citrullus lanatus HOM05D007128 ORTHO05D009059 1.9e-43 181.4 141 60.3
Eucgr.L00553 Eucalyptus grandis HOM05D007128 ORTHO05D009059 3.2e-43 180.6 138 61.6
MELO3C011605.2 Cucumis melo HOM05D007128 ORTHO05D009059 4.1e-43 180.3 137 61.3
CsaV3_6G003710 Cucumis sativus L. HOM05D007128 ORTHO05D009059 7.0e-43 179.5 137 60.6
Prupe.1G186300 Prunus persica HOM05D007128 ORTHO05D009059 7.0e-43 179.5 136 64.0
Gorai.005G019400 Gossypium raimondii HOM05D007128 ORTHO05D009059 1.6e-42 178.3 135 60.7
PGSC0003DMG400016718 Solanum tuberosum HOM05D007128 ORTHO05D009059 2.7e-42 177.6 560 62.7
CANSAT78G2527 Cannabis sativa HOM05D007128 ORTHO05D009059 3.5e-42 177.2 136 64.0
Medtr5g007250 Medicago truncatula HOM05D007128 ORTHO05D009059 7.8e-42 176.0 558 65.9
Nitab4.5_0000286g0010 Nicotiana tabacum HOM05D007128 ORTHO05D009059 3.0e-41 174.1 562 62.3
Actinidia11313 Actinidia chinensis HOM05D007128 ORTHO05D009059 3.9e-41 173.7 140 65.7
CAN.G1681.10 Capsicum annuum HOM05D007128 ORTHO05D009059 8.6e-41 172.6 557 62.3
ECA248G2224 Erigeron canadensis HOM05D007128 ORTHO05D009059 1.9e-40 171.4 148 56.1
Sopen02g025900 Solanum pennellii HOM05D007128 ORTHO05D009059 2.5e-40 171.0 560 62.1
PSO782G4906 Papaver somniferum HOM05D007128 ORTHO05D009059 3.3e-40 170.6 147 58.5
Solyc02g081250.3 Solanum lycopersicum HOM05D000189 ORTHO05D009059 5.6e-40 169.9 560 62.0
PSO566G0116 Papaver somniferum HOM05D007128 ORTHO05D009059 1.2e-39 168.7 147 57.8
Oeu061587.1 Olea europaea HOM05D007128 ORTHO05D009059 2.8e-39 167.5 136 59.6
DCAR_005541 Daucus carota HOM05D007128 ORTHO05D009059 5.2e-38 163.3 136 58.8
Cc03_g13390 Coffea canephora HOM05D007128 ORTHO05D009059 8.9e-38 162.5 140 58.6
CDE07G1249 Ceratophyllum demersum HOM05D007128 ORTHO05D009059 1.2e-37 162.2 149 54.4
BcaNung05934 Brassica carinata HOM05D000703 ORTHO05D000633 7.5e-37 159.5 154 51.3
AUR62004993 Chenopodium quinoa HOM05D007128 ORTHO05D009059 7.5e-37 159.5 144 54.9
Rhsim02G0072100 Rhododendron simsii HOM05D007128 ORTHO05D009059 7.5e-37 159.5 123 64.2
AUR62000973 Chenopodium quinoa HOM05D007128 ORTHO05D009059 9.8e-37 159.1 146 53.4
SalBow6G5229 Salvia bowleyana HOM05D007128 ORTHO05D009059 3.7e-36 157.1 136 51.5
Sc16g0009730 Simmondsia chinensis HOM05D007128 ORTHO05D009059 4.9e-36 156.8 134 59.0
SGA_v2.0_scaffold31G12566 Striga asiatica HOM05D007128 ORTHO05D009059 1.4e-35 155.2 559 60.8
CSS0016083 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 2.7e-34 151.0 101 70.3
Os04g0488500 Oryza sativa ssp. japonica HOM05D007128 ORTHO05D009059 7.8e-34 149.4 145 51.7
Hund13263 Selenicereus undatus HOM05D007128 ORTHO05D000105 7.8e-34 149.4 137 54.0
MBI11_g35037_MAGBIO Magnolia biondii HOM05D007128 ORTHO05D009059 1.0e-33 149.1 141 53.2
Lj6C61T6 Lonicera japonica HOM05D007128 ORTHO05D009059 3.0e-33 147.5 155 52.3
Zm00001eb078990 Zea mays HOM05D007128 ORTHO05D009059 1.1e-32 145.6 146 50.7
CARHR006390 Cardamine hirsuta HOM05D007128 ORTHO05D009059 4.3e-32 143.7 136 54.4
THA.LOC104826248 Tarenaya hassleriana HOM05D007128 ORTHO05D009059 4.3e-32 143.7 135 53.3
SHI23551 Sapria himalayana HOM05D007128 ORTHO05D009059 7.3e-32 142.9 138 54.3
C05p04890 Brassica napus HOM05D007128 ORTHO05D009059 1.6e-31 141.7 552 63.9
Gohir.D02G015950 Gossypium hirsutum HOM05D007128 ORTHO05D009059 1.6e-31 141.7 135 52.6
Carub.0001s0604 Capsella rubella HOM05D007128 ORTHO05D009059 8.1e-31 139.4 137 52.6
A10p05290 Brassica napus HOM05D007128 ORTHO05D009059 2.6e-29 134.4 562 62.3
BraA10t42794Z Brassica rapa HOM05D007128 ORTHO05D009059 1.1e-27 129.0 556 62.6
Aa31LG1G7750 Aethionema arabicum HOM05D007128 ORTHO05D009059 4.1e-27 127.1 136 47.8
Migut.N00468 Erythranthe guttata HOM05D007128 ORTHO05D009059 5.6e-24 116.7 136 42.6
BolC5t29261H Brassica oleracea HOM05D007128 ORTHO05D009059 1.6e-23 115.2 552 62.1
HPP92_007610 Vanilla planifolia HOM05D007128 ORTHO05D009059 1.4e-22 112.1 151 42.4
Rhsim02G0073500 Rhododendron simsii HOM05D007128 ORTHO05D009059 1.8e-22 111.7 123 52.8
Sp1g05440 Schrenkiella parvula HOM05D007128 ORTHO05D009059 2.4e-22 111.3 136 44.1
Thhalv10006683m.g Eutrema salsugineum HOM05D007128 ORTHO05D009059 4.0e-22 110.5 136 42.6
AT1G06710 Arabidopsis thaliana HOM05D007128 ORTHO05D009059 5.2e-22 110.2 136 43.4
HanXRQChr16g0502661 Helianthus annuus HOM05D007128 ORTHO05D009059 2.0e-21 108.2 89 56.2
AL1G16720 Arabidopsis lyrata HOM05D007128 ORTHO05D009059 2.6e-21 107.8 136 42.6
ATR0743G184 Amborella trichopoda HOM05D007128 ORTHO05D009059 6.4e-20 103.2 136 46.3
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 1.9e-19 101.7 68 60.3
MSTRG.26768 Avicennia marina HOM05D007128 ORTHO05D009059 7.8e-18 96.3 62 69.4
SEGI_08126 Sequoiadendron giganteum HOM05D007128 ORTHO05D009059 1.0e-09 69.3 53 62.3
ECA233G6190 Erigeron canadensis HOM05D007145 ORTHO05D008952 8.1e-07 59.7 149 29.5


User provided reference genes

Program Settings