Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 9.8e-49 196.4 96 100.0
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 2.8e-48 194.9 96 99.0
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 4.7e-43 177.6 94 89.4
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 1.0e-42 176.4 93 89.2
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 5.2e-42 174.1 94 86.2
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 8.9e-42 173.3 92 88.0
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 3.4e-41 171.4 92 88.0
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 7.5e-41 170.2 92 87.0
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 7.5e-41 170.2 92 87.0
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 1.7e-40 169.1 92 87.0
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 6.3e-40 167.2 92 84.8
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.8e-39 165.6 93 86.0
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 2.4e-39 165.2 93 86.0
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 7.0e-39 163.7 93 87.1
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 7.0e-39 163.7 95 83.2
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 3.5e-38 161.4 93 82.8
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 7.8e-38 160.2 93 83.9
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 1.3e-37 159.5 95 82.1
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 2.3e-37 158.7 93 79.6
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.3e-37 158.7 93 80.6
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 2.9e-37 158.3 93 80.6
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 2.9e-37 158.3 93 81.7
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.9e-37 158.3 93 81.7
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.9e-37 158.3 93 81.7
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 8.6e-37 156.8 93 79.6
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.9e-36 155.6 92 78.3
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.9e-36 155.6 94 76.6
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 3.3e-36 154.8 92 80.4
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 3.3e-36 154.8 92 79.3
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 1.6e-35 152.5 92 79.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 1.6e-35 152.5 93 77.4
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 1.6e-35 152.5 93 77.4
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.6e-35 152.5 98 74.5
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 2.1e-35 152.1 84 85.7
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 3.6e-35 151.4 94 77.7
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 4.7e-35 151.0 93 77.4
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 6.1e-35 150.6 93 78.5
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 6.1e-35 150.6 93 75.3
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 6.1e-35 150.6 93 78.5
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 6.1e-35 150.6 83 86.7
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 6.1e-35 150.6 93 74.2
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 8.0e-35 150.2 93 77.4
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.4e-34 149.4 94 76.6
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 1.4e-34 149.4 93 76.3
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 1.4e-34 149.4 93 76.3
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.4e-34 149.4 85 82.4
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.4e-34 149.4 84 84.5
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 1.8e-34 149.1 93 76.3
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 1.8e-34 149.1 93 76.3
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 1.8e-34 149.1 93 76.3
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 3.1e-34 148.3 88 80.7
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 3.1e-34 148.3 83 84.3
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 4.0e-34 147.9 88 79.5
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 4.0e-34 147.9 85 83.5
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 4.0e-34 147.9 84 82.1
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 4.0e-34 147.9 90 75.6
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 5.2e-34 147.5 88 77.3
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 6.8e-34 147.1 92 78.3
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 8.9e-34 146.7 84 81.0
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.2e-33 146.4 93 74.2
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.5e-33 146.0 83 79.5
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 2.0e-33 145.6 84 79.8
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 2.6e-33 145.2 94 74.5
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.6e-33 145.2 84 82.1
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 3.4e-33 144.8 93 75.3
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 4.4e-33 144.4 87 78.2
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 7.5e-33 143.7 87 74.7
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 9.8e-33 143.3 94 74.5
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 9.8e-33 143.3 94 74.5
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 1.7e-32 142.5 83 78.3
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 2.9e-32 141.7 81 82.7
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.9e-32 141.7 83 81.9
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.9e-32 141.7 83 81.9
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 4.9e-32 141.0 95 73.7
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 6.4e-32 140.6 83 80.7
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.3e-32 140.2 84 75.0
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 1.1e-31 139.8 93 75.3
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 1.4e-31 139.4 79 82.3
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 1.9e-31 139.0 82 80.5
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.9e-31 139.0 84 77.4
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.1e-31 137.9 84 76.2
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 5.4e-31 137.5 84 76.2
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 5.4e-31 137.5 95 68.4
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 7.0e-31 137.1 90 71.1
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 9.2e-31 136.7 84 75.0
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 9.2e-31 136.7 90 72.2
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 1.2e-30 136.3 93 67.7
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.7e-30 135.2 84 77.4
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.7e-30 135.2 84 75.0
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 4.6e-30 134.4 92 71.7
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.3e-29 132.9 75 85.3
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 2.3e-29 132.1 93 68.8
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 5.0e-29 131.0 81 75.3
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 9.5e-28 126.7 81 74.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 1.2e-27 126.3 80 73.8
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 8.0e-27 123.6 69 85.5
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 8.0e-27 123.6 81 70.4
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 2.9e-24 115.2 68 75.0
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 1.4e-23 112.8 81 64.2
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 4.1e-23 111.3 80 63.8
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 2.8e-19 98.6 80 52.5
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.8e-18 95.9 61 70.5
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 1.8e-18 95.9 80 52.5
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 1.2e-17 93.2 55 85.5
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 2.0e-17 92.4 57 78.9
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.7e-16 89.4 55 80.0
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 8.3e-16 87.0 80 50.0
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.1e-15 86.7 54 81.5
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 7.8e-14 80.5 54 70.4
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 7.3e-12 73.9 54 66.7
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 9.6e-12 73.6 52 65.4
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.4e-10 68.9 56 71.4
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 5.2e-10 67.8 40 70.0
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 5.8e-09 64.3 86 44.2
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.6e-09 63.9 55 69.1
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.3e-08 63.2 83 43.4


User provided reference genes

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