Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 1.2e-99 366.7 204 100.0
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 1.1e-81 307.0 182 92.3
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 2.0e-51 206.5 183 63.9
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 3.8e-50 202.2 196 63.3
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.8e-47 193.4 129 74.4
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 5.7e-46 188.3 188 59.6
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 9.6e-46 187.6 187 54.0
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 2.1e-45 186.4 179 61.5
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 3.7e-45 185.7 139 69.1
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 1.4e-44 183.7 124 72.6
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.4e-44 183.7 186 58.6
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 2.4e-44 183.0 193 56.0
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 1.5e-43 180.3 186 56.5
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.5e-43 180.3 126 69.8
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.0e-43 179.9 186 55.9
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.6e-43 179.5 124 67.7
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 2.6e-43 179.5 125 71.2
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 5.9e-43 178.3 124 66.9
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 7.6e-43 177.9 127 66.9
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.0e-42 177.6 130 70.8
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.0e-42 177.6 124 71.0
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 2.9e-42 176.0 122 72.1
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 2.9e-42 176.0 134 67.9
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.8e-42 175.6 186 55.9
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 3.8e-42 175.6 127 70.9
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 8.5e-42 174.5 197 54.3
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 5.5e-41 171.8 125 67.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 9.3e-41 171.0 128 66.4
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 9.3e-41 171.0 128 66.4
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 9.3e-41 171.0 125 65.6
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 9.3e-41 171.0 125 65.6
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 9.3e-41 171.0 128 66.4
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.2e-40 170.6 200 52.5
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 2.1e-40 169.9 122 67.2
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 2.7e-40 169.5 123 66.7
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 3.6e-40 169.1 128 65.6
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 3.6e-40 169.1 125 65.6
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 3.6e-40 169.1 125 65.6
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.6e-40 169.1 125 64.8
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 4.6e-40 168.7 177 53.7
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 1.0e-39 167.5 124 66.1
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.3e-39 167.2 126 63.5
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.3e-39 167.2 124 65.3
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.8e-39 166.8 124 62.9
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 2.3e-39 166.4 123 66.7
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 3.0e-39 166.0 124 65.3
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 3.9e-39 165.6 127 68.5
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 8.7e-39 164.5 173 51.4
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 1.1e-38 164.1 199 49.7
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 1.1e-38 164.1 129 64.3
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.1e-38 164.1 183 48.1
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.5e-38 163.7 122 66.4
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.9e-38 163.3 120 63.3
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.5e-38 162.9 124 64.5
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 5.7e-38 161.8 122 63.1
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 9.7e-38 161.0 186 47.8
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 1.3e-37 160.6 118 65.3
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 2.2e-37 159.8 118 64.4
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 2.2e-37 159.8 120 65.0
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.8e-37 159.5 183 49.7
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.7e-37 159.1 172 57.0
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 3.7e-37 159.1 117 65.0
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 6.3e-37 158.3 123 63.4
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 5.3e-36 155.2 127 62.2
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 6.9e-36 154.8 125 63.2
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 6.9e-36 154.8 123 64.2
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 6.9e-36 154.8 132 60.6
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 6.9e-36 154.8 120 64.2
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 9.0e-36 154.5 119 64.7
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.2e-35 154.1 122 60.7
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.0e-35 153.3 130 63.1
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 2.6e-35 152.9 127 55.9
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 3.4e-35 152.5 183 49.7
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.7e-35 151.4 129 62.8
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 1.7e-34 150.2 124 62.1
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 2.2e-34 149.8 123 62.6
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 3.8e-34 149.1 121 57.9
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 5.0e-34 148.7 124 60.5
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 6.5e-34 148.3 127 60.6
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 6.5e-34 148.3 132 58.3
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 8.5e-34 147.9 123 61.8
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 8.5e-34 147.9 119 63.0
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.1e-33 147.5 129 52.7
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 1.4e-33 147.1 117 59.0
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 3.2e-33 146.0 132 59.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 9.4e-33 144.4 122 57.4
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 7.9e-32 141.4 122 58.2
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.3e-31 139.8 120 59.2
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.0e-31 139.4 127 55.1
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 3.9e-31 139.0 112 60.7
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 2.6e-30 136.3 112 60.7
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.6e-30 136.3 134 56.0
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 3.3e-30 136.0 130 55.4
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 4.3e-30 135.6 126 58.7
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 4.3e-30 135.6 130 55.4
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 2.2e-29 133.3 92 66.3
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.2e-29 131.3 91 68.1
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.1e-28 131.0 133 48.1
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 2.4e-28 129.8 122 51.6
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 1.5e-27 127.1 98 63.3
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 3.4e-27 125.9 155 52.9
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.9e-25 120.2 79 64.6
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.9e-25 120.2 132 49.2
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.6e-24 117.1 114 52.6
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 2.3e-23 113.2 126 50.8
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.6e-22 109.8 87 63.2
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 7.4e-22 108.2 92 58.7
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 1.1e-20 104.4 121 44.6
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.8e-20 103.6 87 59.8
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 3.1e-20 102.8 127 48.0
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 2.2e-18 96.7 122 42.6
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 4.2e-17 92.4 120 50.0
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 5.5e-17 92.0 127 41.7
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 4.4e-14 82.4 156 35.3
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 6.3e-13 78.6 121 39.7
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.0e-10 71.2 53 62.3
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.5e-09 66.6 49 59.2
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 9.8e-06 54.7 43 60.5


User provided reference genes

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