Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 3.7e-85 318.2 158 100.0
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 2.5e-78 295.4 149 98.7
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 6.5e-66 254.2 157 80.9
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 1.1e-65 253.4 159 83.0
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 3.0e-63 245.4 159 78.0
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 3.9e-63 245.0 158 78.5
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 7.4e-62 240.7 158 77.2
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 1.4e-60 236.5 159 74.8
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 5.3e-60 234.6 157 77.1
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 4.5e-59 231.5 158 72.2
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 5.9e-59 231.1 164 73.8
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 1.7e-58 229.6 153 77.1
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 1.7e-58 229.6 152 77.0
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 2.9e-58 228.8 158 74.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 6.5e-58 227.6 160 71.9
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 9.4e-57 223.8 161 73.3
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.2e-56 223.4 159 71.7
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.2e-56 223.4 159 71.7
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.2e-56 223.4 159 71.7
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-56 223.0 159 71.7
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.0e-55 220.3 159 71.1
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 1.0e-55 220.3 162 71.6
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 1.8e-55 219.5 158 71.5
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 2.3e-55 219.2 169 68.0
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 3.3e-54 215.3 163 67.5
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 4.4e-54 214.9 152 77.0
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 2.8e-53 212.2 161 70.8
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 2.8e-53 212.2 158 70.9
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 4.8e-53 211.5 159 71.7
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 4.8e-53 211.5 171 69.0
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 4.8e-53 211.5 158 69.6
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 8.2e-53 210.7 155 73.5
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 8.2e-53 210.7 159 70.4
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 3.1e-52 208.8 165 69.1
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 4.1e-52 208.4 161 68.3
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 5.3e-52 208.0 163 68.1
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.6e-51 206.5 161 70.2
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 4.5e-51 204.9 162 67.9
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 4.5e-51 204.9 158 67.7
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 7.7e-51 204.1 169 65.1
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 1.0e-50 203.8 169 65.1
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 2.9e-50 202.2 159 66.7
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 3.8e-50 201.8 170 65.9
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 8.5e-50 200.7 164 67.1
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 9.4e-49 197.2 168 63.7
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 1.2e-48 196.8 160 70.0
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 2.1e-48 196.1 160 66.2
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 2.1e-48 196.1 160 67.5
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 2.1e-48 196.1 159 64.8
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 2.7e-48 195.7 160 66.2
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 3.6e-48 195.3 155 68.4
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 3.6e-48 195.3 161 68.3
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.4e-47 193.4 162 64.2
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.8e-47 193.0 173 60.7
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 2.3e-47 192.6 167 65.3
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 3.0e-47 192.2 161 65.8
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 1.2e-46 190.3 160 65.0
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 2.0e-46 189.5 153 63.4
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 5.7e-46 188.0 162 63.6
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 1.3e-45 186.8 161 63.4
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 2.2e-45 186.0 91 94.5
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 2.8e-45 185.7 155 69.0
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.7e-45 185.3 161 61.5
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 3.7e-45 185.3 161 61.5
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 6.3e-45 184.5 144 66.7
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 8.3e-45 184.1 178 60.7
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 8.3e-45 184.1 154 64.3
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 8.3e-45 184.1 171 62.6
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 1.4e-44 183.3 169 63.3
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 1.4e-44 183.3 156 65.4
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 1.8e-44 183.0 167 61.1
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 2.4e-44 182.6 93 88.2
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 4.1e-44 181.8 173 60.7
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 5.4e-44 181.4 128 71.1
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 7.0e-44 181.0 91 90.1
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 9.1e-44 180.6 169 57.4
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 1.2e-43 180.3 91 86.8
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 1.6e-43 179.9 160 63.1
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 1.6e-43 179.9 160 60.0
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.3e-42 176.8 181 56.4
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 3.8e-42 175.3 152 63.2
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 3.8e-42 175.3 151 64.2
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 8.5e-42 174.1 140 65.7
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 2.1e-40 169.5 100 79.0
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.0e-39 167.2 85 89.4
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 4.0e-39 165.2 182 52.2
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 7.5e-38 161.0 159 58.5
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 9.8e-38 160.6 85 85.9
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 9.8e-38 160.6 81 90.1
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 3.7e-37 158.7 162 56.8
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 8.3e-37 157.5 82 86.6
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 5.4e-36 154.8 77 88.3
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 2.0e-35 152.9 80 86.2
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 1.7e-34 149.8 87 78.2
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 5.0e-34 148.3 75 88.0
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 1.5e-33 146.7 68 97.1
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 9.5e-33 144.1 113 65.5
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 1.2e-32 143.7 82 80.5
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 2.1e-32 142.9 113 61.1
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 2.3e-31 139.4 136 63.2
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.2e-29 132.9 88 70.5
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 4.6e-27 125.2 121 57.0
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 2.3e-23 112.8 117 56.4
Actinidia06621 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.7e-10 70.1 88 56.8


User provided reference genes

Program Settings