Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p042656 Quercus lobata HOM05D000043 ORTHO05D026247 6.1e-45 183.7 90 100.0
QL10p042542 Quercus lobata HOM05D000043 ORTHO05D002208 3.6e-21 104.8 55 90.9
CiPaw.04G081000 Carya illinoinensis HOM05D000043 ORTHO05D002208 2.3e-15 85.5 62 67.7
Cfa002923 Carpinus fangiana HOM05D000043 ORTHO05D002208 8.7e-15 83.6 63 63.5
Haze_25280 Corylus avellana HOM05D000043 ORTHO05D002208 1.6e-13 79.3 63 61.9
TWI79G1187 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 2.4e-12 75.5 88 45.5
TWI31G1078 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 1.7e-10 69.3 88 43.2
Prupe.4G274000 Prunus persica HOM05D000043 ORTHO05D002208 8.4e-10 67.0 51 62.7
FvH4_1g24540 Fragaria vesca HOM05D000043 ORTHO05D002208 5.4e-09 64.3 51 60.8
FAN26G1417 Fragaria x ananassa HOM05D000043 ORTHO05D002208 5.4e-09 64.3 51 60.8
FAN28G0895 Fragaria x ananassa HOM05D000043 ORTHO05D002208 5.4e-09 64.3 51 60.8
MD01G1006300 Malus domestica HOM05D000043 ORTHO05D002208 5.4e-09 64.3 51 60.8
Sabra05G0053900 Salix brachista HOM05D000043 ORTHO05D002208 5.4e-09 64.3 53 62.3
FAN23G1449 Fragaria x ananassa HOM05D000043 ORTHO05D002208 9.3e-09 63.5 51 60.8
TAR376G0221 Trochodendron aralioides HOM05D000043 ORTHO05D002208 2.1e-08 62.4 52 53.8
PGR119G1168 Punica granatum HOM05D000043 ORTHO05D002208 2.7e-08 62.0 93 39.8
Atru.chr4.858 Acer truncatum HOM05D000043 ORTHO05D026247 3.5e-08 61.6 85 44.7
MD15G1134400 Malus domestica HOM05D000043 ORTHO05D002208 3.5e-08 61.6 51 54.9
Glyma.08G001100 Glycine max HOM05D000043 ORTHO05D026247 1.0e-07 60.1 52 55.8
Manes.12G157400 Manihot esculenta HOM05D000043 ORTHO05D002208 1.0e-07 60.1 52 57.7
Ciclev10001207m.g Citrus clementina HOM05D000043 ORTHO05D002208 1.7e-07 59.3 62 48.4
arahy.Tifrunner.gnm1.ann1.2547FM Arachis hypogaea HOM05D000043 ORTHO05D002208 3.9e-07 58.2 51 51.0
arahy.Tifrunner.gnm1.ann1.G5DPCC Arachis hypogaea HOM05D000043 ORTHO05D002208 3.9e-07 58.2 51 51.0
Hma1.2p1_0539F.1_g174520 Hydrangea macrophylla HOM05D000043 ORTHO05D002208 5.1e-07 57.8 55 54.5
Potri.005G065100 Populus trichocarpa HOM05D000043 ORTHO05D002208 5.1e-07 57.8 44 65.9
Ca_16957_v3 Cicer arietinum L. HOM05D000043 ORTHO05D002208 8.7e-07 57.0 51 52.9
Thecc.01G135400 Theobroma cacao HOM05D000043 ORTHO05D002208 8.7e-07 57.0 63 49.2
RcHm_v2.0_Chr2g0121951 Rosa chinensis HOM05D000043 ORTHO05D002208 1.1e-06 56.6 51 54.9
Dinv24395 Davidia involucrata HOM05D000043 ORTHO05D002208 1.5e-06 56.2 52 57.7
Lalb_Chr12g0203111 Lupinus albus HOM05D000043 ORTHO05D002208 1.5e-06 56.2 51 51.0
Nn5g28486 Nelumbo nucifera HOM05D000043 ORTHO05D002208 1.5e-06 56.2 51 56.9
MELO3C023521.2 Cucumis melo HOM05D000043 ORTHO05D002208 1.9e-06 55.8 52 53.8
CsaV3_7G031370 Cucumis sativus L. HOM05D000043 ORTHO05D002208 3.3e-06 55.1 64 48.4
ClCG09G003860 Citrullus lanatus HOM05D000043 ORTHO05D002208 5.6e-06 54.3 62 50.0
Eucgr.I00187 Eucalyptus grandis HOM05D000043 ORTHO05D002208 5.6e-06 54.3 52 48.1
Sed0028197 Sechium edule HOM05D000043 ORTHO05D002208 5.6e-06 54.3 88 33.0
Psat7g045000 Pisum sativum HOM05D000043 ORTHO05D002208 7.3e-06 53.9 53 52.8
ClCG01G015190 Citrullus lanatus HOM05D000043 ORTHO05D002208 9.6e-06 53.5 63 41.3


User provided reference genes

Program Settings