Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 6.3e-91 337.4 171 100.0
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.2e-89 333.2 171 98.8
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 3.2e-74 282.0 169 82.2
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 5.4e-74 281.2 169 84.0
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 1.2e-73 280.0 169 82.2
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 2.0e-73 279.3 164 84.8
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 4.5e-73 278.1 168 82.7
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 5.9e-73 277.7 166 81.9
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 5.9e-73 277.7 166 81.9
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 7.8e-73 277.3 167 81.4
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 1.7e-72 276.2 166 81.3
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 2.9e-72 275.4 169 81.1
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 6.6e-72 274.2 165 81.8
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 1.1e-71 273.5 165 81.8
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 2.5e-71 272.3 166 80.7
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 4.3e-71 271.6 163 81.6
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 9.5e-71 270.4 163 79.8
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 9.5e-71 270.4 165 80.6
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 9.5e-71 270.4 163 82.8
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 9.5e-71 270.4 163 82.8
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 1.2e-70 270.0 166 81.9
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 2.1e-70 269.2 163 81.6
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 3.6e-70 268.5 169 79.3
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 4.7e-70 268.1 171 77.8
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 6.1e-70 267.7 163 79.8
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 1.8e-69 266.2 166 80.1
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 3.1e-69 265.4 162 81.5
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 3.1e-69 265.4 163 79.8
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 5.2e-69 264.6 168 81.0
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 5.2e-69 264.6 163 79.8
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 6.8e-69 264.2 159 81.8
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 1.2e-68 263.5 165 79.4
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 2.6e-68 262.3 176 76.7
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 2.6e-68 262.3 163 79.1
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 4.4e-68 261.5 171 78.4
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 9.8e-68 260.4 166 78.3
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 9.8e-68 260.4 163 79.1
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.3e-67 260.0 180 75.0
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.7e-67 259.6 180 75.0
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 2.2e-67 259.2 197 68.5
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 1.1e-66 256.9 160 79.4
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 3.2e-66 255.4 162 79.6
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 4.1e-66 255.0 166 76.5
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 9.2e-66 253.8 163 73.6
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 1.2e-65 253.4 160 78.1
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 2.7e-65 252.3 162 75.9
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 6.0e-65 251.1 171 72.5
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.3e-64 250.0 162 77.8
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 1.3e-64 250.0 160 76.9
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 1.7e-64 249.6 165 75.2
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 1.7e-64 249.6 160 76.9
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 2.3e-64 249.2 161 78.3
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 6.6e-64 247.7 169 72.2
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 1.5e-63 246.5 170 70.6
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 3.3e-63 245.4 162 75.9
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 4.3e-63 245.0 169 72.2
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 4.3e-63 245.0 162 74.7
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 5.6e-63 244.6 163 73.6
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 9.5e-63 243.8 170 71.2
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 1.2e-62 243.4 165 71.5
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 2.8e-62 242.3 163 73.0
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 3.6e-62 241.9 159 72.3
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 3.6e-62 241.9 169 71.0
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 4.7e-62 241.5 159 72.3
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 4.7e-62 241.5 159 73.0
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 4.7e-62 241.5 163 76.1
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 6.2e-62 241.1 159 73.6
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 1.1e-61 240.4 165 71.5
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 1.1e-61 240.4 165 71.5
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 1.8e-61 239.6 168 70.8
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 1.8e-61 239.6 165 70.9
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 3.1e-61 238.8 159 71.7
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 3.1e-61 238.8 159 73.0
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 5.2e-61 238.0 169 70.4
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 6.8e-61 237.7 160 73.1
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 6.8e-61 237.7 165 71.5
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 8.9e-61 237.3 155 74.8
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 8.9e-61 237.3 155 74.8
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 8.9e-61 237.3 165 70.9
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 1.2e-60 236.9 155 74.2
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 1.5e-60 236.5 165 70.9
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 1.5e-60 236.5 165 70.9
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 2.6e-60 235.7 167 72.5
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 7.5e-60 234.2 152 80.3
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 9.8e-60 233.8 160 71.9
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 9.8e-60 233.8 163 69.9
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 1.3e-59 233.4 159 71.7
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.3e-59 233.4 161 73.3
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 2.2e-59 232.6 165 70.3
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 1.9e-58 229.6 162 69.1
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 2.4e-58 229.2 159 72.3
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.2e-57 226.9 166 66.9
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 1.6e-57 226.5 160 68.8
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 2.3e-56 222.6 157 71.3
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 8.6e-56 220.7 159 69.8
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 5.2e-53 211.5 139 73.4
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.2e-52 210.3 164 66.5
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 1.5e-52 209.9 158 67.1
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 1.1e-50 203.8 159 64.2
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.1e-50 203.8 163 63.2
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 5.6e-47 191.4 165 63.6
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.6e-46 189.9 185 55.1
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 8.1e-46 187.6 157 60.5
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 8.1e-46 187.6 157 60.5
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 1.1e-42 177.2 156 61.5
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 5.4e-42 174.9 154 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 9.3e-42 174.1 159 54.7
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 1.5e-36 156.8 169 52.1
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 8.4e-35 151.0 169 50.3
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 1.2e-33 147.1 93 76.3
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 1.2e-33 147.1 158 49.4
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 7.8e-33 144.4 169 46.2
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.1e-31 140.6 82 84.1
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 5.6e-31 138.3 156 48.7
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 4.8e-30 135.2 82 80.5
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 5.3e-29 131.7 87 73.6
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 9.3e-26 120.9 85 78.8
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 2.1e-25 119.8 82 70.7
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-24 117.1 76 71.1
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.5e-23 112.8 96 61.5
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 3.3e-23 112.5 159 37.7
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 4.3e-23 112.1 76 68.4
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 4.8e-22 108.6 76 67.1
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 2.4e-21 106.3 69 71.0
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 2.7e-17 92.8 100 49.0
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 1.9e-15 86.7 135 37.8
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-11 73.9 79 48.1
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 1.7e-11 73.6 55 72.7
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 2.5e-10 69.7 114 39.5
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 4.6e-09 65.5 52 61.5
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 8.7e-08 61.2 57 56.1


User provided reference genes

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