Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.6e-149 532.7 269 100.0
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.9e-89 333.2 171 98.8
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 8.7e-87 324.3 246 72.0
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.3e-82 310.5 271 63.8
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 1.4e-81 307.0 276 64.9
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 4.6e-80 302.0 243 68.7
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 2.3e-79 299.7 207 76.3
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 6.7e-79 298.1 222 69.8
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 3.3e-78 295.8 229 70.7
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 4.3e-78 295.4 226 69.9
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 5.7e-78 295.0 269 64.3
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.3e-77 293.9 197 74.6
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 2.1e-77 293.1 190 78.9
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 3.1e-76 289.3 269 61.7
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 9.0e-76 287.7 184 78.8
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 1.2e-75 287.3 190 76.8
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 5.9e-75 285.0 196 71.4
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 7.6e-75 284.6 269 62.5
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.3e-74 283.9 190 75.8
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 2.2e-74 283.1 241 65.6
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 3.8e-74 282.3 207 72.9
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 3.8e-74 282.3 222 68.0
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 3.2e-73 279.3 188 76.6
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 4.2e-73 278.9 204 71.1
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 5.5e-73 278.5 223 68.2
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 7.2e-73 278.1 240 63.8
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 9.3e-73 277.7 190 75.3
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 2.1e-72 276.6 190 74.2
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 2.7e-72 276.2 206 68.9
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 4.6e-72 275.4 248 62.1
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 7.9e-72 274.6 209 68.4
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 1.3e-71 273.9 232 65.1
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 2.3e-71 273.1 261 60.5
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 2.5e-70 269.6 163 81.6
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 2.5e-70 269.6 197 70.6
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 2.5e-70 269.6 226 65.0
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.6e-69 266.9 240 63.3
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 1.6e-69 266.9 188 69.1
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 2.2e-69 266.5 159 82.4
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 4.8e-69 265.4 240 62.9
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 4.8e-69 265.4 201 68.2
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 6.3e-69 265.0 239 61.9
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.1e-68 264.2 218 64.2
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.8e-68 263.5 245 62.9
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 5.3e-68 261.9 243 60.9
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 5.3e-68 261.9 241 61.8
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 2.6e-67 259.6 237 61.2
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 1.3e-66 257.3 202 66.3
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 2.2e-66 256.5 263 56.7
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 2.2e-66 256.5 237 60.3
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 3.8e-66 255.8 253 58.9
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 6.5e-66 255.0 194 68.0
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 1.4e-65 253.8 231 59.7
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 4.2e-65 252.3 246 58.1
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 5.5e-65 251.9 171 72.5
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 5.5e-65 251.9 234 59.4
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 7.2e-65 251.5 229 61.6
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 9.4e-65 251.1 205 62.9
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.2e-64 250.8 209 65.1
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 1.6e-64 250.4 206 65.5
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.1e-64 250.0 268 53.7
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 2.7e-64 249.6 230 59.6
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 3.6e-64 249.2 268 53.7
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 3.6e-64 249.2 275 52.7
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 7.9e-64 248.1 209 62.2
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 7.9e-64 248.1 259 53.7
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 1.4e-63 247.3 225 59.1
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.4e-63 247.3 204 65.2
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 1.4e-63 247.3 223 63.2
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 2.3e-63 246.5 190 66.8
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 2.3e-63 246.5 230 59.1
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 2.3e-63 246.5 194 64.4
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 2.3e-63 246.5 211 61.6
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 3.9e-63 245.7 230 59.6
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 3.9e-63 245.7 246 56.1
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 3.9e-63 245.7 234 58.1
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 5.1e-63 245.4 211 63.5
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 6.7e-63 245.0 242 56.6
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 8.8e-63 244.6 205 63.4
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 3.3e-62 242.7 242 56.2
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 3.3e-62 242.7 242 56.2
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 5.7e-62 241.9 230 58.3
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 2.2e-61 240.0 223 58.3
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 2.2e-61 240.0 247 57.1
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 4.8e-61 238.8 190 68.9
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 6.3e-61 238.4 169 70.4
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 4.1e-60 235.7 188 62.8
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 5.3e-60 235.3 198 63.1
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 6.9e-60 235.0 165 70.3
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 4.5e-59 232.3 235 54.5
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 4.5e-59 232.3 180 66.7
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 7.7e-59 231.5 195 60.5
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 6.5e-58 228.4 160 69.4
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.1e-57 227.6 211 58.8
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 1.6e-56 223.8 185 63.2
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 4.4e-54 215.7 269 50.6
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.3e-53 214.2 192 61.5
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 4.8e-53 212.2 158 67.7
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 1.4e-52 210.7 251 50.2
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 1.4e-52 210.7 139 73.4
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 4.5e-51 205.7 163 63.8
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 5.2e-47 192.2 185 55.7
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 3.3e-46 189.5 157 61.1
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 3.3e-46 189.5 157 61.1
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 3.5e-43 179.5 156 62.2
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 2.2e-42 176.8 154 58.4
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 2.9e-42 176.4 159 55.3
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 4.7e-40 169.1 207 50.2
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 8.8e-39 164.9 207 49.3
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 5.0e-34 149.1 93 77.4
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 1.1e-33 147.9 158 49.4
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 3.2e-33 146.4 169 46.7
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.8e-31 140.6 82 84.1
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 2.3e-31 140.2 154 58.4
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.0e-30 137.1 229 39.3
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 7.5e-30 135.2 82 80.5
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 2.2e-29 133.7 87 74.7
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 3.5e-27 126.3 117 59.0
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 5.9e-27 125.6 145 49.7
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 8.6e-26 121.7 145 48.3
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 2.5e-25 120.2 150 47.3
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 8.0e-24 115.2 96 62.5
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 1.0e-23 114.8 159 38.4
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 9.8e-22 108.2 69 72.5
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 8.6e-18 95.1 100 50.0
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 3.1e-15 86.7 135 37.8
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 3.2e-12 76.6 79 58.2
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 5.4e-12 75.9 79 49.4
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 1.0e-10 71.6 114 40.4
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 9.5e-09 65.1 83 49.4
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.4e-07 61.2 117 41.0


User provided reference genes

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