Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p040408 Quercus lobata HOM05D020057 ORTHO05D000594 5.6e-193 677.6 372 100.0
QL10p040393 Quercus lobata HOM05D020057 ORTHO05D000594 1.3e-61 241.1 378 47.6
QL10p040279 Quercus lobata HOM05D020057 ORTHO05D000594 3.0e-61 240.0 378 47.4
MD01G1220100 Malus domestica HOM05D000896 ORTHO05D000594 7.0e-10 69.3 157 33.8
Duzib251G0772 Durio zibethinus HOM05D000896 ORTHO05D000594 9.1e-10 68.9 172 32.0
Gohir.A13G066051 Gossypium hirsutum HOM05D015798 ORTHO05D022811 9.1e-10 68.9 151 31.8
COL.COLO4_19258 Corchorus olitorius HOM05D000896 ORTHO05D000594 2.0e-09 67.8 160 28.8
Duzib106G1665 Durio zibethinus HOM05D000896 ORTHO05D000594 3.5e-09 67.0 162 32.7
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 4.5e-09 66.6 167 34.1
Cfa002709 Carpinus fangiana HOM05D000896 ORTHO05D000594 5.9e-09 66.2 293 28.7
Gorai.013G016400 Gossypium raimondii HOM05D015798 ORTHO05D000594 5.9e-09 66.2 167 30.5
Thecc.10G126800 Theobroma cacao HOM05D000896 ORTHO05D000594 7.7e-09 65.9 146 32.2
DCAR_008698 Daucus carota HOM05D000896 ORTHO05D000594 1.0e-08 65.5 159 30.8
Duzib114G1002 Durio zibethinus HOM05D000896 ORTHO05D000594 1.7e-08 64.7 152 30.9
Duzib251G0257 Durio zibethinus HOM05D000896 ORTHO05D000594 1.7e-08 64.7 172 31.4
Duzib114G0938 Durio zibethinus HOM05D000896 ORTHO05D000594 2.2e-08 64.3 145 31.7
Rhsim07G0194000 Rhododendron simsii HOM05D030800 ORTHO05D030536 2.2e-08 64.3 160 33.8
Gohir.D13G014966 Gossypium hirsutum HOM05D015798 ORTHO05D022811 5.0e-08 63.2 167 29.9
Haze_00227 Corylus avellana HOM05D000896 ORTHO05D000594 8.5e-08 62.4 149 33.6
Thecc.10G130500 Theobroma cacao HOM05D000896 ORTHO05D000594 8.5e-08 62.4 146 30.1
Thecc.10G130700 Theobroma cacao HOM05D000896 ORTHO05D000594 8.5e-08 62.4 145 31.0
Gorai.013G062600 Gossypium raimondii HOM05D000896 ORTHO05D000594 1.5e-07 61.6 140 30.7
Nitab4.5_0007441g0030 Nicotiana tabacum HOM05D000896 ORTHO05D000594 1.5e-07 61.6 139 35.3
Atru.chr3.2654 Acer truncatum HOM05D000896 ORTHO05D000594 1.9e-07 61.2 167 29.9
Atru.chr3.2660 Acer truncatum HOM05D000896 ORTHO05D000594 1.9e-07 61.2 167 29.9
Actinidia23084 Actinidia chinensis HOM05D000896 ORTHO05D000594 2.5e-07 60.8 159 30.8
COL.COLO4_02946 Corchorus olitorius HOM05D000896 ORTHO05D000594 2.5e-07 60.8 178 32.6
Rhsim07G0194100 Rhododendron simsii HOM05D030800 ORTHO05D030536 5.5e-07 59.7 193 31.1
Cfa004777 Carpinus fangiana HOM05D000896 ORTHO05D000594 7.2e-07 59.3 141 31.9
Duzib251G0081 Durio zibethinus HOM05D000896 ORTHO05D000594 7.2e-07 59.3 171 30.4
QL11p026956 Quercus lobata HOM05D000896 ORTHO05D000594 7.2e-07 59.3 128 33.6
Actinidia23083 Actinidia chinensis HOM05D000896 ORTHO05D000594 9.4e-07 58.9 153 30.7
QL03p040416 Quercus lobata HOM05D000896 ORTHO05D000594 9.4e-07 58.9 131 32.1
Thecc.03G196900 Theobroma cacao HOM05D000896 ORTHO05D000594 1.2e-06 58.5 136 31.6
Atru.chr3.2653 Acer truncatum HOM05D000874 ORTHO05D001049 2.1e-06 57.8 178 29.2
Atru.chr3.2659 Acer truncatum HOM05D000896 ORTHO05D000594 2.1e-06 57.8 181 29.3
Cfa002712 Carpinus fangiana HOM05D000896 ORTHO05D000594 2.1e-06 57.8 290 28.6
Dinv21550 Davidia involucrata HOM05D000896 ORTHO05D000594 2.1e-06 57.8 148 29.7
Eucgr.I00818 Eucalyptus grandis HOM05D000896 ORTHO05D000594 2.1e-06 57.8 154 30.5
Nitab4.5_0001681g0040 Nicotiana tabacum HOM05D000896 ORTHO05D000594 2.1e-06 57.8 148 31.8
Thecc.10G126400 Theobroma cacao HOM05D000896 ORTHO05D000594 2.1e-06 57.8 146 29.5
arahy.Tifrunner.gnm1.ann1.4P3ANK Arachis hypogaea HOM05D011529 ORTHO05D000594 2.7e-06 57.4 143 30.1
Dinv21551 Davidia involucrata HOM05D000896 ORTHO05D000594 2.7e-06 57.4 148 29.7
Gorai.008G045700 Gossypium raimondii HOM05D000896 ORTHO05D000594 2.7e-06 57.4 133 30.8
Manes.09G155401 Manihot esculenta HOM05D000896 ORTHO05D000594 2.7e-06 57.4 145 31.0
Eucgr.I00861 Eucalyptus grandis HOM05D000896 ORTHO05D000594 3.6e-06 57.0 153 30.7
Gohir.A02G044702 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.6e-06 57.0 192 28.6
Gorai.005G056000 Gossypium raimondii HOM05D000896 ORTHO05D000594 3.6e-06 57.0 194 27.3
Cfa004785 Carpinus fangiana HOM05D000896 ORTHO05D000594 4.7e-06 56.6 142 29.6
Gohir.A12G043480 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.7e-06 56.6 133 30.8
Gohir.A12G043560 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.7e-06 56.6 133 30.8
Gohir.A12G043720 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.7e-06 56.6 133 30.8
Cfa004691 Carpinus fangiana HOM05D000896 ORTHO05D000594 6.1e-06 56.2 147 27.9
CsaV3_4G013340 Cucumis sativus L. HOM05D000896 ORTHO05D000594 6.1e-06 56.2 184 30.4
Actinidia39404 Actinidia chinensis HOM05D000896 ORTHO05D000594 8.0e-06 55.8 149 31.5
Cfa016248 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.0e-06 55.8 141 33.3
Nitab4.5_0001582g0060 Nicotiana tabacum HOM05D000896 ORTHO05D000594 8.0e-06 55.8 148 31.8
QL03p040822 Quercus lobata HOM05D000896 ORTHO05D000594 8.0e-06 55.8 131 31.3


User provided reference genes

Program Settings