Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p040279 Quercus lobata HOM05D020057 ORTHO05D000594 6.0e-252 874.0 543 100.0
QL10p040393 Quercus lobata HOM05D020057 ORTHO05D000594 4.2e-173 612.1 327 99.7
QL08p033793 Quercus lobata HOM05D020057 ORTHO05D000010 1.8e-70 271.2 135 91.9
QL10p040408 Quercus lobata HOM05D020057 ORTHO05D000594 1.8e-62 244.6 378 47.4
QL01p006558 Quercus lobata HOM05D000073 ORTHO05D000033 4.9e-20 103.6 126 46.0
QL03p024623 Quercus lobata HOM05D020057 ORTHO05D009135 3.2e-19 100.9 49 89.8
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 4.3e-16 90.5 134 40.3
QL93p0073_1346 Quercus lobata HOM05D000089 ORTHO05D000104 6.2e-15 86.7 46 84.8
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 4.4e-13 80.5 121 42.1
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 1.1e-11 75.9 46 76.1
QL04p089484 Quercus lobata HOM05D000021 ORTHO05D000010 2.4e-11 74.7 46 76.1
Cfa002709 Carpinus fangiana HOM05D000896 ORTHO05D000594 4.1e-11 73.9 275 26.2
QL10p061732 Quercus lobata HOM05D000041 ORTHO05D000061 5.4e-11 73.6 133 36.1
QL04p050883 Quercus lobata HOM05D000036 ORTHO05D001038 2.1e-10 71.6 45 75.6
Atru.chr3.2654 Acer truncatum HOM05D000896 ORTHO05D000594 3.5e-10 70.9 152 32.9
Atru.chr3.2660 Acer truncatum HOM05D000896 ORTHO05D000594 3.5e-10 70.9 152 32.9
Gohir.A12G043480 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.3e-09 68.9 183 30.6
QL03p040822 Quercus lobata HOM05D000896 ORTHO05D000594 1.3e-09 68.9 144 33.3
Cfa002712 Carpinus fangiana HOM05D000896 ORTHO05D000594 2.3e-09 68.2 275 25.8
QL03p040404 Quercus lobata HOM05D000896 ORTHO05D000594 3.9e-09 67.4 144 33.3
QL03p040416 Quercus lobata HOM05D000896 ORTHO05D000594 5.1e-09 67.0 144 33.3
Gohir.A12G043560 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.6e-09 66.2 183 30.1
Gohir.A12G043720 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.6e-09 66.2 183 30.1
QL03p004772 Quercus lobata HOM05D002930 ORTHO05D003283 8.6e-09 66.2 27 100.0
Gorai.008G045700 Gossypium raimondii HOM05D000896 ORTHO05D000594 1.1e-08 65.9 183 30.1
Gohir.D12G042950 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.5e-08 65.5 177 31.1
TPR.G1144 Trifolium pratense HOM05D000896 ORTHO05D000594 1.5e-08 65.5 210 29.5
TPR.G12242 Trifolium pratense HOM05D000896 ORTHO05D000594 4.3e-08 63.9 154 33.8
Ciclev10030180m.g Citrus clementina HOM05D000896 ORTHO05D000594 5.6e-08 63.5 305 26.9
Gohir.D12G043450 Gossypium hirsutum HOM05D000896 ORTHO05D000594 7.3e-08 63.2 177 30.5
QL02p013635 Quercus lobata HOM05D000219 ORTHO05D338170 1.2e-07 62.4 26 96.2
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 1.6e-07 62.0 172 32.6
Duzib251G0772 Durio zibethinus HOM05D000896 ORTHO05D000594 1.6e-07 62.0 161 30.4
Thecc.03G196900 Theobroma cacao HOM05D000896 ORTHO05D000594 1.6e-07 62.0 162 28.4
QL12p014348 Quercus lobata HOM05D000016 ORTHO05D000538 2.1e-07 61.6 37 75.7
Potri.015G014700 Populus trichocarpa HOM05D000896 ORTHO05D000594 2.8e-07 61.2 309 25.2
SalBow4G2196 Salvia bowleyana HOM05D000896 ORTHO05D000594 2.8e-07 61.2 169 32.0
Dinv21551 Davidia involucrata HOM05D000896 ORTHO05D000594 3.6e-07 60.8 157 28.7
Duzib251G0257 Durio zibethinus HOM05D000896 ORTHO05D000594 3.6e-07 60.8 157 30.6
Rhsim07G0194000 Rhododendron simsii HOM05D030800 ORTHO05D030536 3.6e-07 60.8 157 34.4
Dinv21550 Davidia involucrata HOM05D000896 ORTHO05D000594 6.2e-07 60.1 157 28.7
Duzib114G1002 Durio zibethinus HOM05D000896 ORTHO05D000594 6.2e-07 60.1 160 32.5
Duzib251G0081 Durio zibethinus HOM05D000896 ORTHO05D000594 6.2e-07 60.1 156 31.4
QL03p026378 Quercus lobata HOM05D000896 ORTHO05D000594 6.2e-07 60.1 271 25.5
Gorai.008G045100 Gossypium raimondii HOM05D000896 ORTHO05D000594 8.1e-07 59.7 183 29.5
Rhsim07G0194100 Rhododendron simsii HOM05D030800 ORTHO05D030536 1.4e-06 58.9 158 33.5
Cfa016248 Carpinus fangiana HOM05D000896 ORTHO05D000594 1.8e-06 58.5 160 31.9
PGR119G0007 Punica granatum HOM05D000896 ORTHO05D000594 3.1e-06 57.8 152 28.3
Sabra15G0011700 Salix brachista HOM05D000896 ORTHO05D000594 3.1e-06 57.8 152 28.9
TPR.G1176 Trifolium pratense HOM05D000896 ORTHO05D000594 3.1e-06 57.8 221 26.2
Dinv40965 Davidia involucrata HOM05D000896 ORTHO05D000594 4.0e-06 57.4 158 29.7
Gohir.A13G066051 Gossypium hirsutum HOM05D015798 ORTHO05D022811 4.0e-06 57.4 246 26.8
Gorai.013G062600 Gossypium raimondii HOM05D000896 ORTHO05D000594 4.0e-06 57.4 159 30.8
QL06p020465 Quercus lobata HOM05D001254 ORTHO05D001386 4.0e-06 57.4 128 32.8
QL05p053953 Quercus lobata HOM05D000121 ORTHO05D001726 5.2e-06 57.0 28 78.6
Thecc.03G197000 Theobroma cacao HOM05D000896 ORTHO05D000594 5.2e-06 57.0 258 26.4
Cfa004777 Carpinus fangiana HOM05D000896 ORTHO05D000594 6.8e-06 56.6 158 30.4
arahy.Tifrunner.gnm1.ann1.K5WR0Q Arachis hypogaea HOM05D011529 ORTHO05D000594 8.9e-06 56.2 160 30.0
Duzib106G1665 Durio zibethinus HOM05D000896 ORTHO05D000594 8.9e-06 56.2 159 30.2
Thecc.10G130700 Theobroma cacao HOM05D000896 ORTHO05D000594 8.9e-06 56.2 167 28.7


User provided reference genes

Program Settings