Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p037675 Quercus lobata HOM05D007044 ORTHO05D008981 1.1e-176 623.2 319 100.0
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 4.0e-123 445.3 317 74.4
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 6.0e-119 431.4 317 72.6
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 3.0e-118 429.1 317 73.2
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 4.3e-101 372.1 317 64.7
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 2.9e-97 359.4 317 63.4
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 1.8e-94 350.1 309 61.5
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 5.1e-94 348.6 311 62.1
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 9.6e-93 344.4 317 59.6
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 9.6e-93 344.4 310 62.6
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 1.8e-91 340.1 320 58.8
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 3.1e-91 339.3 317 59.0
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 4.1e-91 339.0 311 61.1
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 5.3e-91 338.6 278 65.1
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 6.9e-91 338.2 318 59.4
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 7.6e-90 334.7 315 61.3
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 2.9e-89 332.8 318 58.8
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 3.8e-89 332.4 318 59.7
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 2.5e-88 329.7 318 58.2
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 2.1e-87 326.6 315 57.1
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 6.7e-86 321.6 313 58.5
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 8.7e-86 321.2 316 57.3
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 4.3e-85 318.9 317 57.7
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 5.7e-85 318.5 314 58.0
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 9.7e-85 317.8 315 57.8
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 2.2e-84 316.6 299 57.2
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.8e-83 313.5 320 55.9
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 5.3e-83 312.0 319 57.1
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 1.2e-82 310.8 312 57.4
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 1.5e-82 310.5 312 54.8
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 1.3e-81 307.4 318 56.3
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 1.3e-81 307.4 294 58.8
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 1.3e-81 307.4 310 58.7
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 5.0e-81 305.4 315 52.4
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 8.5e-81 304.7 310 56.5
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 1.4e-80 303.9 313 57.8
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 1.4e-80 303.9 326 52.5
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 1.9e-80 303.5 310 55.5
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 3.2e-80 302.8 310 55.5
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 3.2e-80 302.8 324 54.6
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 4.2e-80 302.4 336 51.8
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 4.2e-80 302.4 344 50.9
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 4.2e-80 302.4 316 55.4
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 7.2e-80 301.6 329 53.5
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 7.2e-80 301.6 329 53.2
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 1.2e-79 300.8 315 55.2
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 2.7e-79 299.7 310 55.5
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 2.7e-79 299.7 316 54.1
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 3.6e-79 299.3 310 56.1
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 4.6e-79 298.9 255 64.3
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 4.6e-79 298.9 324 52.8
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 6.1e-79 298.5 324 53.1
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 6.1e-79 298.5 315 57.8
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 7.9e-79 298.1 312 56.1
Eucgr.I00024 Eucalyptus grandis HOM05D007044 ORTHO05D008981 3.0e-78 296.2 301 53.2
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 1.1e-77 294.3 310 54.2
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 2.0e-77 293.5 331 52.3
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 2.5e-77 293.1 310 54.2
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 7.4e-77 291.6 315 51.4
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 7.4e-77 291.6 369 48.2
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 1.3e-76 290.8 317 53.9
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 3.7e-76 289.3 301 57.8
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 9.1e-75 284.6 312 53.2
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 5.9e-74 282.0 317 53.3
Glyma.10G176100 Glycine max HOM05D007044 ORTHO05D008981 5.9e-74 282.0 296 55.1
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 1.3e-73 280.8 319 50.5
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 1.3e-73 280.8 307 52.1
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 2.2e-73 280.0 317 52.7
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 3.8e-73 279.3 314 51.9
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 3.2e-72 276.2 339 49.0
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 1.1e-69 267.7 306 51.6
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 2.0e-69 266.9 299 52.8
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 2.6e-69 266.5 313 48.9
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 5.3e-67 258.8 311 49.8
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 1.6e-66 257.3 314 48.7
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 1.9e-64 250.4 319 47.6
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 1.9e-64 250.4 316 48.1
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 1.9e-64 250.4 319 47.6
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 1.9e-64 250.4 291 50.2
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 2.5e-64 250.0 315 49.2
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 4.7e-63 245.7 311 48.9
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 6.1e-63 245.4 242 57.9
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 1.8e-62 243.8 293 49.1
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 5.2e-62 242.3 346 42.2
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 1.3e-60 237.7 319 43.9
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 2.8e-60 236.5 316 46.2
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 2.8e-60 236.5 316 46.2
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 2.2e-57 226.9 320 45.3
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 1.2e-55 221.1 353 41.9
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 5.4e-43 179.1 346 34.7
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 1.8e-38 164.1 290 40.0
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 3.0e-38 163.3 415 33.5
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 4.6e-34 149.4 192 47.4
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 5.0e-33 146.0 253 37.5
MELO3C033209.2 Cucumis melo HOM05D007044 ORTHO05D008981 3.6e-31 139.8 153 58.2
CBR_g30110 Chara braunii HOM05D007044 ORTHO05D008981 3.5e-26 123.2 115 51.3
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 2.8e-07 60.5 117 35.0
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 8.9e-06 55.5 260 25.8


User provided reference genes

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