Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p036801 Quercus lobata HOM05D003493 ORTHO05D003980 4.3e-83 311.6 198 100.0
QL10p035447 Quercus lobata HOM05D003493 ORTHO05D003980 5.3e-73 278.1 180 100.0
CiPaw.16G076700 Carya illinoinensis HOM05D003493 ORTHO05D003980 4.1e-49 198.7 203 59.6
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 1.2e-45 187.2 224 55.8
CiPaw.15G108800 Carya illinoinensis HOM05D003493 ORTHO05D003980 1.6e-45 186.8 202 59.4
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 2.0e-43 179.9 225 56.0
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 1.8e-41 173.3 213 52.6
Cpa.g.sc829.1 Carica papaya HOM05D003493 ORTHO05D003980 3.8e-39 165.6 210 50.5
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 3.8e-39 165.6 212 46.2
Atru.chr9.57 Acer truncatum HOM05D003493 ORTHO05D003980 2.1e-37 159.8 203 45.3
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 3.6e-37 159.1 203 48.8
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 4.7e-37 158.7 209 52.6
Duzib235G1490 Durio zibethinus HOM05D003493 ORTHO05D003980 1.0e-36 157.5 205 49.3
Sabra17G0126700 Salix brachista HOM05D003493 ORTHO05D003980 3.0e-36 156.0 209 44.0
COL.COLO4_22901 Corchorus olitorius HOM05D003493 ORTHO05D003980 6.7e-36 154.8 204 42.6
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 8.8e-36 154.5 211 51.2
FAN13G0815 Fragaria x ananassa HOM05D003493 ORTHO05D003980 1.5e-35 153.7 211 51.2
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 2.0e-35 153.3 206 46.6
FAN04G2252 Fragaria x ananassa HOM05D003493 ORTHO05D003980 4.4e-35 152.1 211 50.7
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 9.7e-35 151.0 211 50.7
Duzib192G0928 Durio zibethinus HOM05D003493 ORTHO05D003980 1.3e-34 150.6 206 49.0
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 1.3e-34 150.6 211 50.7
Manes.01G159600 Manihot esculenta HOM05D003493 ORTHO05D003980 1.1e-33 147.5 204 41.2
GSVIVG01024229001 Vitis vinifera HOM05D003493 ORTHO05D003980 2.4e-33 146.4 205 47.8
Actinidia06838 Actinidia chinensis HOM05D003493 ORTHO05D003980 9.1e-33 144.4 197 45.7
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 1.2e-32 144.1 209 45.9
TWI36G1567 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 2.6e-32 142.9 192 42.7
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.0e-31 141.0 202 43.1
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.0e-31 141.0 202 43.1
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 1.0e-31 141.0 202 43.1
TAR622G0755 Trochodendron aralioides HOM05D003493 ORTHO05D003980 3.8e-31 139.0 218 39.9
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 5.0e-31 138.7 210 48.1
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.1e-30 137.5 202 43.6
Manes.02G118200 Manihot esculenta HOM05D003493 ORTHO05D003980 1.5e-30 137.1 208 41.8
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 9.4e-30 134.4 201 39.8
Sc12g0007780 Simmondsia chinensis HOM05D003493 ORTHO05D003980 9.4e-30 134.4 203 40.4
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 1.2e-29 134.0 200 41.0
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 1.6e-29 133.7 229 41.9
Eucgr.H00671 Eucalyptus grandis HOM05D003493 ORTHO05D003980 2.1e-29 133.3 220 45.0
Aqoxy3G04358 Aquilegia oxysepala HOM05D003493 ORTHO05D003980 3.6e-29 132.5 215 43.7
MELO3C002186.2 Cucumis melo HOM05D003493 ORTHO05D003980 3.6e-29 132.5 213 46.5
CsaV3_1G007680 Cucumis sativus L. HOM05D003493 ORTHO05D003980 2.3e-28 129.8 213 45.1
ClCG01G014650 Citrullus lanatus HOM05D003493 ORTHO05D003980 3.0e-28 129.4 213 44.6
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 5.2e-28 128.6 223 43.0
Lj5A169T97 Lonicera japonica HOM05D003493 ORTHO05D003980 6.7e-28 128.3 205 39.5
Potri.018G152400 Populus trichocarpa HOM05D003493 ORTHO05D003980 6.7e-28 128.3 207 40.1
Oeu034418.1 Olea europaea HOM05D003493 ORTHO05D003980 2.0e-27 126.7 204 41.2
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 3.3e-27 125.9 197 44.7
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 4.4e-27 125.6 223 42.6
Nn3g18516 Nelumbo nucifera HOM05D003493 ORTHO05D003980 5.7e-27 125.2 220 43.6
Sed0011518 Sechium edule HOM05D003493 ORTHO05D003980 9.7e-27 124.4 196 40.3
MBI06_g37980_MAGBIO Magnolia biondii HOM05D003493 ORTHO05D003980 2.8e-26 122.9 217 41.9
Lj9A410T67 Lonicera japonica HOM05D003493 ORTHO05D003980 3.7e-26 122.5 205 38.5
Lj5g0000329 Lotus japonicus HOM05D003493 ORTHO05D003980 3.7e-26 122.5 229 41.0
Cc04_g13620 Coffea canephora HOM05D003493 ORTHO05D003980 6.3e-26 121.7 206 37.4
Lalb_Chr14g0370061 Lupinus albus HOM05D003493 ORTHO05D003980 1.8e-25 120.2 211 38.4
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 3.1e-25 119.4 237 38.4
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 5.3e-25 118.6 214 43.5
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 9.1e-25 117.9 230 37.8
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 2.0e-24 116.7 237 35.0
PSO063G3260 Papaver somniferum HOM05D003493 ORTHO05D003980 2.7e-24 116.3 222 40.1
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 2.7e-24 116.3 228 43.0
C05p16200 Brassica napus HOM05D003493 ORTHO05D003980 3.5e-24 115.9 208 37.5
Carub.0001s1755 Capsella rubella HOM05D003493 ORTHO05D003980 5.9e-24 115.2 227 44.5
AUR62041605 Chenopodium quinoa HOM05D003493 ORTHO05D003980 1.3e-23 114.0 203 40.4
TPR.G8876 Trifolium pratense HOM05D003493 ORTHO05D003980 1.7e-23 113.6 228 38.2
Carub.0002s1999 Capsella rubella HOM05D003493 ORTHO05D003980 2.2e-23 113.2 210 38.6
DCAR_011395 Daucus carota HOM05D003493 ORTHO05D003980 2.9e-23 112.8 223 35.4
CARHR066210 Cardamine hirsuta HOM05D003493 ORTHO05D003980 3.8e-23 112.5 210 38.1
AUR62040635 Chenopodium quinoa HOM05D003493 ORTHO05D003980 3.8e-23 112.5 203 40.4
Thhalv10006829m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 5.0e-23 112.1 231 37.2
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 5.0e-23 112.1 208 34.1
PSO782G2561 Papaver somniferum HOM05D003493 ORTHO05D003980 1.1e-22 110.9 222 38.7
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.5e-22 110.5 207 34.8
MSTRG.23219 Avicennia marina HOM05D003493 ORTHO05D003980 1.9e-22 110.2 208 36.5
SalBow5G1620 Salvia bowleyana HOM05D003493 ORTHO05D003980 1.9e-22 110.2 211 36.0
Sp1g15900 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.9e-22 110.2 238 36.1
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 2.5e-22 109.8 232 32.3
AL1G30180 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 4.2e-22 109.0 239 33.9
AT1G73200 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 4.2e-22 109.0 209 36.8
A06p13880 Brassica napus HOM05D003493 ORTHO05D003980 4.2e-22 109.0 225 38.7
BraA06t24529Z Brassica rapa HOM05D003493 ORTHO05D003980 4.2e-22 109.0 225 38.7
Sopen06g028400 Solanum pennellii HOM05D003493 ORTHO05D003980 5.5e-22 108.6 248 33.5
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 7.2e-22 108.2 249 32.1
AL2G32970 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 9.4e-22 107.8 209 34.9
Solyc06g072110.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 9.4e-22 107.8 248 33.1
Lalb_Chr06g0168711 Lupinus albus HOM05D003493 ORTHO05D003980 1.6e-21 107.1 219 37.0
Aa31LG7G2640 Aethionema arabicum HOM05D003493 ORTHO05D003980 2.1e-21 106.7 200 35.0
PGSC0003DMG400027062 Solanum tuberosum HOM05D003493 ORTHO05D003980 2.1e-21 106.7 249 32.5
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 3.6e-21 105.9 205 34.6
TPR.G8860 Trifolium pratense HOM05D003493 ORTHO05D003980 3.6e-21 105.9 213 34.7
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 8.0e-21 104.8 209 38.3
BolC5t30322H Brassica oleracea HOM05D003493 ORTHO05D003980 8.0e-21 104.8 227 39.2
AT1G17820 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 1.0e-20 104.4 242 37.6
A09p60190 Brassica napus HOM05D003493 ORTHO05D003980 1.0e-20 104.4 239 41.0
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 1.0e-20 104.4 204 34.3
Nitab4.5_0000477g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 1.0e-20 104.4 249 31.7
BraA09t41388Z Brassica rapa HOM05D003493 ORTHO05D003980 1.4e-20 104.0 239 41.8
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 2.3e-20 103.2 247 31.2
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 2.3e-20 103.2 224 36.2
EL10Ac8g19467 Beta vulgaris HOM05D003493 ORTHO05D003980 5.2e-20 102.1 191 35.6
C08p43630 Brassica napus HOM05D003493 ORTHO05D003980 5.2e-20 102.1 239 40.2
BolC8t51909H Brassica oleracea HOM05D003493 ORTHO05D003980 5.2e-20 102.1 239 40.2
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 5.2e-20 102.1 204 36.3
Glyma.09G160200 Glycine max HOM05D003493 ORTHO05D003980 5.2e-20 102.1 211 34.1
BcaC07g41354 Brassica carinata HOM05D003493 ORTHO05D003980 6.8e-20 101.7 239 40.2
Migut.O00291 Erythranthe guttata HOM05D003493 ORTHO05D003980 8.8e-20 101.3 218 33.5
Lj2g0009881 Lotus japonicus HOM05D003493 ORTHO05D003980 8.8e-20 101.3 205 36.1
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 8.8e-20 101.3 253 32.4
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 8.8e-20 101.3 236 33.1
Ca_25303_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 1.2e-19 100.9 202 42.1
SGA_v2.0_scaffold25G10715 Striga asiatica HOM05D003493 ORTHO05D003980 1.5e-19 100.5 218 34.9
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 3.4e-19 99.4 194 35.1
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 4.4e-19 99.0 205 35.6
CARHR018430 Cardamine hirsuta HOM05D003493 ORTHO05D003980 4.4e-19 99.0 235 39.6
BcaB07g34006 Brassica carinata HOM05D003493 ORTHO05D003980 2.2e-18 96.7 209 41.6
BcaNung05482 Brassica carinata HOM05D003493 ORTHO05D003980 2.2e-18 96.7 216 39.8
Sopen03g029860 Solanum pennellii HOM05D003493 ORTHO05D003980 3.7e-18 95.9 223 35.9
Zm00001eb190790 Zea mays HOM05D003493 ORTHO05D003980 4.8e-18 95.5 190 35.3
Lalb_Chr21g0311711 Lupinus albus HOM05D003493 ORTHO05D003980 1.8e-17 93.6 151 40.4
PGR083G2526 Punica granatum HOM05D003493 ORTHO05D003980 4.1e-17 92.4 219 39.3
Hund06742 Selenicereus undatus HOM05D003493 ORTHO05D001641 4.1e-17 92.4 188 35.1
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 7.0e-17 91.7 191 34.0
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 7.0e-17 91.7 191 34.0
Os02g0827500 Oryza sativa ssp. japonica HOM05D003493 ORTHO05D003980 1.2e-16 90.9 204 34.8
Gohir.A06G181400 Gossypium hirsutum HOM05D003493 ORTHO05D003980 4.5e-16 89.0 191 34.0
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea HOM05D003493 ORTHO05D003980 5.9e-16 88.6 218 28.4
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 5.9e-16 88.6 194 33.5
Nitab4.5_0003367g0050 Nicotiana tabacum HOM05D003493 ORTHO05D003980 5.9e-16 88.6 220 32.7
Medtr6g066300 Medicago truncatula HOM05D003493 ORTHO05D003980 1.3e-15 87.4 202 31.7
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 1.7e-15 87.0 215 33.0
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea HOM05D003493 ORTHO05D003980 2.9e-15 86.3 220 29.1
VMungo0464G0665 Vigna mungo HOM05D003493 ORTHO05D003980 6.5e-15 85.1 200 35.0
Psat1g117720 Pisum sativum HOM05D003493 ORTHO05D003980 8.5e-15 84.7 195 30.8
HanXRQChr15g0492171 Helianthus annuus HOM05D003493 ORTHO05D003980 1.1e-14 84.3 211 41.7
CAN.G861.8 Capsicum annuum HOM05D003493 ORTHO05D003980 1.6e-13 80.5 213 33.8
CDE07G1702 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.6e-13 80.5 238 27.3
Phvul.004G135600 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 1.8e-12 77.0 192 31.8
Solyc03g019770.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 1.8e-12 77.0 223 33.6
Aa31LG4G3480 Aethionema arabicum HOM05D003493 ORTHO05D003980 4.0e-12 75.9 149 32.9
Ca_09923_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 5.2e-12 75.5 74 48.6
Ca_25290_v3 Cicer arietinum L. HOM05D003493 ORTHO05D015411 8.8e-12 74.7 43 69.8
Zm00001eb228970 Zea mays HOM05D003493 ORTHO05D003980 1.5e-11 73.9 191 31.4
ECA232G4824 Erigeron canadensis HOM05D003493 ORTHO05D003980 1.7e-10 70.5 64 51.6
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 1.4e-09 67.4 230 32.2
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 1.8e-09 67.0 182 31.3
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 1.8e-09 67.0 39 69.2
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis HOM05D003493 ORTHO05D003980 1.2e-08 64.3 201 28.4
BcaC07g41355 Brassica carinata HOM05D003493 ORTHO05D003980 5.9e-08 62.0 114 41.2
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 1.3e-07 60.8 49 49.0
CDE04G1302 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 6.6e-07 58.5 243 29.2


User provided reference genes

Program Settings