Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 2.4e-218 761.9 390 100.0
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 4.9e-163 578.2 423 77.1
QL08p010601 Quercus lobata HOM05D003876 ORTHO05D004560 1.7e-35 154.5 127 72.4
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 2.2e-22 110.9 269 34.9
QL08p010959 Quercus lobata HOM05D003876 ORTHO05D004560 4.1e-21 106.7 379 31.9
QL08p010650 Quercus lobata HOM05D003876 ORTHO05D004560 1.6e-20 104.8 54 92.6
QL10p036338 Quercus lobata HOM05D003876 ORTHO05D004560 1.6e-20 104.8 54 92.6
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 1.0e-19 102.1 266 33.8
QL08p010686 Quercus lobata HOM05D003876 ORTHO05D004560 2.3e-19 100.9 64 76.6
QL08p010874 Quercus lobata HOM05D003876 ORTHO05D004560 2.3e-19 100.9 54 87.0
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 8.6e-19 99.0 258 34.5
QL08p010925 Quercus lobata HOM05D003876 ORTHO05D004560 1.1e-18 98.6 54 85.2
QL08p011039 Quercus lobata HOM05D003876 ORTHO05D004560 5.6e-18 96.3 80 66.2
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 2.3e-16 90.9 263 32.7
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 3.1e-16 90.5 231 30.7
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 3.4e-15 87.0 263 29.7
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 1.1e-13 82.0 203 34.0
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 7.1e-13 79.3 265 27.9
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 2.1e-12 77.8 264 28.8
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 3.5e-12 77.0 265 27.5
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 4.6e-12 76.6 267 27.7
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 6.0e-12 76.3 251 28.7
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 1.3e-11 75.1 258 27.5
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 3.0e-11 73.9 108 44.4
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 3.0e-11 73.9 108 44.4
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 3.0e-11 73.9 90 50.0
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 3.0e-11 73.9 75 53.3
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 3.0e-11 73.9 94 47.9
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 3.9e-11 73.6 168 36.3
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 3.9e-11 73.6 79 51.9
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 5.1e-11 73.2 251 27.9
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 5.1e-11 73.2 91 46.2
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 8.6e-11 72.4 127 42.5
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 1.5e-10 71.6 90 53.3
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 1.5e-10 71.6 263 28.5
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 1.5e-10 71.6 79 53.2
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 2.5e-10 70.9 79 51.9
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 3.3e-10 70.5 90 51.1
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 4.3e-10 70.1 79 50.6
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 4.3e-10 70.1 79 51.9
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 5.6e-10 69.7 79 49.4
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 7.3e-10 69.3 102 43.1
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 7.3e-10 69.3 102 43.1
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 9.6e-10 68.9 90 51.1
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 1.2e-09 68.6 55 61.8
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.2e-09 68.6 165 37.6
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.2e-09 68.6 165 37.6
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 1.2e-09 68.6 79 49.4
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 1.2e-09 68.6 70 57.1
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 1.2e-09 68.6 82 50.0
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.6e-09 68.2 79 48.1
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 1.6e-09 68.2 69 56.5
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 1.6e-09 68.2 158 36.1
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.6e-09 68.2 102 46.1
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 2.1e-09 67.8 81 53.1
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 3.6e-09 67.0 79 48.1
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 3.6e-09 67.0 91 45.1
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 3.6e-09 67.0 83 51.8
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 3.6e-09 67.0 74 51.4
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 3.6e-09 67.0 67 56.7
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 4.7e-09 66.6 104 43.3
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 6.2e-09 66.2 79 46.8
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.1e-08 65.5 87 49.4
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 1.4e-08 65.1 74 48.6
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 1.8e-08 64.7 71 52.1
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 2.4e-08 64.3 54 61.1
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 2.4e-08 64.3 81 50.6
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 3.1e-08 63.9 263 25.5
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 4.0e-08 63.5 79 44.3
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 6.9e-08 62.8 97 43.3
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 6.9e-08 62.8 97 42.3
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 6.9e-08 62.8 70 48.6
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 8.9e-08 62.4 74 50.0
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 8.9e-08 62.4 158 34.2
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 1.2e-07 62.0 80 47.5
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 1.2e-07 62.0 87 47.1
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 1.5e-07 61.6 143 35.0
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 2.0e-07 61.2 85 43.5
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 2.6e-07 60.8 87 47.1
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 4.4e-07 60.1 66 47.0
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 4.4e-07 60.1 99 36.4
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 4.4e-07 60.1 71 53.5
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 5.8e-07 59.7 68 51.5
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 9.9e-07 58.9 85 42.4
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 9.9e-07 58.9 158 35.4
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 1.3e-06 58.5 105 39.0
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 1.7e-06 58.2 75 48.0
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 2.9e-06 57.4 51 58.8
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 2.9e-06 57.4 70 51.4
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 4.9e-06 56.6 55 52.7
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 4.9e-06 56.6 83 44.6
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 4.9e-06 56.6 67 52.2
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 6.4e-06 56.2 52 51.9
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 6.4e-06 56.2 52 51.9


User provided reference genes

Program Settings