Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p034588 Quercus lobata HOM05D000252 ORTHO05D003750 1.5e-55 219.2 105 100.0
CiPaw.16G072200 Carya illinoinensis HOM05D000252 ORTHO05D003750 9.7e-42 173.3 83 94.0
Cfa017789 Carpinus fangiana HOM05D000252 ORTHO05D003750 8.2e-41 170.2 84 90.5
Prupe.5G242400 Prunus persica HOM05D000252 ORTHO05D003750 8.2e-41 170.2 92 82.6
Gohir.A07G121550 Gossypium hirsutum HOM05D000252 ORTHO05D003750 1.4e-40 169.5 97 81.4
Gohir.D07G125900 Gossypium hirsutum HOM05D000252 ORTHO05D003750 1.4e-40 169.5 90 84.4
Oeu034435.1 Olea europaea HOM05D000252 ORTHO05D003750 1.8e-40 169.1 91 83.5
Gorai.001G135800 Gossypium raimondii HOM05D000252 ORTHO05D003750 2.4e-40 168.7 85 88.2
Lj5C167G0 Lonicera japonica HOM05D000252 ORTHO05D003750 2.4e-40 168.7 87 85.1
Thecc.03G072500 Theobroma cacao HOM05D000252 ORTHO05D003750 3.1e-40 168.3 90 82.2
Eucgr.I02747 Eucalyptus grandis HOM05D000252 ORTHO05D003750 5.3e-40 167.5 85 85.9
CSS0037678 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D003750 1.5e-39 166.0 92 79.3
MELO3C001948.2 Cucumis melo HOM05D000252 ORTHO05D003750 1.5e-39 166.0 89 83.1
CsaV3_1G005100 Cucumis sativus L. HOM05D000252 ORTHO05D003750 1.5e-39 166.0 89 83.1
EL10Ac1g01582 Beta vulgaris HOM05D000252 ORTHO05D003750 2.0e-39 165.6 92 79.3
Duzib205G1277 Durio zibethinus HOM05D000252 ORTHO05D003750 2.0e-39 165.6 90 81.1
Haze_18426 Corylus avellana HOM05D000252 ORTHO05D003750 2.6e-39 165.2 83 89.2
Glyma.16G216200 Glycine max HOM05D000252 ORTHO05D003750 3.4e-39 164.9 91 78.0
Actinidia18874 Actinidia chinensis HOM05D000252 ORTHO05D003750 5.9e-39 164.1 86 82.6
Sed0008072 Sechium edule HOM05D000252 ORTHO05D003750 5.9e-39 164.1 89 82.0
TWI15G0890 Tripterygium wilfordii HOM05D000252 ORTHO05D003750 5.9e-39 164.1 88 81.8
Cpa.g.sc111.29 Carica papaya HOM05D000252 ORTHO05D003750 1.3e-38 162.9 83 85.5
Potri.015G028900 Populus trichocarpa HOM05D000252 ORTHO05D003750 1.3e-38 162.9 86 79.1
Oeu016048.1 Olea europaea HOM05D000252 ORTHO05D003750 1.7e-38 162.5 89 80.9
ClCG04G012600 Citrullus lanatus HOM05D000252 ORTHO05D003750 2.2e-38 162.2 89 80.9
VMungo0464G0299 Vigna mungo HOM05D000252 ORTHO05D003750 2.9e-38 161.8 91 75.8
Ciclev10020565m.g Citrus clementina HOM05D000252 ORTHO05D003750 5.0e-38 161.0 85 81.2
TWI81G0629 Tripterygium wilfordii HOM05D000252 ORTHO05D003750 5.0e-38 161.0 88 79.5
AUR62042162 Chenopodium quinoa HOM05D000252 ORTHO05D003750 6.5e-38 160.6 91 78.0
Manes.16G063200 Manihot esculenta HOM05D000252 ORTHO05D003750 6.5e-38 160.6 91 74.7
Rhsim12G0136800 Rhododendron simsii HOM05D000252 ORTHO05D003750 6.5e-38 160.6 83 86.7
GSVIVG01008620001 Vitis vinifera HOM05D000252 ORTHO05D003750 6.5e-38 160.6 85 82.4
Sabra15G0024000 Salix brachista HOM05D000252 ORTHO05D003750 8.5e-38 160.2 86 77.9
Atru.chr9.356 Acer truncatum HOM05D000252 ORTHO05D003750 1.1e-37 159.8 91 75.8
AUR62022404 Chenopodium quinoa HOM05D000252 ORTHO05D003750 1.1e-37 159.8 86 81.4
Phvul.004G141700 Phaseolus vulgaris HOM05D000252 ORTHO05D003750 1.4e-37 159.5 91 74.7
MD06G1238500 Malus domestica HOM05D000252 ORTHO05D003750 1.9e-37 159.1 89 79.8
RcHm_v2.0_Chr6g0266921 Rosa chinensis HOM05D000252 ORTHO05D003750 1.9e-37 159.1 89 79.8
THA.LOC104799962 Tarenaya hassleriana HOM05D000252 ORTHO05D003750 2.5e-37 158.7 88 78.4
TPR.G24058 Trifolium pratense HOM05D000252 ORTHO05D003750 2.5e-37 158.7 86 79.1
Solyc03g098460.3 Solanum lycopersicum HOM05D000252 ORTHO05D003750 3.2e-37 158.3 83 83.1
PGSC0003DMG400010157 Solanum tuberosum HOM05D000252 ORTHO05D003750 3.2e-37 158.3 83 83.1
CAN.G929.31 Capsicum annuum HOM05D000252 ORTHO05D003750 4.2e-37 157.9 83 83.1
Lalb_Chr24g0398501 Lupinus albus HOM05D000252 ORTHO05D003750 4.2e-37 157.9 85 80.0
vmacro16393 Vaccinium macrocarpon HOM05D000252 ORTHO05D003750 4.2e-37 157.9 83 84.3
Cc04_g08590 Coffea canephora HOM05D000252 ORTHO05D003750 5.5e-37 157.5 91 74.7
ECA232G1736 Erigeron canadensis HOM05D000252 ORTHO05D003750 7.2e-37 157.1 89 77.5
MD14G1244800 Malus domestica HOM05D000252 ORTHO05D003750 7.2e-37 157.1 89 79.8
Ah.14g085740 Amaranthus hybridus HOM05D000252 ORTHO05D003750 9.4e-37 156.8 92 76.1
FvH4_5g31670 Fragaria vesca HOM05D000252 ORTHO05D003750 9.4e-37 156.8 88 79.5
FAN18G0687 Fragaria x ananassa HOM05D000252 ORTHO05D003750 9.4e-37 156.8 88 79.5
Sopen03g029200 Solanum pennellii HOM05D000252 ORTHO05D003750 9.4e-37 156.8 83 81.9
Gohir.D04G187600 Gossypium hirsutum HOM05D000252 ORTHO05D003750 1.2e-36 156.4 91 75.8
Gorai.012G180800 Gossypium raimondii HOM05D000252 ORTHO05D003750 1.2e-36 156.4 91 75.8
Lj2g0009530 Lotus japonicus HOM05D000252 ORTHO05D003750 1.6e-36 156.0 86 80.2
FAN04G2881 Fragaria x ananassa HOM05D000252 ORTHO05D003750 2.1e-36 155.6 83 83.1
HanXRQChr17g0545691 Helianthus annuus HOM05D000252 ORTHO05D003750 2.1e-36 155.6 89 76.4
Nn8g40351 Nelumbo nucifera HOM05D000252 ORTHO05D003750 2.1e-36 155.6 91 76.9
Glyma.09G166100 Glycine max HOM05D000252 ORTHO05D003750 2.7e-36 155.2 87 77.0
arahy.Tifrunner.gnm1.ann1.KRCN8E Arachis hypogaea HOM05D000252 ORTHO05D003750 4.7e-36 154.5 86 76.7
Peaxi162Scf00171g00341 Petunia axillaris HOM05D000252 ORTHO05D003750 4.7e-36 154.5 83 80.7
Lsat_1_v5_gn_0_10320 Lactuca sativa HOM05D000252 ORTHO05D003750 6.1e-36 154.1 85 77.6
PGR142G1142 Punica granatum HOM05D000252 ORTHO05D003750 7.9e-36 153.7 88 76.1
Lalb_Chr14g0370331 Lupinus albus HOM05D000252 ORTHO05D003750 1.0e-35 153.3 82 78.0
Nitab4.5_0004612g0050 Nicotiana tabacum HOM05D000252 ORTHO05D003750 1.0e-35 153.3 83 79.5
arahy.Tifrunner.gnm1.ann1.GR2Q8K Arachis hypogaea HOM05D000252 ORTHO05D003750 1.8e-35 152.5 83 78.3
Medtr6g081020 Medicago truncatula HOM05D000252 ORTHO05D003750 1.8e-35 152.5 86 77.9
Nitab4.5_0000782g0210 Nicotiana tabacum HOM05D000252 ORTHO05D003750 2.3e-35 152.1 83 78.3
Aa31LG3G2830 Aethionema arabicum HOM05D000252 ORTHO05D003750 3.9e-35 151.4 87 75.9
Aqoxy3G04245 Aquilegia oxysepala HOM05D000252 ORTHO05D003750 8.8e-35 150.2 86 76.7
CANSAT78G0333 Cannabis sativa HOM05D000252 ORTHO05D003750 1.1e-34 149.8 91 69.2
THA.LOC104811907 Tarenaya hassleriana HOM05D000252 ORTHO05D003750 4.4e-34 147.9 86 74.4
Migut.D02061 Erythranthe guttata HOM05D000252 ORTHO05D003750 7.4e-34 147.1 89 71.9
Sp7g25730 Schrenkiella parvula HOM05D000252 ORTHO05D003750 7.4e-34 147.1 90 71.1
SGA_v2.0_scaffold164G38108 Striga asiatica HOM05D000252 ORTHO05D003750 7.4e-34 147.1 89 70.8
A01p19220 Brassica napus HOM05D000252 ORTHO05D003750 9.7e-34 146.7 90 72.2
BraA01t01864Z Brassica rapa HOM05D000252 ORTHO05D003750 9.7e-34 146.7 90 72.2
ATR0568G038 Amborella trichopoda HOM05D000252 ORTHO05D003750 1.3e-33 146.4 83 77.1
MSTRG.9711 Avicennia marina HOM05D000252 ORTHO05D003750 1.3e-33 146.4 86 69.8
CAN.G1635.19 Capsicum annuum HOM05D000252 ORTHO05D003750 1.3e-33 146.4 78 82.1
TAR629G1058 Trochodendron aralioides HOM05D000252 ORTHO05D003750 1.3e-33 146.4 88 73.9
CARHR235490 Cardamine hirsuta HOM05D000252 ORTHO05D003750 2.2e-33 145.6 89 70.8
AL7G24890 Arabidopsis lyrata HOM05D000252 ORTHO05D003750 2.8e-33 145.2 90 71.1
BcaC06g32666 Brassica carinata HOM05D000252 ORTHO05D003750 2.8e-33 145.2 90 71.1
Carub.0007s1305 Capsella rubella HOM05D000252 ORTHO05D003750 2.8e-33 145.2 90 71.1
FAN08G1937 Fragaria x ananassa HOM05D000252 ORTHO05D003750 2.8e-33 145.2 84 78.6
BcaNung01622 Brassica carinata HOM05D000252 ORTHO05D003750 6.3e-33 144.1 90 71.1
C07p55690 Brassica napus HOM05D000252 ORTHO05D003750 6.3e-33 144.1 91 69.2
Thhalv10025479m.g Eutrema salsugineum HOM05D000252 ORTHO05D003750 6.3e-33 144.1 90 71.1
AT4G27760 Arabidopsis thaliana HOM05D000252 ORTHO05D003750 8.2e-33 143.7 90 70.0
MBI06_g12841_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D003750 8.2e-33 143.7 88 73.9
BcaC09g50539 Brassica carinata HOM05D000252 ORTHO05D003750 1.4e-32 142.9 90 71.1
C01p24150 Brassica napus HOM05D000252 ORTHO05D003750 1.4e-32 142.9 90 71.1
BolC1t02372H Brassica oleracea HOM05D000252 ORTHO05D003750 1.4e-32 142.9 90 71.1
SGA_v2.0_scaffold335G49119 Striga asiatica HOM05D004919 ORTHO05D003750 1.4e-32 142.9 89 68.5
SalBow8G5481 Salvia bowleyana HOM05D000252 ORTHO05D003750 1.8e-32 142.5 89 70.8
BolC7t46050H Brassica oleracea HOM05D000252 ORTHO05D003750 2.4e-32 142.1 91 69.2
DCAR_023253 Daucus carota HOM05D000252 ORTHO05D003750 4.1e-32 141.4 85 68.2
Zm00001eb209490 Zea mays HOM05D000252 ORTHO05D003750 7.0e-32 140.6 85 75.3
Os02g0116500 Oryza sativa ssp. japonica HOM05D000252 ORTHO05D003750 9.1e-32 140.2 86 70.9
Dinv23287 Davidia involucrata HOM05D000252 ORTHO05D003750 1.0e-30 136.7 81 74.1
Zm00001eb229940 Zea mays HOM05D000252 ORTHO05D003750 2.2e-30 135.6 88 68.2
Potri.003G182000 Populus trichocarpa HOM05D000252 ORTHO05D003750 2.9e-30 135.2 87 64.4
PSO782G5092 Papaver somniferum HOM05D000252 ORTHO05D003750 3.8e-30 134.8 91 64.8
Aa31LG3G9380 Aethionema arabicum HOM05D000252 ORTHO05D003750 6.5e-30 134.0 91 64.8
CARHR266110 Cardamine hirsuta HOM05D000252 ORTHO05D003750 6.5e-30 134.0 91 63.7
Sabra03G0132900 Salix brachista HOM05D000252 ORTHO05D003750 6.5e-30 134.0 87 64.4
PSO063G3479 Papaver somniferum HOM05D000252 ORTHO05D003750 1.9e-29 132.5 91 63.7
AL8G27720 Arabidopsis lyrata HOM05D000252 ORTHO05D003750 3.2e-29 131.7 91 62.6
AT5G53090 Arabidopsis thaliana HOM05D000252 ORTHO05D003750 4.2e-29 131.3 91 62.6
Thhalv10013852m.g Eutrema salsugineum HOM05D000252 ORTHO05D003750 7.2e-29 130.6 88 63.6
unitig_0.g29 Utricularia gibba HOM05D002770 ORTHO05D003750 1.2e-28 129.8 83 68.7
MSTRG.4321 Avicennia marina HOM05D000252 ORTHO05D003750 1.6e-28 129.4 80 66.2
Sp6g15260 Schrenkiella parvula HOM05D000252 ORTHO05D003750 2.1e-28 129.0 91 60.4
Carub.0008s1329 Capsella rubella HOM05D000252 ORTHO05D003750 2.7e-28 128.6 91 58.2
BraA03t10830Z Brassica rapa HOM05D000252 ORTHO05D003750 4.7e-28 127.9 89 65.2
Sabra01G0031000 Salix brachista HOM05D000252 ORTHO05D003750 1.4e-27 126.3 87 62.1
CDE04G1927 Ceratophyllum demersum HOM05D000252 ORTHO05D003750 2.3e-27 125.6 85 62.4
BcaB05g22008 Brassica carinata HOM05D000252 ORTHO05D003750 3.0e-27 125.2 91 59.3
BcaB05g22011 Brassica carinata HOM05D000252 ORTHO05D003750 3.0e-27 125.2 91 59.3
BcaC03g14457 Brassica carinata HOM05D000252 ORTHO05D003750 3.0e-27 125.2 91 59.3
C02p18680 Brassica napus HOM05D000252 ORTHO05D003750 3.0e-27 125.2 91 59.3
Peaxi162Scf00835g00014 Petunia axillaris HOM05D000252 ORTHO05D003750 5.2e-27 124.4 83 63.9
Thhalv10013865m.g Eutrema salsugineum HOM05D000252 ORTHO05D003750 6.7e-27 124.0 88 62.5
Aa31LG3G9370 Aethionema arabicum HOM05D000252 ORTHO05D003750 1.5e-26 122.9 84 65.5
A02p11300 Brassica napus HOM05D000252 ORTHO05D003750 2.0e-26 122.5 91 57.1
BolC3t14203H Brassica oleracea HOM05D000223 ORTHO05D003750 2.0e-26 122.5 92 59.8
CSS0000957 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D003750 2.0e-26 122.5 89 64.0
Rhsim08G0206000 Rhododendron simsii HOM05D000252 ORTHO05D003750 2.6e-26 122.1 83 63.9
BcaC01g06222 Brassica carinata HOM05D000223 ORTHO05D003750 9.7e-26 120.2 92 58.7
C03p17970 Brassica napus HOM05D000223 ORTHO05D003750 9.7e-26 120.2 92 58.7
A03p15370 Brassica napus HOM05D000223 ORTHO05D003750 1.3e-25 119.8 86 62.8
SEGI_23143 Sequoiadendron giganteum HOM05D000252 ORTHO05D003750 1.7e-25 119.4 83 61.4
Cc04_g05070 Coffea canephora HOM05D000252 ORTHO05D003750 1.1e-24 116.7 102 52.9
vmacro19054 Vaccinium macrocarpon HOM05D000252 ORTHO05D003750 1.8e-24 115.9 80 60.0
AL8G27730 Arabidopsis lyrata HOM05D000252 ORTHO05D003750 4.1e-24 114.8 89 55.1
BraA02t06192Z Brassica rapa HOM05D000252 ORTHO05D003750 7.0e-24 114.0 84 57.1
BolC2t08013H Brassica oleracea HOM05D000252 ORTHO05D003750 9.1e-24 113.6 83 59.0
Rhsim08G0206100 Rhododendron simsii HOM05D000252 ORTHO05D003750 1.6e-23 112.8 96 51.0
CAN.G47.8 Capsicum annuum HOM05D000252 ORTHO05D003750 2.0e-23 112.5 84 58.3
Nitab4.5_0001271g0050 Nicotiana tabacum HOM05D000252 ORTHO05D003750 4.5e-23 111.3 72 66.7
CARHR266120 Cardamine hirsuta HOM05D000252 ORTHO05D003750 1.7e-22 109.4 89 55.1
AT5G53100 Arabidopsis thaliana HOM05D000252 ORTHO05D003750 2.9e-22 108.6 88 58.0
Actinidia25482 Actinidia chinensis HOM05D000252 ORTHO05D003750 1.9e-21 105.9 84 58.3
Solyc12g042640.1 Solanum lycopersicum HOM05D000252 ORTHO05D003750 1.2e-20 103.2 84 52.4
Sopen12g021790 Solanum pennellii HOM05D000252 ORTHO05D003750 2.1e-20 102.4 84 52.4
PGSC0003DMG400028647 Solanum tuberosum HOM05D000252 ORTHO05D003750 8.0e-20 100.5 84 54.8
HanXRQChr07g0200641 Helianthus annuus HOM05D000252 ORTHO05D003750 2.6e-18 95.5 87 46.0
Carub.0008s1330 Capsella rubella HOM05D000252 ORTHO05D003750 2.8e-17 92.0 90 51.1
RcHm_v2.0_Chr7g0227461 Rosa chinensis HOM05D000252 ORTHO05D003750 1.4e-16 89.7 55 70.9
SHI19115 Sapria himalayana HOM05D000252 ORTHO05D003750 3.2e-13 78.6 78 48.7
SMO164G0127 Selaginella moellendorffii HOM05D000252 ORTHO05D003750 1.6e-12 76.3 75 42.7
Mapoly0054s0023 Marchantia polymorpha HOM05D000252 ORTHO05D003750 1.8e-11 72.8 94 37.2
AagrBONN_evm.TU.Sc2ySwM_368.186 Anthoceros agrestis HOM05D000252 ORTHO05D003750 4.4e-10 68.2 81 39.5
Pp3c22_17570 Physcomitrium patens HOM05D000252 ORTHO05D003750 4.4e-10 68.2 73 37.0
Pp3c11_570 Physcomitrium patens HOM05D000252 ORTHO05D003750 3.5e-07 58.5 80 31.2
A03p57490 Brassica napus HOM05D000252 ORTHO05D003750 3.8e-06 55.1 39 61.5


User provided reference genes

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