Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 1.4e-287 992.3 511 100.0
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 2.8e-126 456.4 429 63.2
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 1.6e-113 414.1 530 48.1
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 6.0e-113 412.1 533 49.0
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 1.8e-109 400.6 505 51.1
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.6e-105 387.5 511 47.6
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 6.7e-104 382.1 506 48.0
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 3.7e-102 376.3 423 54.4
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 1.5e-100 370.9 393 54.5
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 2.0e-100 370.5 291 73.2
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 5.9e-100 369.0 512 46.3
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.9e-99 366.7 518 49.0
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 1.4e-98 364.4 511 45.8
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 2.5e-98 363.6 508 46.9
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 4.6e-97 359.4 399 53.4
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 2.8e-94 350.1 393 54.2
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.7e-94 349.7 508 46.1
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.8e-93 347.4 391 53.5
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 3.1e-93 346.7 395 52.2
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 9.1e-93 345.1 381 54.1
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 1.5e-92 344.4 395 53.4
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.0e-92 344.0 417 50.8
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 2.0e-92 344.0 398 53.0
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 5.9e-92 342.4 414 51.7
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 1.9e-90 337.4 406 51.2
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 1.9e-90 337.4 504 44.2
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 2.5e-90 337.0 406 51.5
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.5e-90 337.0 409 50.6
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 3.2e-90 336.7 399 54.6
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 9.4e-90 335.1 519 43.4
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 2.7e-89 333.6 403 51.6
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 3.9e-88 329.7 399 51.6
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 3.3e-87 326.6 417 51.1
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 5.7e-87 325.9 361 52.6
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 7.4e-87 325.5 403 51.4
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 2.4e-85 320.5 507 43.0
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.0e-84 317.4 405 47.7
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 2.6e-84 317.0 411 50.4
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.4e-84 316.6 439 48.7
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 7.7e-84 315.5 393 46.8
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 5.0e-83 312.8 525 41.0
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 3.2e-82 310.1 363 51.2
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 7.2e-82 308.9 507 41.6
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 3.6e-81 306.6 529 40.8
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 6.1e-81 305.8 407 47.4
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 3.0e-80 303.5 391 49.4
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 5.2e-80 302.8 377 48.0
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 1.1e-79 301.6 567 40.2
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.5e-79 301.2 379 49.1
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 9.7e-79 298.5 504 39.7
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 9.7e-79 298.5 360 50.6
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 9.7e-79 298.5 391 46.3
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 2.8e-78 297.0 407 45.2
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 2.4e-77 293.9 406 48.3
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 7.0e-77 292.4 412 46.8
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 1.6e-76 291.2 337 50.7
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 3.5e-76 290.0 410 44.1
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.0e-75 288.5 391 45.3
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 1.3e-75 288.1 409 47.7
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 1.7e-75 287.7 344 52.3
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 5.0e-75 286.2 506 40.5
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 6.5e-75 285.8 402 45.0
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 6.5e-75 285.8 397 45.6
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 2.3e-72 277.3 367 46.6
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 6.7e-72 275.8 346 50.9
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 1.5e-71 274.6 375 45.6
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 1.5e-71 274.6 242 59.5
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 4.4e-71 273.1 400 42.2
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 4.4e-71 273.1 270 57.4
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 9.7e-71 271.9 239 59.4
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 9.7e-71 271.9 235 60.9
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 2.2e-70 270.8 385 45.2
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 2.8e-70 270.4 351 47.3
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 4.8e-70 269.6 366 45.1
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.1e-69 268.5 379 44.6
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 1.1e-69 268.5 507 39.6
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.4e-69 268.1 301 51.8
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.2e-68 265.0 382 44.0
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.6e-68 264.6 376 44.7
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 2.7e-68 263.8 379 44.3
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 4.5e-68 263.1 373 44.8
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 1.0e-67 261.9 374 44.1
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 1.3e-67 261.5 385 44.4
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 1.3e-67 261.5 385 44.4
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 1.2e-65 255.0 313 47.6
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 8.0e-65 252.3 203 61.1
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 3.0e-64 250.4 273 54.2
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 5.2e-64 249.6 425 41.9
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 4.4e-63 246.5 368 43.2
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.2e-62 244.2 407 44.5
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 2.9e-59 233.8 407 38.3
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.0e-59 233.0 411 38.4
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 1.2e-57 228.4 338 41.4
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 4.7e-57 226.5 394 38.8
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.8e-56 224.6 408 36.5
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 1.2e-55 221.9 257 48.6
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 1.7e-54 218.0 373 39.1
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.2e-49 201.8 175 61.1
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 6.8e-48 196.1 265 43.4
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 4.9e-46 189.9 395 35.4
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.8e-45 188.0 242 42.6
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 2.4e-45 187.6 170 54.1
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 9.2e-45 185.7 126 69.0
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 1.7e-43 181.4 268 40.7
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.3e-43 181.0 124 70.2
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.1e-40 170.6 125 68.0
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 8.3e-38 162.5 445 30.3
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 1.6e-36 158.3 219 46.1
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.4e-32 145.2 226 44.7
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 1.6e-28 131.7 248 41.1
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 9.5e-26 122.5 119 52.1
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 1.2e-23 115.5 161 42.2
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 2.5e-18 97.8 107 44.9
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 1.5e-15 88.6 137 38.7
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 2.0e-15 88.2 76 61.8
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 1.3e-14 85.5 354 29.4
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 1.1e-13 82.4 246 30.1
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 1.6e-12 78.6 77 55.8
Atru.chr9.83 Acer truncatum HOM05D006487 ORTHO05D007982 2.8e-09 67.8 71 64.8
vmacro17743 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 8.1e-09 66.2 214 30.8
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 5.3e-08 63.5 119 36.1


User provided reference genes

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