Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 6.4e-106 387.5 205 100.0
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 5.5e-57 224.9 150 80.0
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 2.8e-53 212.6 140 80.7
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.0e-50 204.1 144 77.1
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 2.2e-50 203.0 141 78.7
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 8.5e-50 201.1 135 80.7
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 1.9e-49 199.9 133 80.5
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.5e-49 199.5 135 80.7
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 3.2e-49 199.1 135 80.0
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.2e-48 197.2 136 80.9
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.7e-48 196.1 207 56.5
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.7e-48 196.1 207 56.5
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 2.3e-47 193.0 143 72.7
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 3.0e-47 192.6 135 78.5
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 3.9e-47 192.2 141 74.5
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 2.6e-46 189.5 145 71.0
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 3.3e-46 189.1 144 70.1
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 9.7e-46 187.6 135 72.6
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 2.2e-45 186.4 144 69.4
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 2.8e-45 186.0 144 68.8
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 2.8e-45 186.0 144 70.1
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 3.7e-45 185.7 157 65.6
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 3.7e-45 185.7 144 68.1
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 3.7e-45 185.7 135 74.8
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 6.3e-45 184.9 141 68.8
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 6.3e-45 184.9 145 69.7
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 1.4e-44 183.7 134 77.6
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.8e-44 183.3 146 69.9
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 3.1e-44 182.6 141 66.7
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 3.1e-44 182.6 144 72.9
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 5.3e-44 181.8 141 70.9
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 6.9e-44 181.4 140 71.4
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 9.1e-44 181.0 146 66.4
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.2e-43 180.6 146 67.8
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 4.5e-43 178.7 156 67.3
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 5.9e-43 178.3 135 71.9
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 1.0e-42 177.6 136 72.1
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 1.7e-42 176.8 141 68.8
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 2.9e-42 176.0 139 66.2
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 3.8e-42 175.6 137 68.6
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 5.0e-42 175.3 144 68.1
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.5e-42 174.9 144 68.1
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.5e-42 174.5 143 67.8
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 8.5e-42 174.5 147 64.6
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.2e-41 172.6 133 67.7
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 4.2e-41 172.2 146 65.1
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 9.4e-41 171.0 133 66.9
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 9.4e-41 171.0 133 66.9
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 1.2e-40 170.6 137 68.6
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-40 169.5 143 67.1
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 4.7e-40 168.7 152 63.2
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 6.1e-40 168.3 132 70.5
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 7.9e-40 167.9 167 58.1
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 1.0e-39 167.5 132 70.5
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 1.0e-39 167.5 132 70.5
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.4e-39 167.2 132 67.4
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 4.4e-38 162.2 152 60.5
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 1.3e-37 160.6 135 65.2
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 1.7e-37 160.2 132 64.4
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 1.7e-37 160.2 132 68.2
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 3.7e-37 159.1 152 59.9
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 4.8e-37 158.7 154 62.3
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 6.3e-37 158.3 145 62.1
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.4e-36 157.1 152 60.5
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 1.8e-36 156.8 136 66.9
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 7.0e-36 154.8 142 62.0
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 7.0e-36 154.8 143 63.6
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 9.1e-36 154.5 146 60.3
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 4.5e-35 152.1 134 66.4
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 5.9e-35 151.8 154 57.8
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 1.7e-34 150.2 142 61.3
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.7e-34 150.2 141 60.3
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 2.9e-34 149.4 136 66.2
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 2.5e-33 146.4 135 60.7
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.5e-33 146.4 119 64.7
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 4.2e-33 145.6 136 58.8
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 5.5e-33 145.2 138 62.3
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 9.4e-33 144.4 86 80.2
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 9.4e-33 144.4 154 55.8
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.2e-32 144.1 141 58.9
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 1.2e-32 144.1 153 57.5
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 2.1e-32 143.3 156 55.1
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 8.0e-32 141.4 140 60.7
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.0e-31 141.0 152 53.3
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 4.0e-31 139.0 151 56.3
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 8.8e-31 137.9 135 62.2
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 2.6e-30 136.3 135 60.0
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 4.4e-30 135.6 135 59.3
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 4.4e-30 135.6 135 59.3
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 4.4e-30 135.6 135 59.3
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 4.4e-30 135.6 135 59.3
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 2.2e-29 133.3 136 60.3
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.4e-28 130.6 152 50.0
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.8e-28 130.2 151 53.6
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.2e-27 127.5 83 75.9
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.0e-26 124.4 144 54.2
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 1.1e-25 120.9 134 54.5
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 1.9e-25 120.2 169 49.7
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 7.2e-25 118.2 178 44.9
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 7.2e-25 118.2 147 48.3
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.1e-24 116.7 84 72.6
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.1e-24 116.7 84 72.6
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.7e-24 115.5 140 51.4
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.7e-24 115.5 140 50.7
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 8.0e-24 114.8 140 50.7
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 8.0e-24 114.8 171 46.8
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.0e-23 114.4 145 47.6
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-23 114.4 140 51.4
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.4e-23 114.0 140 50.7
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 1.8e-23 113.6 127 55.9
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.5e-22 110.5 135 51.1
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.7e-22 108.6 105 58.1
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 5.7e-22 108.6 140 49.3
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 9.8e-22 107.8 92 66.3
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 7.0e-20 101.7 71 76.1
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.2e-16 90.9 78 61.5
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 6.1e-16 88.6 83 53.0
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.0e-15 87.8 113 48.7
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 2.3e-15 86.7 120 46.7
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 2.0e-14 83.6 106 49.1
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 8.3e-13 78.2 44 84.1
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 7.0e-12 75.1 125 43.2
Haze_01753 Corylus avellana HOM05D006168 ORTHO05D007602 7.0e-12 75.1 52 80.8
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 1.9e-09 67.0 122 39.3
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 7.3e-09 65.1 52 71.2
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 2.3e-07 60.1 74 51.4
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 2.0e-06 57.0 111 41.4
PRCOL_00005394 Prasinoderma coloniale HOM05D006168 ORTHO05D007602 4.4e-06 55.8 110 39.1


User provided reference genes

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