Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 8.5e-191 670.2 355 100.0
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 8.5e-191 670.2 355 100.0
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 7.1e-145 517.7 355 78.6
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 2.6e-131 472.6 351 73.5
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 1.8e-127 459.9 350 73.1
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 3.9e-127 458.8 309 78.3
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 8.7e-127 457.6 355 72.1
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.6e-123 446.0 375 67.5
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 5.8e-123 444.9 360 68.9
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 6.4e-122 441.4 346 71.7
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 3.2e-121 439.1 293 77.5
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 7.1e-121 438.0 346 69.7
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 4.6e-120 435.3 320 71.2
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 3.0e-119 432.6 314 72.9
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 3.0e-119 432.6 360 69.7
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 3.0e-119 432.6 361 67.3
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 6.7e-119 431.4 314 72.6
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 1.1e-118 430.6 314 72.6
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 9.6e-118 427.6 347 67.1
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 1.3e-117 427.2 347 68.6
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 1.1e-116 424.1 355 66.8
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 1.8e-116 423.3 342 69.0
CiPaw.15G149500 Carya illinoinensis HOM05D007187 ORTHO05D009219 4.0e-116 422.2 311 76.8
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 5.3e-116 421.8 351 68.9
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 8.4e-114 414.5 350 66.0
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 1.1e-113 414.1 318 69.2
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 3.2e-113 412.5 320 70.0
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 3.5e-112 409.1 306 71.6
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 3.0e-111 406.0 298 71.5
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 3.9e-111 405.6 317 67.8
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 8.7e-111 404.4 393 62.1
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 1.1e-110 404.1 306 71.6
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 9.7e-110 401.0 354 64.1
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 4.8e-109 398.7 305 69.5
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 6.3e-109 398.3 317 68.5
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 1.8e-108 396.7 320 67.5
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 4.1e-108 395.6 333 64.9
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 4.1e-108 395.6 373 61.7
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 5.3e-108 395.2 342 63.7
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 1.2e-107 394.0 305 68.9
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 3.4e-107 392.5 349 62.8
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 4.5e-107 392.1 353 62.0
Dinv19316 Davidia involucrata HOM05D007187 ORTHO05D009219 7.7e-107 391.3 287 74.6
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 7.7e-107 391.3 342 62.6
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 2.9e-106 389.4 346 62.4
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 3.8e-106 389.0 358 63.1
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 5.0e-106 388.7 296 68.6
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 6.5e-106 388.3 291 70.4
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 1.1e-105 387.5 350 62.0
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 1.1e-105 387.5 349 62.2
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 1.4e-105 387.1 353 61.5
FvH4_5g17910 Fragaria vesca HOM05D007187 ORTHO05D009219 1.9e-105 386.7 312 69.2
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 2.5e-105 386.3 353 62.3
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 3.2e-105 386.0 353 61.5
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 7.2e-105 384.8 355 64.8
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 9.4e-105 384.4 329 66.3
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 1.2e-104 384.0 353 62.0
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 4.6e-104 382.1 292 70.2
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 2.3e-103 379.8 354 61.0
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 3.9e-103 379.0 354 60.7
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 2.0e-102 376.7 304 68.1
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 2.0e-102 376.7 335 62.4
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 7.4e-102 374.8 302 66.2
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 2.8e-101 372.9 302 65.2
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 1.1e-100 370.9 355 61.1
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.8e-100 370.2 334 61.7
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.8e-100 370.2 289 68.2
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 2.4e-100 369.8 319 63.9
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 6.9e-100 368.2 289 67.8
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 2.9e-98 362.8 316 63.9
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 4.4e-94 349.0 296 64.9
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 9.4e-89 331.3 230 75.7
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 1.2e-88 330.9 300 61.7
Lalb_Chr16g0386871 Lupinus albus HOM05D007187 ORTHO05D009219 6.1e-88 328.6 268 66.4
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 2.4e-84 316.6 266 63.2
Glyma.08G057000 Glycine max HOM05D007187 ORTHO05D009219 5.3e-84 315.5 257 65.4
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 9.1e-84 314.7 369 55.6
Potri.015G033200 Populus trichocarpa HOM05D007187 ORTHO05D009219 1.1e-76 291.2 226 67.7
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 3.2e-73 279.6 296 54.7
Sc10g0008990 Simmondsia chinensis HOM05D007187 ORTHO05D009219 3.0e-71 273.1 296 54.1
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 4.0e-71 272.7 296 51.7
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 2.8e-69 266.5 300 49.3
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 2.8e-69 266.5 304 53.6
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 1.1e-68 264.6 286 55.2
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 1.6e-64 250.8 308 47.7
Psat7g000640 Pisum sativum HOM05D007187 ORTHO05D009219 3.6e-64 249.6 206 62.1
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 6.1e-64 248.8 292 50.0
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 4.0e-63 246.1 299 50.2
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-59 234.6 303 44.9
FAN08G2087 Fragaria x ananassa HOM05D007187 ORTHO05D009219 6.1e-56 222.2 194 66.0
FAN18G0372 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.3e-55 220.3 192 66.1
Cpa.g.sc7.111 Carica papaya HOM05D007187 ORTHO05D009219 6.8e-55 218.8 186 67.7
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 4.4e-54 216.1 241 51.9
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 1.6e-48 197.6 237 50.6
Zm00001eb314540 Zea mays HOM05D007187 ORTHO05D009219 2.6e-46 190.3 228 49.1
CARHR066500 Cardamine hirsuta HOM05D007187 ORTHO05D009219 5.4e-44 182.6 139 67.6
Os09g0448900 Oryza sativa ssp. japonica HOM05D007187 ORTHO05D009219 5.8e-38 162.5 130 65.4
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 1.7e-34 151.0 298 39.6
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 1.4e-31 141.4 104 72.1
CDE11G1050 Ceratophyllum demersum HOM05D007187 ORTHO05D009219 1.2e-30 138.3 94 73.4
MSTRG.10866 Avicennia marina HOM05D007187 ORTHO05D009219 4.3e-25 119.8 103 64.1
Aqoxy3G04295 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 6.9e-23 112.5 103 61.2
Cpa.g.sc7.112 Carica papaya HOM05D007187 ORTHO05D009219 1.4e-20 104.8 89 62.9
Cre09.g407450 Chlamydomonas reinhardtii HOM05D007187 ORTHO05D009219 1.7e-18 97.8 412 24.5
Aqoxy3G04293 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 3.9e-18 96.7 90 60.0
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 1.5e-17 94.7 110 49.1
RcHm_v2.0_Chr6g0283931 Rosa chinensis HOM05D007187 ORTHO05D009219 2.4e-12 77.4 75 60.0
A07p29800 Brassica napus HOM05D007187 ORTHO05D040946 3.7e-08 63.5 74 55.4
PRCOL_00002241 Prasinoderma coloniale HOM05D007187 ORTHO05D009219 3.7e-08 63.5 299 27.8
Lsat_1_v5_gn_3_52400 Lactuca sativa HOM05D007187 ORTHO05D009219 7.6e-06 55.8 30 90.0
Lsat_1_v5_gn_7_15721 Lactuca sativa HOM05D007187 ORTHO05D009219 1.0e-05 55.5 31 87.1


User provided reference genes

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