Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p032161 Quercus lobata HOM05D002753 ORTHO05D003097 1.4e-37 159.1 78 100.0
QL10p032039 Quercus lobata HOM05D002753 ORTHO05D003097 1.6e-28 129.0 64 96.9
Dinv30988 Davidia involucrata HOM05D002753 ORTHO05D003097 4.0e-24 114.4 64 84.4
CiPaw.16G101300 Carya illinoinensis HOM05D002753 ORTHO05D003097 8.8e-24 113.2 63 84.1
FAN08G1509 Fragaria x ananassa HOM05D002753 ORTHO05D003097 1.2e-23 112.8 68 80.9
FAN13G0967 Fragaria x ananassa HOM05D002753 ORTHO05D003097 1.2e-23 112.8 68 80.9
Prupe.5G241200 Prunus persica HOM05D002753 ORTHO05D003097 1.2e-23 112.8 68 80.9
Atru.BG.196.p Acer truncatum HOM05D002753 ORTHO05D003097 2.6e-23 111.7 66 80.3
Potri.015G030300 Populus trichocarpa HOM05D002753 ORTHO05D003097 3.4e-23 111.3 68 76.5
Lalb_Chr24g0398461 Lupinus albus HOM05D002753 ORTHO05D003097 9.8e-23 109.8 68 77.9
Haze_18994 Corylus avellana HOM05D002753 ORTHO05D003097 1.3e-22 109.4 64 84.4
FvH4_5g18120 Fragaria vesca HOM05D002753 ORTHO05D003097 1.3e-22 109.4 68 79.4
Lj2g0022789 Lotus japonicus HOM05D002753 ORTHO05D003097 1.3e-22 109.4 68 79.4
Cfa020691 Carpinus fangiana HOM05D002753 ORTHO05D003097 1.7e-22 109.0 72 75.0
Cc04_g08920 Coffea canephora HOM05D002753 ORTHO05D003097 1.7e-22 109.0 72 70.8
TAR629G1083 Trochodendron aralioides HOM05D002753 ORTHO05D003097 1.7e-22 109.0 60 86.7
Ciclev10021011m.g Citrus clementina HOM05D002753 ORTHO05D003097 2.8e-22 108.2 68 77.9
Eucgr.H00613 Eucalyptus grandis HOM05D002753 ORTHO05D003097 4.9e-22 107.5 60 83.3
FAN18G3210 Fragaria x ananassa HOM05D002753 ORTHO05D003097 4.9e-22 107.5 68 79.4
MD06G1236700 Malus domestica HOM05D002753 ORTHO05D003097 4.9e-22 107.5 68 77.9
Sc11g0007040 Simmondsia chinensis HOM05D002753 ORTHO05D003097 4.9e-22 107.5 71 70.4
TPR.G24091 Trifolium pratense HOM05D002753 ORTHO05D003097 4.9e-22 107.5 68 77.9
Ca_18567_v3 Cicer arietinum L. HOM05D002753 ORTHO05D003097 1.1e-21 106.3 68 77.9
Manes.02G220100 Manihot esculenta HOM05D002753 ORTHO05D003097 1.1e-21 106.3 63 79.4
Sabra15G0025300 Salix brachista HOM05D002753 ORTHO05D003097 1.1e-21 106.3 73 68.5
Cpa.g.sc21.59 Carica papaya HOM05D002753 ORTHO05D003097 1.8e-21 105.5 71 74.6
MELO3C001960.2 Cucumis melo HOM05D002753 ORTHO05D003097 1.8e-21 105.5 68 75.0
CsaV3_1G005210 Cucumis sativus L. HOM05D002753 ORTHO05D003097 1.8e-21 105.5 60 81.7
Glyma.16G217500 Glycine max HOM05D002753 ORTHO05D003097 1.8e-21 105.5 60 83.3
Phvul.004G143000 Phaseolus vulgaris HOM05D002753 ORTHO05D003097 1.8e-21 105.5 68 73.5
RcHm_v2.0_Chr7g0177491 Rosa chinensis HOM05D002753 ORTHO05D003097 1.8e-21 105.5 68 77.9
arahy.Tifrunner.gnm1.ann1.305BSH Arachis hypogaea HOM05D002753 ORTHO05D003097 2.4e-21 105.1 68 73.5
arahy.Tifrunner.gnm1.ann1.V6QG6Q Arachis hypogaea HOM05D002753 ORTHO05D003097 2.4e-21 105.1 68 73.5
Medtr6g477880 Medicago truncatula HOM05D002753 ORTHO05D003097 3.1e-21 104.8 68 75.0
Ah.05g175110 Amaranthus hybridus HOM05D002753 ORTHO05D003097 4.1e-21 104.4 72 65.3
CANSAT01G0744 Cannabis sativa HOM05D002753 ORTHO05D003097 4.1e-21 104.4 68 76.5
Actinidia18878 Actinidia chinensis HOM05D002753 ORTHO05D003097 5.4e-21 104.0 62 80.6
Migut.O00244 Erythranthe guttata HOM05D002753 ORTHO05D003097 7.0e-21 103.6 63 74.6
GSVIVG01029393001 Vitis vinifera HOM05D002753 ORTHO05D003097 7.0e-21 103.6 64 78.1
Aqoxy3G04117 Aquilegia oxysepala HOM05D002753 ORTHO05D003097 9.1e-21 103.2 59 81.4
Lj5C165G25 Lonicera japonica HOM05D002753 ORTHO05D003097 1.2e-20 102.8 63 76.2
MSTRG.23204 Avicennia marina HOM05D002753 ORTHO05D003097 1.6e-20 102.4 63 74.6
HanXRQChr14g0428031 Helianthus annuus HOM05D002753 ORTHO05D003097 1.6e-20 102.4 60 80.0
Nn3g18508 Nelumbo nucifera HOM05D002753 ORTHO05D003097 1.6e-20 102.4 68 72.1
Nitab4.5_0001180g0020 Nicotiana tabacum HOM05D002753 ORTHO05D003097 2.0e-20 102.1 60 78.3
Oeu013927.4 Olea europaea HOM05D002753 ORTHO05D003097 2.0e-20 102.1 59 79.7
VMungo0464G0886 Vigna mungo HOM05D002753 ORTHO05D003097 2.0e-20 102.1 68 72.1
Carub.0001s4252 Capsella rubella HOM05D002753 ORTHO05D003097 2.7e-20 101.7 71 71.8
MBI08_g09789_MAGBIO Magnolia biondii HOM05D002753 ORTHO05D003097 3.5e-20 101.3 67 74.6
PSO063G3843 Papaver somniferum HOM05D002753 ORTHO05D003097 3.5e-20 101.3 68 73.5
EL10Ac1g00940 Beta vulgaris HOM05D002753 ORTHO05D003097 4.5e-20 100.9 71 67.6
Nitab4.5_0005200g0050 Nicotiana tabacum HOM05D002753 ORTHO05D003097 5.9e-20 100.5 60 76.7
Sp1g39920 Schrenkiella parvula HOM05D002753 ORTHO05D003097 5.9e-20 100.5 72 69.4
TWI81G0128 Tripterygium wilfordii HOM05D002753 ORTHO05D003097 5.9e-20 100.5 60 78.3
Psat1g031520 Pisum sativum HOM05D002753 ORTHO05D003097 1.0e-19 99.8 68 73.5
Zm00001eb250910 Zea mays HOM05D002753 ORTHO05D003097 1.0e-19 99.8 60 75.0
AUR62004230 Chenopodium quinoa HOM05D002753 ORTHO05D003097 1.3e-19 99.4 71 64.8
ClCG04G012490 Citrullus lanatus HOM05D002753 ORTHO05D003097 1.7e-19 99.0 68 72.1
PSO782G0438 Papaver somniferum HOM05D002753 ORTHO05D003097 1.7e-19 99.0 60 78.3
DCAR_010212 Daucus carota HOM05D002753 ORTHO05D003097 2.3e-19 98.6 62 72.6
BcaB04g17086 Brassica carinata HOM05D002753 ORTHO05D003097 2.9e-19 98.2 72 68.1
AL1G61830 Arabidopsis lyrata HOM05D002753 ORTHO05D003097 3.8e-19 97.8 75 65.3
BraA08t32215Z Brassica rapa HOM05D002753 ORTHO05D003097 3.8e-19 97.8 72 69.4
AUR62013618 Chenopodium quinoa HOM05D002753 ORTHO05D003097 3.8e-19 97.8 71 63.4
Peaxi162Scf00171g00065 Petunia axillaris HOM05D002753 ORTHO05D003097 3.8e-19 97.8 60 76.7
AT1G53345 Arabidopsis thaliana HOM05D002753 ORTHO05D003097 5.0e-19 97.4 68 70.6
CAN.G637.18 Capsicum annuum HOM05D002753 ORTHO05D003097 5.0e-19 97.4 60 73.3
SalBow5G2867 Salvia bowleyana HOM05D002753 ORTHO05D003097 5.0e-19 97.4 63 73.0
CARHR043570 Cardamine hirsuta HOM05D002753 ORTHO05D003097 6.6e-19 97.1 68 72.1
SGA_v2.0_scaffold90G27771 Striga asiatica HOM05D002753 ORTHO05D003097 6.6e-19 97.1 60 78.3
Lsat_1_v5_gn_2_5161 Lactuca sativa HOM05D002753 ORTHO05D003097 8.6e-19 96.7 62 71.0
BcaB02g10949 Brassica carinata HOM05D002753 ORTHO05D003097 1.1e-18 96.3 68 70.6
A08p01620 Brassica napus HOM05D002753 ORTHO05D003097 1.1e-18 96.3 72 68.1
PGSC0003DMG400031039 Solanum tuberosum HOM05D002753 ORTHO05D003097 1.1e-18 96.3 72 62.5
Aa31LG10G1790 Aethionema arabicum HOM05D002753 ORTHO05D003097 1.5e-18 95.9 68 72.1
THA.LOC104810434 Tarenaya hassleriana HOM05D002753 ORTHO05D003097 1.5e-18 95.9 71 70.4
Thhalv10011996m.g Eutrema salsugineum HOM05D002753 ORTHO05D003097 1.9e-18 95.5 67 71.6
ATR0807G174 Amborella trichopoda HOM05D002753 ORTHO05D003097 2.5e-18 95.1 60 75.0
PGR083G2063 Punica granatum HOM05D002753 ORTHO05D003097 2.5e-18 95.1 59 76.3
Sopen03g028880 Solanum pennellii HOM05D002753 ORTHO05D003097 2.5e-18 95.1 68 64.7
Solyc03g098180.3 Solanum lycopersicum HOM05D002753 ORTHO05D003097 3.3e-18 94.7 68 64.7
ECA238G0832 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-18 94.4 59 74.6
SalBow5G3512 Salvia bowleyana HOM05D002753 ORTHO05D003097 4.2e-18 94.4 61 73.8
FAN04G0651 Fragaria x ananassa HOM05D002753 ORTHO05D003097 5.5e-18 94.0 50 88.0
SalBow5G1094 Salvia bowleyana HOM05D002753 ORTHO05D003097 1.2e-17 92.8 60 73.3
BcaC01g01385 Brassica carinata HOM05D002753 ORTHO05D003097 1.6e-17 92.4 72 65.3
Sed0002549 Sechium edule HOM05D002753 ORTHO05D003097 1.6e-17 92.4 73 61.6
unitig_0.g1399 Utricularia gibba HOM05D002753 ORTHO05D003097 1.6e-17 92.4 63 65.1
A05p18370 Brassica napus HOM05D002753 ORTHO05D003097 2.1e-17 92.0 63 73.0
BraA05t20727Z Brassica rapa HOM05D002753 ORTHO05D003097 4.7e-17 90.9 63 71.4
CDE05G2206 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 1.4e-16 89.4 58 72.4
Cc03_g14400 Coffea canephora HOM05D002753 ORTHO05D003097 4.4e-15 84.3 52 73.1
SEGI_22169 Sequoiadendron giganteum HOM05D002753 ORTHO05D003097 9.8e-15 83.2 59 64.4
A08p01600 Brassica napus HOM05D002753 ORTHO05D003097 4.6e-12 74.3 58 67.2
BraA08t32213Z Brassica rapa HOM05D002753 ORTHO05D003097 4.6e-12 74.3 58 67.2
SMO352G0025 Selaginella moellendorffii HOM05D002753 ORTHO05D003097 1.7e-11 72.4 57 63.2
AagrBONN_evm.TU.Sc2ySwM_117.2467 Anthoceros agrestis HOM05D002753 ORTHO05D003097 1.1e-10 69.7 63 54.0
Pp3c4_5290 Physcomitrium patens HOM05D002753 ORTHO05D003097 1.5e-10 69.3 59 61.0
CBR_g4381 Chara braunii HOM05D002753 ORTHO05D000002 3.3e-10 68.2 60 55.0
MD14G1243600 Malus domestica HOM05D002753 ORTHO05D003097 2.1e-09 65.5 37 86.5
C03p91450 Brassica napus HOM05D002753 ORTHO05D003097 1.3e-06 56.2 72 45.8
BolC3t21463H Brassica oleracea HOM05D002753 ORTHO05D003097 1.3e-06 56.2 72 45.8
SEGI_35693 Sequoiadendron giganteum HOM05D002753 ORTHO05D003097 1.3e-06 56.2 58 55.2


User provided reference genes

Program Settings