Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 2.2e-104 382.5 224 100.0
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 1.6e-97 359.8 232 89.7
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 3.5e-89 332.0 233 84.5
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.3e-85 319.3 232 80.6
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 6.6e-80 301.2 227 72.2
QL04p003256 Quercus lobata HOM05D019990 ORTHO05D007789 5.5e-26 122.1 153 50.3
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-15 85.5 128 42.2
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-15 85.5 128 42.2
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-15 85.5 126 40.5
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.6e-14 84.0 127 40.9
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-14 82.8 127 42.5
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-14 81.6 128 42.2
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.1e-13 81.3 125 38.4
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.4e-13 80.1 127 40.9
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 3.1e-13 79.7 113 38.9
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 3.1e-13 79.7 119 39.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.1e-13 79.3 116 40.5
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.1e-13 79.3 127 40.9
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.9e-13 78.6 127 38.6
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.9e-13 78.6 127 37.0
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 6.9e-13 78.6 137 38.7
Thecc.01G408800 Theobroma cacao HOM05D008623 ORTHO05D007789 2.0e-12 77.0 102 41.2
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 4.5e-12 75.9 112 38.4
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.5e-12 75.9 121 40.5
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.9e-12 75.5 127 40.2
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 5.9e-12 75.5 119 37.8
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 7.7e-12 75.1 112 39.3
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 1.3e-11 74.3 120 37.5
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.3e-11 74.3 147 33.3
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 2.2e-11 73.6 146 38.4
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 3.8e-11 72.8 112 38.4
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 5.0e-11 72.4 127 38.6
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 1.1e-10 71.2 112 37.5
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 1.1e-10 71.2 131 33.6
arahy.Tifrunner.gnm1.ann1.W55X99 Arachis hypogaea HOM05D010841 ORTHO05D007789 1.4e-10 70.9 110 37.3
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 1.9e-10 70.5 111 39.6
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 1.9e-10 70.5 122 36.1
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-10 69.3 120 39.2
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 4.2e-10 69.3 119 34.5
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.5e-10 68.9 121 39.7
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.6e-09 67.4 124 37.9
A09p13520 Brassica napus HOM05D007210 ORTHO05D006152 2.7e-09 66.6 144 34.0
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.7e-09 66.6 117 38.5
Dinv25408 Davidia involucrata HOM05D000519 ORTHO05D035051 2.7e-09 66.6 105 37.1
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 3.6e-09 66.2 136 33.8
PGSC0003DMG402028118 Solanum tuberosum HOM05D001907 ORTHO05D015557 3.6e-09 66.2 118 36.4
BraA09t37003Z Brassica rapa HOM05D007210 ORTHO05D006152 1.0e-08 64.7 141 33.3
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 1.0e-08 64.7 138 33.3
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 1.0e-08 64.7 127 34.6
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 1.4e-08 64.3 104 36.5
arahy.Tifrunner.gnm1.ann1.82LERJ Arachis hypogaea HOM05D010841 ORTHO05D007789 2.3e-08 63.5 119 32.8
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 3.0e-08 63.2 133 36.8
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.9e-08 62.8 108 37.0
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 3.9e-08 62.8 121 35.5
DCAR_007960 Daucus carota HOM05D014660 ORTHO05D016977 5.1e-08 62.4 119 37.0
arahy.Tifrunner.gnm1.ann1.U7E3JB Arachis hypogaea HOM05D010841 ORTHO05D007789 6.7e-08 62.0 111 35.1
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 6.7e-08 62.0 114 37.7
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 8.8e-08 61.6 140 34.3
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 1.1e-07 61.2 112 39.3
BcaNung03123 Brassica carinata HOM05D002666 ORTHO05D004769 1.5e-07 60.8 111 37.8
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-07 60.5 111 36.9
BcaB08g36043 Brassica carinata HOM05D007210 ORTHO05D006152 2.0e-07 60.5 126 35.7
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.0e-07 60.5 135 28.9
BcaC05g24442 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-07 60.1 120 31.7
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 2.6e-07 60.1 154 31.2
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 2.6e-07 60.1 154 31.2
BraA08t32080Z Brassica rapa HOM05D007210 ORTHO05D006152 2.6e-07 60.1 153 31.4
BcaNung03124 Brassica carinata HOM05D002666 ORTHO05D004769 3.3e-07 59.7 142 35.2
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.3e-07 59.7 139 34.5
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.3e-07 59.7 139 34.5
A01p06820 Brassica napus HOM05D002666 ORTHO05D004769 4.4e-07 59.3 152 32.9
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 4.4e-07 59.3 109 35.8
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 5.7e-07 58.9 96 37.5
Lj1A773T41 Lonicera japonica HOM05D011954 ORTHO05D014236 7.4e-07 58.5 125 31.2
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 7.4e-07 58.5 135 28.9
DCAR_019885 Daucus carota HOM05D014660 ORTHO05D016977 9.7e-07 58.2 151 29.8
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 9.7e-07 58.2 88 44.3
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 9.7e-07 58.2 129 35.7
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-06 57.8 112 37.5
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-06 57.8 112 37.5
BraA01t00634Z Brassica rapa HOM05D002666 ORTHO05D004769 1.3e-06 57.8 121 36.4
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-06 57.8 77 45.5
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 1.3e-06 57.8 109 37.6
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.3e-06 57.8 110 32.7
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.7e-06 57.4 120 34.2
arahy.Tifrunner.gnm1.ann1.G2WS8B Arachis hypogaea HOM05D010841 ORTHO05D007789 1.7e-06 57.4 112 37.5
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 1.7e-06 57.4 112 36.6
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 1.7e-06 57.4 128 31.2
arahy.Tifrunner.gnm1.ann1.IT7CRT Arachis hypogaea HOM05D010841 ORTHO05D007789 2.2e-06 57.0 112 37.5
arahy.Tifrunner.gnm1.ann1.UYW4TV Arachis hypogaea HOM05D010841 ORTHO05D007789 2.2e-06 57.0 112 36.6
A07p12710 Brassica napus HOM05D008885 ORTHO05D006152 2.2e-06 57.0 124 35.5
arahy.Tifrunner.gnm1.ann1.M6PJBU Arachis hypogaea HOM05D010841 ORTHO05D007789 2.8e-06 56.6 123 31.7
arahy.Tifrunner.gnm1.ann1.VD3B34 Arachis hypogaea HOM05D010841 ORTHO05D007789 2.8e-06 56.6 119 32.8
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 2.8e-06 56.6 109 36.7
Carub.0007s2602 Capsella rubella HOM05D008242 ORTHO05D012602 2.8e-06 56.6 121 32.2
DCAR_027027 Daucus carota HOM05D014660 ORTHO05D016977 2.8e-06 56.6 148 33.8
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 3.7e-06 56.2 114 34.2
Lj7A643T21 Lonicera japonica HOM05D019260 ORTHO05D022860 3.7e-06 56.2 79 40.5
BcaNung06875 Brassica carinata HOM05D007210 ORTHO05D006152 4.8e-06 55.8 122 34.4
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 4.8e-06 55.8 70 45.7
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.8e-06 55.8 135 27.4
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.8e-06 55.8 110 35.5
C05p03140 Brassica napus HOM05D007210 ORTHO05D006152 6.3e-06 55.5 121 30.6
BraA07t29049Z Brassica rapa HOM05D008885 ORTHO05D006152 8.2e-06 55.1 124 34.7
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 8.2e-06 55.1 133 29.3


User provided reference genes

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