Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 6.5e-227 790.4 406 100.0
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 3.5e-140 502.3 298 88.3
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.8e-126 455.7 298 79.2
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 8.4e-118 427.9 298 74.2
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 4.2e-117 425.6 298 71.5
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 9.3e-117 424.5 297 72.4
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.1e-116 423.3 298 71.8
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.8e-115 420.2 296 70.6
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.8e-115 420.2 296 70.6
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.0e-115 419.5 296 70.3
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.9e-115 419.1 298 72.1
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 5.1e-115 418.7 297 71.0
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 6.7e-115 418.3 304 71.1
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 6.7e-115 418.3 298 71.8
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.5e-114 416.4 298 72.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.3e-114 416.0 298 72.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 5.7e-114 415.2 298 69.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 7.4e-114 414.8 296 70.6
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.3e-113 414.1 298 70.1
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-113 413.7 298 70.8
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.6e-113 413.7 296 69.3
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.8e-113 412.9 298 70.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 3.7e-113 412.5 291 72.2
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 3.7e-113 412.5 298 70.5
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 8.2e-113 411.4 301 70.8
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 8.2e-113 411.4 296 69.9
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 8.2e-113 411.4 298 69.8
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.1e-112 411.0 296 69.6
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.1e-112 409.5 298 69.1
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 3.1e-112 409.5 300 69.7
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 6.9e-112 408.3 299 69.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 7.7e-111 404.8 298 69.5
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-110 404.4 299 69.2
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 1.3e-110 404.1 298 69.8
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.9e-110 402.9 298 69.1
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.9e-109 400.2 298 69.8
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 4.2e-109 399.1 298 69.5
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 5.5e-109 398.7 298 69.1
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 3.6e-108 396.0 298 66.4
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 7.9e-108 394.8 298 66.4
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.3e-107 393.3 296 67.9
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 3.0e-107 392.9 298 65.8
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 6.7e-107 391.7 298 64.8
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 8.8e-107 391.3 297 66.7
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.5e-106 390.6 298 66.1
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 5.7e-106 388.7 297 64.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 9.7e-106 387.9 297 64.3
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.3e-105 387.5 298 66.8
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.3e-105 387.5 298 65.1
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.2e-105 386.7 297 64.0
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 3.7e-105 386.0 298 64.8
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 8.2e-105 384.8 298 63.8
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-104 384.4 341 61.3
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.1e-104 384.4 298 64.1
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.1e-104 384.4 292 68.2
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 2.4e-104 383.3 297 64.3
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 2.4e-104 383.3 297 64.3
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 2.4e-104 383.3 297 63.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 3.1e-104 382.9 298 65.8
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 4.1e-104 382.5 297 64.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 5.3e-104 382.1 318 64.2
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 6.9e-104 381.7 305 63.6
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.5e-103 380.6 297 64.0
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.5e-103 380.6 297 63.3
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.5e-103 379.0 296 63.2
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.5e-103 379.0 292 65.8
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 7.7e-103 378.3 299 64.2
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.7e-102 377.1 297 65.3
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.7e-102 377.1 298 67.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 2.9e-102 376.3 297 63.3
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 5.0e-102 375.6 303 62.7
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.5e-101 373.2 300 64.3
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.5e-101 373.2 298 62.8
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 4.7e-100 369.0 298 62.4
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 6.1e-100 368.6 298 61.7
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-99 367.9 298 65.4
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 8.8e-99 364.8 265 71.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.2e-97 360.1 265 70.6
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.1e-96 357.8 277 64.3
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 2.4e-96 356.7 277 66.8
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 9.1e-96 354.8 298 60.4
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.9e-94 349.7 263 69.2
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 5.2e-91 339.0 298 59.7
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 3.7e-89 332.8 298 58.1
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.3e-81 307.8 299 56.5
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.6e-79 300.8 263 62.0
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.6e-79 300.8 263 62.0
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.7e-76 290.0 298 47.3
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 6.8e-75 285.4 228 63.2
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 7.5e-74 282.0 233 61.4
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.8e-72 277.3 298 44.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 3.1e-72 276.6 215 67.9
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.6e-68 263.1 182 69.2
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.2e-66 258.1 298 44.0
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.0e-66 257.3 298 44.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.6e-63 247.7 188 64.9
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 3.5e-63 246.5 287 47.4
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 7.8e-63 245.4 299 46.5
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.6e-60 237.7 197 61.4
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 6.1e-60 235.7 169 72.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.2e-58 231.5 153 71.9
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.5e-58 231.1 265 52.5
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.4e-56 222.6 303 37.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 3.5e-55 219.9 139 77.7
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 4.4e-50 203.0 301 38.9
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.2e-44 184.9 149 63.1
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 3.6e-44 183.3 151 62.3
QL05p041994 Quercus lobata HOM05D000233 ORTHO05D000020 1.8e-35 154.5 92 88.0
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.4e-34 150.2 127 63.0
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-28 131.3 97 67.0
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.4e-27 128.3 88 71.6
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.5e-23 113.6 92 62.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.3e-22 110.9 70 77.1
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 7.6e-18 95.9 162 36.4
Haze_06397 Corylus avellana HOM05D000233 ORTHO05D000020 3.3e-13 80.5 88 62.5
Cfa000514 Carpinus fangiana HOM05D000233 ORTHO05D000020 9.6e-13 79.0 88 60.2
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.2e-10 72.0 72 47.2
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 3.4e-10 70.5 79 51.9
CiPaw.09G062600 Carya illinoinensis HOM05D000233 ORTHO05D000020 8.4e-09 65.9 109 45.0
CANSAT35G0645 Cannabis sativa HOM05D000233 ORTHO05D000020 2.1e-07 61.2 111 42.3
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 3.0e-06 57.4 59 57.6
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 6.7e-06 56.2 40 62.5


User provided reference genes

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